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(-) Description

Title :  STRUCTURE OF EXOMER BOUND TO ARF1.
 
Authors :  J. E. Paczkowski, J. C. Fromme
Date :  21 Apr 14  (Deposition) - 17 Sep 14  (Release) - 31 Dec 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.35
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1:  A,B,C,D,E,F  (1x)
Biol. Unit 2:  G,H,I,J,K,L  (1x)
Keywords :  Cargo Adaptor, Secretory Vesicle, Small Gtp-Ase Arf1-Binding, Trans- Golgi Network, Protein Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. E. Paczkowski, J. C. Fromme
Structural Basis For Membrane Binding And Remodeling By The Exomer Secretory Vesicle Cargo Adaptor.
Dev. Cell V. 30 610 2014
PubMed-ID: 25203211  |  Reference-DOI: 10.1016/J.DEVCEL.2014.07.014

(-) Compounds

Molecule 1 - CHS5P
    Chains: A, J, G, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: ROSETTA 2
    Expression System Taxid: 562
    Expression System Vector Type: PET-DUET-1
    Gene: CAL3, CHS5, L8543.18, R008_L12446, YLR330W
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE R008
    Organism Taxid: 1182966
    Strain: ATCC 204508 / S288C
    Synonym: PROTEIN CAL3
 
Molecule 2 - PROTEIN BCH1
    Chains: K, E, B, H
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: ROSETTA 2
    Expression System Taxid: 562
    Expression System Vector Type: PET-DUET-1
    Gene: BCH1, YMR237W, YM9959.19
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 559292
    Strain: ATCC 204508 / S288C
    Synonym: BUD7 AND CHS6 HOMOLOG 1
 
Molecule 3 - ADP-RIBOSYLATION FACTOR 1
    Chains: F, L, C, I
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21
    Expression System Taxid: 562
    Expression System Vector Type: PET28A
    Fragment: DELTA N-17 ARF1, UNP RESIDUES 18-181
    Gene: ARF1, YDL192W, D1244
    Mutation: YES
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 559292
    Strain: ATCC 204508 / S288C

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDEFGHIJKL
Biological Unit 1 (1x): ABCDEF      
Biological Unit 2 (1x):       GHIJKL

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 8)

Asymmetric Unit (2, 8)
No.NameCountTypeFull Name
1GNP4Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
2MG4Ligand/IonMAGNESIUM ION
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1GNP2Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
2MG-1Ligand/IonMAGNESIUM ION
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1GNP2Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
2MG-1Ligand/IonMAGNESIUM ION

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP F:26 , GLY F:27 , ALA F:28 , GLY F:29 , LYS F:30 , THR F:31 , THR F:32 , PRO F:47 , THR F:48 , GLY F:70 , ASN F:126 , LYS F:127 , ASP F:129 , LEU F:130 , CYS F:159 , ALA F:160 , THR F:161 , MG F:202BINDING SITE FOR RESIDUE GNP F 201
2AC2SOFTWARETHR F:31 , THR F:48 , ASP F:67 , GNP F:201BINDING SITE FOR RESIDUE MG F 202
3AC3SOFTWARELEU L:25 , ASP L:26 , GLY L:27 , ALA L:28 , GLY L:29 , LYS L:30 , THR L:31 , THR L:32 , THR L:45 , ILE L:46 , PRO L:47 , THR L:48 , GLY L:70 , ASN L:126 , LYS L:127 , CYS L:159 , ALA L:160 , MG L:202BINDING SITE FOR RESIDUE GNP L 201
4AC4SOFTWARETHR L:31 , THR L:48 , GNP L:201BINDING SITE FOR RESIDUE MG L 202
5AC5SOFTWARELEU C:25 , ASP C:26 , GLY C:27 , ALA C:28 , GLY C:29 , LYS C:30 , THR C:31 , THR C:32 , THR C:45 , ILE C:46 , PRO C:47 , THR C:48 , GLY C:70 , ASN C:126 , LYS C:127 , ASP C:129 , CYS C:159 , ALA C:160 , THR C:161 , MG C:202BINDING SITE FOR RESIDUE GNP C 201
6AC6SOFTWARETHR C:31 , THR C:48 , GNP C:201BINDING SITE FOR RESIDUE MG C 202
7AC7SOFTWARELEU I:25 , ASP I:26 , GLY I:27 , ALA I:28 , LYS I:30 , THR I:31 , THR I:32 , THR I:45 , PRO I:47 , THR I:48 , GLY I:70 , ASN I:126 , LYS I:127 , ASP I:129 , CYS I:159 , ALA I:160 , THR I:161 , MG I:202BINDING SITE FOR RESIDUE GNP I 201
8AC8SOFTWARETHR I:31 , THR I:48 , GNP I:201BINDING SITE FOR RESIDUE MG I 202

