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(-) Description

Title :  TRICHODERMA REESEI CUTINASE IN COMPLEX WITH A C11Y4 PHOSPHONATE INHIBITOR
 
Authors :  A. Roussel, S. Amara, A. Nyyssola, E. Mateos-Diaz, S. Blangy, H. Kontka A. Westerholm-Parvinen, F. Carriere, C. Cambillau
Date :  07 Mar 14  (Deposition) - 17 Sep 14  (Release) - 17 Dec 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.71
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Alpha/Beta Hydrolase, Hydrolase, Hydrolase-Hydrolase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Roussel, S. Amara, A. Nyyssola, E. Mateos-Diaz, S. Blangy, H. Kontkanen, A. Westerholm-Parvinen, F. Carriere, C. Cambillau
A Cutinase From Trichoderma Reesei With A Lid-Covered Activ Site And Kinetic Properties Of True Lipases.
J. Mol. Biol. V. 426 3757 2014
PubMed-ID: 25219509  |  Reference-DOI: 10.1016/J.JMB.2014.09.003

(-) Compounds

Molecule 1 - CARBOHYDRATE ESTERASE FAMILY 5
    Chains: A, B
    Engineered: YES
    Expression System: TRICHODERMA REESEI
    Expression System Taxid: 51453
    Fragment: MATURE FORM, COMPLEXED
    Gene: TRIREDRAFT_60489
    Organism Scientific: TRICHODERMA REESEI
    Organism Taxid: 431241
    Strain: QM6A

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 4)

Asymmetric Unit (2, 4)
No.NameCountTypeFull Name
1BOG2Ligand/IonB-OCTYLGLUCOSIDE
2C112Ligand/IonUNDECYL-PHOSPHINIC ACID BUTYL ESTER
Biological Unit 1 (2, 3)
No.NameCountTypeFull Name
1BOG2Ligand/IonB-OCTYLGLUCOSIDE
2C111Ligand/IonUNDECYL-PHOSPHINIC ACID BUTYL ESTER
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1BOG-1Ligand/IonB-OCTYLGLUCOSIDE
2C111Ligand/IonUNDECYL-PHOSPHINIC ACID BUTYL ESTER

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREILE A:58 , GLU A:62 , THR A:90 , PHE A:131 , SER A:164 , GLN A:165 , ILE A:225 , HIS A:229 , BOG A:302BINDING SITE FOR RESIDUE C11 A 301
2AC2SOFTWAREASP A:223 , ILE A:225 , C11 A:301 , HOH A:553 , ASP B:223 , ILE B:225 , C11 B:301BINDING SITE FOR RESIDUE BOG A 302
3AC3SOFTWARETRP A:103 , LEU A:230 , ALA A:233 , GLU A:234 , HOH A:456 , HOH A:478 , HOH A:511BINDING SITE FOR RESIDUE BOG A 303
4AC4SOFTWAREBOG A:302 , THR B:90 , PHE B:131 , SER B:164 , GLN B:165 , ILE B:218 , ILE B:225 , HIS B:229BINDING SITE FOR RESIDUE C11 B 301

(-) SS Bonds  (6, 6)

Asymmetric Unit
No.Residues
1A:55 -A:91
2A:79 -A:153
3A:212 -A:219
4B:55 -B:91
5B:79 -B:153
6B:212 -B:219

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Ser A:248 -His A:249
2His A:249 -His A:250

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4PSE)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4PSE)

(-) Exons   (0, 0)

(no "Exon" information available for 4PSE)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:220
                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh...........eeeeee............hhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhh.hhhhhh.eeeeeee............hhh.eeee..............hhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4pse A  31 WPSINEFLSELAKVMPIGDTITAACDLISDGEDAAASLFGISETENDPCGDVTVLFARGTCDPGNVGVLVGPWFFDSLQTALGSRTLGVKGVPYPASVQDFLSGSVQNGINMANQIKSVLQSCPNTKLVLGGYSQGSMVVHNAASNLDAATMSKISAVVLFGDPYYGKPVANFDAAKTLVVCHDGDNICQGGDIILLPHLTYAEDADTAAAFVVPLVSHH 250
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250


Chain B from PDB  Type:PROTEIN  Length:219
                                                                                                                                                                                                                                                           
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh...........eeeeee............hhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhhhhhhh.eeeeeee............hhh.eeee....hhhhhh....hhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4pse B  31 WPSINEFLSELAKVMPIGDTITAACDLISDGEDAAASLFGISETENDPCGDVTVLFARGTCDPGNVGVLVGPWFFDSLQTALGSRTLGVKGVPYPASVQDFLSGSVQNGINMANQIKSVLQSCPNTKLVLGGYSQGSMVVHNAASNLDAATMSKISAVVLFGDPYYGKPVANFDAAKTLVVCHDGDNICQGGDIILLPHLTYAEDADTAAAFVVPLVSH 249
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4PSE)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4PSE)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4PSE)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        G0RH85_HYPJQ | G0RH85: 4psc 4psd

(-) Related Entries Specified in the PDB File

4psc NATIVE ORTHOGONAL CRYSTAL
4psd NATIVE OHEXAGONAL CRYSTAL