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(-) Description

Title :  ESCHERICHIA COLI HFQ-RNA COMPLEX AT 0.97 A RESOLUTION
 
Authors :  E. C. Schulz, O. Barabas
Date :  24 May 14  (Deposition) - 19 Nov 14  (Release) - 26 Nov 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  0.97
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (6x)
Keywords :  Rna Chaperone Hfq Rna Lsm, Rna Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  E. C. Schulz, O. Barabas
Structure Of An Escherichia Coli Hfq:Rna Complex At 0. 97 Angstrom Resolution.
Acta Crystallogr. , Sect. F V. 70 1492 2014
PubMed-ID: 25372815  |  Reference-DOI: 10.1107/S2053230X14020044

(-) Compounds

Molecule 1 - RNA-BINDING PROTEIN HFQ
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: HFQ, BN17_41491, BU34_16545, ECS5148, LF82_0993
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (6x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1U5P1Ligand/IonURIDINE-5'-MONOPHOSPHATE
Biological Unit 1 (1, 6)
No.NameCountTypeFull Name
1U5P6Ligand/IonURIDINE-5'-MONOPHOSPHATE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLN A:8 , GLN A:41 , PHE A:42 , TYR A:55 , LYS A:56 , HIS A:57 , HOH A:208 , HOH A:218 , HOH A:219 , HOH A:221 , HOH A:226 , HOH A:244binding site for residue U5P A 101

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4PNO)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4PNO)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 4PNO)

(-) Sequences/Alignments

Asymmetric Unit
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Chain A from PDB  Type:PROTEIN  Length:64
                                                                                               
               SCOP domains ---------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..eeeee....eeeeeeeee...eeeee...eeee...eeeeee...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------- Transcript
                  4pno A  6 SLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKTVSQMVYKHAISTVVPSRPVSH 70
                                    15        25        35        45 ||     56        66    
                                                                    47|                     
                                                                     49
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4PNO)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4PNO)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4PNO)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        C1IFD2_ECOLX | C1IFD2: 4qvc 4qvd

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4PNO)