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4Q66)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric Unit
No.Residues
1Pro A:79 -Glu A:80
2Ala A:106 -Lys A:107
3Ala J:106 -Lys J:107
4Ala G:106 -Lys G:107
5Ala D:106 -Lys D:107
6Lys K:134 -Ile K:135

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4Q66)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4Q66)

(-) Exons   (0, 0)

(no "Exon" information available for 4Q66)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:226
                                                                                                                                                                                                                                                                  
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeee...eeeee.....eeeee.hhh........eeeeeeeehhhhhhhhhhhhhhhhhhhhhhh.........eeeeee....eeeee.........eeeeeee................eeee.......eeeeeeeeee..eeeeeeeeeee.......................................hhhhhhh................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4q66 A   2 SSVDVLLTVGKLDASLALLTTQDHHVIEFPTVLLPENVKAGSIIKMQVSQNLEEEKKQRNHFKSIQAKILEKYGTHKPESPVLKIVNVTQTSCVLAWDPLKLGSAKLKSLILYRKGIRSMVIPNPFKVTTTKISGLSVDTPYEFQLKLITTSGTLWSEKVILRTHKMTDMSGITVCLQRHVAIDTTHFVLIRAKHNNIPRPWVRACEVEKRIVGFYLDADQSTFPP 276
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171     ||207       229       241||     252  ||   265 ||   
                                                                                                                                                                                                         177|         216|      238|||        255|     267|   
                                                                                                                                                                                                          204          229       241||         259      273   
                                                                                                                                                                                                                                  242|                        
                                                                                                                                                                                                                                   244                        


Chain B from PDB  Type:PROTEIN  Length:507
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................ee...eee.....hhhhhhhhh..ee....ee..hhhhhhhhhhhhhhhhhhhhhhhhhh.......eee.......hhhhhhhhhhhhhh.hhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhh..............................hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4q66 B   3 SQTSIPEVQRRARVGQFDLGPDLIFFYCMGIDTSDPTSITIFASSWNAFRKYDVVNMIWAETFMSGIVRDIMIMKDNRADGESQNLVETLIFNPFTLEDVANNFIKLFPLVYEKGVYLDAPTHVNPSLTNNYLVETLVEIVRLTKSLEACRKMLKKLIEIHPEAVIILIRVYFACDLEIDAVDLINEQLNSPSSFLSHIQLIFKSELLSIQSEFLLDVKRDYKLAKEVAMEAVNCAPNEFKTWYLLTRIYIKLNDMSNALLSLNACPMSQVKEKYVLIAPILHLPLPLDLEQKSDPNLVNLSASSLKSTFQLAYKLLTEIVQITGWEQLLKYRSKIFVKRLCERWLDNLFMLLYEDLKTYTDWQSEKLTVEWELFGLCAKRLGHLPEAAKAFQIGLSQRFSPVCAKNLLQFYIDEHKRIRRDSVSTSSQILSSINDIDSSIIDLVVKICCWNHRWYIEFIILIDALSVAVQDMGKVHNEIASRFSDPVAQLIDDNILNFLKNFTNDT 721
                                   |22      ||33|  ||   96       106  ||   144   ||  194       204       214       224     ||237       247       257   ||  268       278       288       298       308       318       328     ||344       354       364       374       384       394       404       414      |426||     456   ||  467       477       487       497       534       544       554     ||576       586       596       606       616       626    || 641       651       661       672       682   ||  694       704       714       
                                  10|      29| || 38|               109|       148|                                      230|                        261|                                                                    334|                                                                             421|  ||    440| 460|                                        505|                        560|                                                       631|                              670|           686|                                
                                   21       31 ||  91                138        189                                       234                         263                                                                     341                                                                              424  ||     456  462                                         533                         573                                                        637                               672            689                                
                                              33|                                                                                                                                                                                                                                                                 427|                                                                                                                                                                                                                                 
                                               35                                                                                                                                                                                                                                                                  433                                                                                                                                                                                                                                 


