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(-) Description

Title :  CRYSTAL STRUCTURE OF LEUCINE-RICH REPEAT- AND COILED COIL-CONTAINING PROTEIN FROM LEGIONELLA PNEUMOPHILA
 
Authors :  Y. Kim, C. Hatzos-Skintges, R. Jedrzejczak, A. Joachimiak, Midwest C Structural Genomics (Mcsg), Program For The Characterization Secreted Effector Proteins (Pcsep)
Date :  20 Apr 14  (Deposition) - 07 May 14  (Release) - 07 May 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Structural Genomics, Psi-Biology, Midwest Center For Structural Genomics, Mcsg, Program For The Characterization Of Secreted Effector Proteins, Pcsep, Leucine-Rich Repeats, Coiled-Coil, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Kim, C. Hatzos-Skintges, R. Jedrzejczak, A. Joachimiak, Midwest Center For Structural Genomics (Mcsg)
Crystal Structure Of Leucine-Rich Repeat- And Coiled Coil-Containing Protein From Legionella Pneumophila
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - LEUCINE-RICH REPEAT-AND COILED COIL-CONTAINING PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG57
    Expression System Strain: BL21(DE3) GOLD
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: LEGLC8, LPG1890
    Mutation: YES
    Organism Scientific: LEGIONELLA PNEUMOPHILA SUBSP. PNEUMOPHILA
    Organism Taxid: 272624
    Strain: PHILADELPHIA 1

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 22)

Asymmetric Unit (3, 22)
No.NameCountTypeFull Name
1EDO10Ligand/Ion1,2-ETHANEDIOL
2MSE5Mod. Amino AcidSELENOMETHIONINE
3SO47Ligand/IonSULFATE ION
Biological Unit 1 (3, 44)
No.NameCountTypeFull Name
1EDO20Ligand/Ion1,2-ETHANEDIOL
2MSE10Mod. Amino AcidSELENOMETHIONINE
3SO414Ligand/IonSULFATE ION

(-) Sites  (17, 17)

Asymmetric Unit (17, 17)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLY A:197 , ASP A:198 , GLU A:199 , LYS A:245 , HOH A:656 , HOH A:672 , HOH A:837BINDING SITE FOR RESIDUE SO4 A 501
02AC2SOFTWARESER A:118 , ALA A:119 , SER A:120 , HIS A:370 , GLY A:372 , HOH A:629 , HOH A:657 , HOH A:691 , HOH A:739BINDING SITE FOR RESIDUE SO4 A 502
03AC3SOFTWARELYS A:246 , HOH A:662 , HOH A:675 , HOH A:699 , HOH A:808BINDING SITE FOR RESIDUE SO4 A 503
04AC4SOFTWAREGLU A:247 , TRP A:248 , GLY A:249 , LEU A:250 , LEU A:276 , EDO A:517BINDING SITE FOR RESIDUE SO4 A 504
05AC5SOFTWAREARG A:296 , ALA A:297 , LYS A:349 , HOH A:661BINDING SITE FOR RESIDUE SO4 A 505
06AC6SOFTWAREASP A:286 , LEU A:287 , ASN A:288 , ASN A:310 , ASP A:312BINDING SITE FOR RESIDUE SO4 A 506
07AC7SOFTWAREASN A:98 , THR A:374 , SER A:375 , ARG A:414 , HOH A:756BINDING SITE FOR RESIDUE SO4 A 507
08AC8SOFTWAREASN A:367 , LYS A:394 , GLY A:397 , HOH A:694BINDING SITE FOR RESIDUE EDO A 508
09AC9SOFTWAREHIS A:173 , GLN A:174 , ARG A:203 , HOH A:777BINDING SITE FOR RESIDUE EDO A 509
10BC1SOFTWAREASN A:140 , ARG A:168 , HOH A:652BINDING SITE FOR RESIDUE EDO A 510
11BC2SOFTWARETYR A:113 , ARG A:139 , HOH A:601BINDING SITE FOR RESIDUE EDO A 511
12BC3SOFTWARELYS A:321 , THR A:374 , ARG A:376 , HOH A:756BINDING SITE FOR RESIDUE EDO A 512
13BC4SOFTWARESER A:120 , ALA A:146 , ASN A:147 , TYR A:150 , ALA A:320 , LYS A:321BINDING SITE FOR RESIDUE EDO A 513
14BC5SOFTWAREARG A:296 , SER A:317 , ALA A:320 , GLU A:346BINDING SITE FOR RESIDUE EDO A 514
15BC6SOFTWARETHR A:54 , ASN A:57BINDING SITE FOR RESIDUE EDO A 515
16BC7SOFTWARELYS A:73 , ASP A:74 , LYS A:97 , GLN A:410 , HOH A:706BINDING SITE FOR RESIDUE EDO A 516
17BC8SOFTWAREASN A:270 , ASN A:272 , SO4 A:504BINDING SITE FOR RESIDUE EDO A 517

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4Q62)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4Q62)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4Q62)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4Q62)

(-) Exons   (0, 0)

(no "Exon" information available for 4Q62)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:391
                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee....hhhhhhhhhhhhhhhhhh......eee......hhhhhhhhhhhhh......eee......hhhhhhhhh......eee.................eee.......hhhhhhhhhhhhh....eee......hhhhhhhhhh.........eee......hhhhhhhhh......eee......hhhhhhhh........eee......hhhhhhhhhh....eee...hhhhhh..............eee......hhhhhhhhhhhh....eee......hhhhhhhhh......eee..........hhhhhhhhhhhhhhhh....eee......hhhhhhhhh...........ee..eehhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4q62 A   3 QHQVKLVLKTSQDIQLFLNALRDSRNHGISSLSELDLSDTRFTNQELSDLVTALNNIPGIKSLRLDSCGLKDSDTVELSKLTHIKKLSLKSNYLKNRPmFNSmLEALYLDYNTELSASYVLFSLSRNAAALKKLSLRNCGVTDANLEYLTRPESRLKSLTHFNLRRNNITHQGVDSFAHLQSLTTIDLSQNTGIGDEGVSRLAPLKQLRTLYLDNCGIGGEGIKAIAKmNLQTVDLSFNPGLKKEWGLDDIRPNHTIRTLLLTFCSLNDNHAKLIVSKFPAATDLNVANNNmTRAGVKTLLSNPIIENLDVSTQSLYAKQQEKEKAQDLLDTICNTITLKSINLEHTGITSRmLLSLIPDETDHKRYLKKINGVSCKELKPKLEQQIALRK 415
                                    12        22        32        42        52        62        72        82        92       102  |    112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292 |     302       312       344       354       364       374  |    384       394       404       414 
                                                                                                                            101-MSE                                                                                                                           231-MSE                                                        294-MSE                    321|                              377-MSE                                  
                                                                                                                                105-MSE                                                                                                                                                                                                                  344
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4Q62)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4Q62)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4Q62)

(-) Gene Ontology  (0, 0)

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    (no "Gene Ontology" information available for 4Q62)

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