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(-) Description

Title :  CRYSTAL STRUCTURE OF A PUTATIVE UNCHARACTERIZED PROTEIN FROM MYCOBACTERIUM TUBERCULOSIS
 
Authors :  Seattle Structural Genomics Center For Infectious Disease (S
Date :  23 Apr 14  (Deposition) - 18 Jun 14  (Release) - 18 Jun 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.95
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Seattle Structural Genoics For Infectious Disease, Mycobacterium Tuberculosis, Structural Genomics, Ssgcid, Seattle Structural Genomics Center For Infectious Disease, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Seattle Structural Genomics Center For Infectious Disease (Ssgcid), J. Abendroth, M. C. Clifton, D. Lorimer, T. E. Edwards
Crystal Structure Of A Putative Uncharacterized Protein Fro Mycobacterium Tuberculosis
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: MYTUD.18669.A.B1
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: MT3753
    Organism Scientific: MYCOBACTERIUM TUBERCULOSIS
    Organism Taxid: 83331
    Strain: H37RV

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 10)

Asymmetric/Biological Unit (2, 10)
No.NameCountTypeFull Name
11PE1Ligand/IonPENTAETHYLENE GLYCOL
2MSE9Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:103 , TRP A:105 , ASP A:114 , SER A:122 , ASP A:139 , MSE A:155 , ILE A:181 , ALA A:185 , ASN A:205BINDING SITE FOR RESIDUE 1PE A 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4Q6U)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Ala A:263 -Asp A:264

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4Q6U)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4Q6U)

(-) Exons   (0, 0)

(no "Exon" information available for 4Q6U)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:318
                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...........eeee......eeeee..eeeeeeehhhhh....hhhhhhhhhhhhhhhh..eeeeehhhheeeeeeeee.....eeeeeeeee............eeeeee....eee.hhhhhhhh............hhhhh........hhhhhhhhhhh.....eeeeeeeee.....eeeeeeeeeeeee.......eeeeeeeeee......hhhhhhhhhh.....eeeeee....eeeee.................eeeeeeee.....eeeeeeeeeeeeee..eeeeeeeee..hhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4q6u A  -5 HHHHHHmTHDWLLVETLGDEPAVVARGRELKKLVPITTFLRRSPYLAAVRTAIAETLQTGQSLTSITPKHDRVIRTEPVImTDGRmHGVQVWSGPTDAEPPDRPIPGPLKWDLTRGVATDTPESLTNSGKNPEVEITYGRAFAEDLPARELNPNETQVLAmAVKAKPGKTLCSIWDLTDWQGTPIRIGFVARSALEPGPNGRDHLVARAmNWRAETKVDDLAQRILIGLAQAGVHRALVDLKTWTLLKWLDQPCSFYDWRRSAADSASHVLRLPGHDVDWVPVHVTVNRIELEPDTFAGLVALRLPTDEELADAGLPK 339
                                  |  4        14        24        34        44        54        64        74|    |  84        94       104       114       124       134       144       154|      164       174       184       194       204      |219       229       239       249       259    || 291       301       311       321       331        
                                  1-MSE                                                                    75-MSE|                                                                        155-MSE                                          204-MSE211|                                            264|                                                    
                                                                                                                80-MSE                                                                                                                             217                                             287                                                    


Chain B from PDB  Type:PROTEIN  Length:324
                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eeee......eeeee..eeeeeeehhhhh....hhhhhhhhhhhhhhhh..eeeeehhh.eeeeeeeee.....eeeeeeeeee...........eeeeee....eee.hhhhhhhh............hhhhh........hhhhhhhhhhh.....eeeeeeeee.....eeeeeeeeeeeee.......eeeeeeeeee.......hhhhhhhhhh.....eeeee......eeee..........hhhhh.....hhhhh.....eeeeeeee.....eeeeeeeeeeeeee..eeeeeeeee..hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4q6u B   2 THDWLLVETLGDEPAVVARGRELKKLVPITTFLRRSPYLAAVRTAIAETLQTGQSLTSITPKHDRVIRTEPVImTDGRmHGVQVWSGPTDAEPPDRPIPGPLKWDLTRGVATDTPESLTNSGKNPEVEITYGRAFAEDLPARELNPNETQVLAmAVKAKPGKTLCSIWDLTDWQGTPIRIGFVARSALEPGPNGRDHLVARAmNWRAETKAVDDLAQRILIGLAQAGVHRALVDLKTWTLLKWLDQPCSFYDWRRSAADGPRLHPDDQHVIGSASHVLRLPGHDVDWVPVHVTVNRIELEPDTFAGLVALRLPTDEELADAGLP 338
                                    11        21        31        41        51        61        71   |    81        91       101       111       121       131       141       151   |   161       171       181       191       201  |    211||     225       235       245       255       265       275||     294       304       314       324       334    
                                                                                                    75-MSE|                                                                        155-MSE                                          204-MSE 212|                                                        276|                                                    
                                                                                                         80-MSE                                                                                                                              217                                                         286
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4Q6U)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4Q6U)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4Q6U)

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)

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