Chain C from PDB  Type:PROTEIN  Length:134
                                                                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee....hhhhhhhhhhh...........eeeee...eeeee..hhhhhhhhhhhh....eeeeee.....hhhhhhhhhh..hhhhh.eee........hhhhhhhhhh...ee........hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4q66 C  20 ILMVGLDGAGKTTVLYKLKLGEVITTIPTIGFNVETVSFTVWDVGGLDRIRSLWRHYYRNTGVIFVVDSNDRSRIGEAREVMQLNEDELRVFANKQDLPEAMSAAEITEKLGWFIQATCATSGEGLYEGLEWLS 174
                                    29        39        49      ||64        74        84||      95       105  ||   117|      132       142 ||    160       170    
                                                               56|                     85|                  108|   117|                  144|                     
                                                                62                      87                   111    123                   153                     


Chain D from PDB  Type:PROTEIN  Length:171
                                                                                                                                                                                                           
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee...eeeee.....eeeee.hhh........eeeeeeeehhhhhhhhhhhhhhhhhhhhhhh.........eeeeee....eeeee.........eeeeeee.............eeee......eeeeeeeeee..eeeeeeeeeee......hhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4q66 D   4 VDVLLTVGKLDASLALLTTQDHHVIEFPTVLLPENVKAGSIIKMQVSQNLEEEKKQRNHFKSIQAKILEKYGTHKPESPVLKIVNVTQTSCVLAWDPLKLGSAKLKSLILYRRSMVIPNPFKVTTTKISGLVDTPYEFQLKLITTSGTLWSEKVILRTHKMTHVRGFYLDA 264
                                    13        23        33        43        53        63        73        83        93       103       113 ||    126       136||     147       157       167 |||   263 
                                                                                                                                         115|               137|                           169||       
                                                                                                                                          119                139                            234|       
                                                                                                                                                                                             257       


Chain E from PDB  Type:PROTEIN  Length:557
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhhhh........ee...eee.....hhhhhhhhhhhhhh.........eeeee....eeeeee..eeeeee..hhhhhhhhhhhhhhhhhhhhhh............eee.hhhhh..hhhhhhhhhhhhh.hhhhhh............hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhh..................................hhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4q66 E   2 LSQTSIPEVKVIGYALHQRRARVGDLGPPDLIFFYCMGIDTSDPTSITIFAKKITDLFLDTPQISISSWNAFRKYDVNIIVVQTYIINSNVNMIWAETFMSGIVRDIMIMKDNRADGESQNLVETLIFNPFTSGDVANNFIKLFPLVYEKGVYLDAPTHVLNPSLTNNYLVETLVEIVRLTKSLEACRKMLKKLIEIHPEAVIILIRVYFACDLEIDAVDLINEQLNSPSSFLADTSHIQLIFKSELLSIQSEFLLDVKRDYKLAKEVAMEAVNCAPNEFKTWYLLTRIYIKLNDMSNALLSLNACPMSQVKEKYVLRAPILHLPLPNPMDVQLEQKSADPNLVNLSASSLKSTFQLAYKLLTEIVQITGWEQLLKYRSKIFVSKRLCERWLDNLFMLLYEDLKTYTDWQSEQLKLTVEWELFGLCAKRLGHLPEAAKAFQIGLSQRFSPVCAKNLLQFYIDEHKRIRRDSTSSQILSSINDIDSSIIDLVVKICCWNHRWYIEFSIILIDALSVAVQDMGITKVHNEIASRFSDPVAQLIDDNILNFLKNFTNDTF 722
                                    11|       23   ||   36 ||     98       108       118   ||  141       151||     188       198       208       218       228   ||  241       251       261       271       281       291       301       311       321       331    || 344       354       364       374       384       394       404       414       426||    |452       462       472       482       492       502  ||   538       548       558   ||  578       588       598       608       618       628||     645       655       665       675       685       695       705       715       
                                    11|           27|     38|                            122|             152|    165|                                         232|                                                                                                 336|                                                                               422| ||  438|                                                    505|                           562|                                                     629|                                                                                     
                                     14            31      91                             136              158     188                                          236                                                                                                  340                                                                                425 ||   450                                                     532                            573                                                      637                                                                                     
                                                                                                                                                                                                                                                                                                                                                          427|                                                                                                                                                                                                                                           
                                                                                                                                                                                                                                                                                                                                                           433                                                                                                                                                                                                                                           


Chain F from PDB  Type:PROTEIN  Length:146
                                                                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.....hhhhhhhhhh....eeeee.....eeeee.....hhhhhhhhh....eeeeeee.....hhhhhhhhhhhhh.hhhhh..eeeeeee........hhhhhhhhhhhhhh..eeeee........hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4q66 F  18 MRILMVGLDGAGKTTVLYKLKPTIGFNVETVQYKFTVWDVGGLDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQDLPEAMSAAEITEKLGLHSIRPWFIQATCATSGEGLYEGLEWLSNS 176
                                    27        37||      55   ||   68        78        88        98       108       118       128       138       148|      160       170      
                                               38|          59|                                                                                  148|                         
                                                47           63                                                                                   151                         


Chain G from PDB  Type:PROTEIN  Length:211
                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeee...eeeee.....eeeee.hhh........eeeeeeeehhhhhhhhhhhhhhhhhhhhhhh.......eeeeee....eeeee.......eeeeeee..............eeee.......eeeeeeeeee..eeeeeeeeeee.............hhhhhhhhhhh............hhhhhhhh....hhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4q66 G   3 SVDVLLTVGKLDASLALLTTQDHHVIEFPTVLLPENVKAGSIIKMQVSQNLEEEKKQRNHFKSIQAKILEKYGTPESPVLKIVNVTQTSCVLAWDPLKLAKLKSLILYRKGSMVIPNPFKVTTTKISGLSVDTPYEFQLKLITTSGTLWSEKVILRTHKMTDMSGITVSDLQISQCLSHIGAVAIDTTHFVELIRAKHNNIPIVRPEWVRA 247
                                    12        22        32        42        52        62        72   ||   84        94       106       116||     128       138       148       158       168       189       199 ||    215||     236       246 
                                                                                                    76|                     103|        117|                                                     176|          201|     216|                   
                                                                                                     79                      106         120                                                      188           208      228                   


Chain H from PDB  Type:PROTEIN  Length:338
                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhh.hhhhhhhhh....................hhhhh............hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh.hhhhhhh..hhhhh.hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh.hhhhhhhh..hhhhh...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4q66 H 189 VNMIWAETMSGIVRDIMIMKDNRADGESQNLNPFTSGKGVYLDAPTHVLNPSLTNNYLVETLEIVRLTKSLEACRKMLKLIEPEAVIILIRVYFACDLEIDAVDLINEQLTSHIQLIFKSELLSIQSEFLLDVKRDYKLAKEVAMEAVNCAPNEFKTWYLLTRIYIKLNDMSNALLSLNACPMSQVKSTFQLAYKLLTEIVQITGWEQLLKYRSKIFVKRLCERWLDNLFMLLYEDLKTYTDWQSFGLCAKRLGPEAAKASPVCAKNLLQFYIDEHKRIRSSINDIDSSIIDLVVKICCWNHFSIILIDALSVAVQGITKVHNEIAPVAQLIILTNDT 721
                                   199       209       219||    |253       263       273 ||    284       295 ||    307       317       327|      349       359       369       379       389       399       409      |477       487       497       534       544       554    || 585   ||  597|      616       626|      652       662 ||    677     ||689     ||704 ||||   
                                 196|                   220|  232|                     275|             293| ||                        327|                                                                         416|                           505|                       559|     589|  597|                626|                  664|          683|      695|  706|||   
                                  198                    227   251                      277              295 ||                         340                                                                          475                            533                        581      592   607                 643                   670           686       701   710||   
                                                                                                           297|                                                                                                                                                                                                                                                        711|   
                                                                                                            300                                                                                                                                                                                                                                                         718   


Chain I from PDB  Type:PROTEIN  Length:86
                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee.....hhhhhhhhh............hhhhhhhhhh.eeeee...hhhhh...eee....hhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------- Transcript
                 4q66 I  21 LMVGLDGAKTTVLYKLKLGVITTIPTGGLDRIRSLWRHYYVIFVVDSNREVMQRMLVFANKQDAAEITEKLGLATCATSGEGLYEG 169
                                   |31        42     || 72        82|      105     ||126  ||   142  ||   163      
                                  28|        40|    48|           82|     95|    111|   129|      145|            
                                   30         42     69            88     104     123    136       157            


Chain J from PDB  Type:PROTEIN  Length:158
                                                                                                                                                                                              
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee...eeeee.....eeeee.hhh........eeeeeeeehhhhhhhhhhhhhhhhhhhhhhh................eeee..........eeeeeee................eeee........eeeeeee...eeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4q66 J   4 VDVLLTVGKLDASLALLTTQDHHVIEFPTVLLPENVKAGSIIKMQVSQNLEEEKKQRNHFKSIQAKILEKYGTHKPESPVLIVNVTSCVLAWDPLKLGSAKLKSLILYRKGIRSMVIPNPFKVTTTKISGLSVDTEFQLKLITTSGTLWSEKVILRTH 166
                                    13        23        33        43        53        63        73        83||  ||  96       106       116       126       136    || 148       158        
                                                                                                           84| 89|                                              141|                      
                                                                                                            86  92                                               144                      


Chain K from PDB  Type:PROTEIN  Length:593
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......ee.....hhhhhhhhh...........ee...eee.....hhhhhhhhhhhhhh.....................eeeee....eeeeee...eeeeee............hhhhhhhhhhhhhhhhhhhhhhh............eee.hhhhh....hhhhhhhhhhhhhh.hhhhhh............hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhh............hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhh...................ee..................hhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4q66 K   3 SQTSIPEVKEDVIGYALHQRRARVGQFQDLGPPDLIFFYCMGIDTSDPTSITIFAKKITDLFLDTPQIWFGKKHFHVSKISISSWNAFRKYDVNIIVHVQTYIINSDGEQSQLPSVLNVNMIWAETFMSGIVRDIMIMKDNRADGESQNLVETLIFNPFTSGELEDVANNFIKLFPLVYEKGVYLDAPTHVLNPSLTNNYLVETLVEIVRLTKSLEACRKMLKKLIEIHPEAVIILIRVYFACDLEDAVDLINEQLNSPSSFLADTSHIQLIFKSELLSIQSEFLLDVKRDYKLAKEVAMEAVNCAPNEFKTWYLLTRIYIKLNDMSNALLSLNACPMSVKEKYVLRRIAPIENLHLPLPLDNPMDVQLEQKSADPNLVNLSASSLKSTFQLAYKLLTEIVQITGWEQLLKYRSKIFVMSKRLCERWLDNLFMLLYEDLKTYTDWQSEQLYFDAHKLTVEWELFGLCAKRLGHLPEAAKAFQIGLSQRFSPVCAKNLLQFYIDEHKRIRRDSLSSINDIDSSIIDLVVKICCWNHRWYIEFSIILIDALSVAVQDMGITKVHNEIASRFSDPVAQLIDDNILNFLKNFTNDTF 722
                                    12        22        32     || 94       104       114       124  ||   135       145       159       169     ||190       200       210       220       230       240       250       260       270       280       290       300       310     ||321       331    || 344       354       364       374       384       394       404       415       425 ||    438 ||    457       467       477       487       497       532       542       552       562   ||  577       587       597       607       617       627 ||    649       659       669       679       689       699       709       719   
                                                              38|                                 127|                     153|              175|                                                                                                                              316|               336|                                                                      413|         427|      440|                                                     506|                               566|                                                      629|                                                                                
                                                               91                                  129                      158               187                                                                                                                               318                340                                                                       415          431       450                                                      532                                572                                                       642                                                                                


Chain L from PDB  Type:PROTEIN  Length:139
                                                                                                                                                                           
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.....hhhhhhhhhhh........eeee...eeeee.....hhhhhhhhh....eeeeeee......hhhhhhhhhh...hhhhh..eeeeeee....hhhhhhhhh......eeeee....hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4q66 L  18 MRILMVGLDGAGKTTVLYKLKLGTTIPTIGFNVETVFTVWDVGGLDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKEAMSAAEITEKLLHSIRPWFIQATCAGLYEGLEWLSNS 176
                                    27        37  ||    50     || 66        76        86        96       106       116       126||     140  ||  |153      |167         
                                                 40|          56|                                                             127|        143|  ||      160|           
                                                  44           63                                                              132         145  ||       165           
                                                                                                                                              148|                     
                                                                                                                                               151
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  BCH1_YEAST | Q05029
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ARF1_YEAST | P11076: 2k5u 2ksq 3tjz 5a1u 5a1v 5a1w 5a1x 5a1y 5nzr 5nzs 5nzt 5nzu 5nzv
        BCH1_YEAST | Q05029: 4in3

(-) Related Entries Specified in the PDB File

4gns CHS5 COMPLEXED WITH CHS6.
4in3 CHS5 COMPLEXED WITH BCH1.