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(-) Description

Title :  A DE NOVO DESIGNED HEXAMERIC COILED COIL CC-HEX3
 
Authors :  C. W. Wood, A. J. Burton, A. R. Thomson, R. L. Brady, D. N. Woolfson
Date :  23 May 14  (Deposition) - 22 Oct 14  (Release) - 17 Dec 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.05
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A (3x),B (3x)
Biol. Unit 2:  C,D  (3x)
Biol. Unit 3:  A,B,C,D  (1x)
Keywords :  De Novo Protein, Artificially Designed - Often Synthetic, Alpha- Helical Barrel, Coiled Coil, Protein Design, Peptide . (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. R. Thomson, C. W. Wood, A. J. Burton, G. J. Bartlett, R. B. Sessions, R. L. Brady, D. N. Woolfson
Computational Design Of Water-Soluble Alpha-Helical Barrels
Science V. 346 485 2014
PubMed-ID: 25342807  |  Reference-DOI: 10.1126/SCIENCE.1257452

(-) Compounds

Molecule 1 - CC-HEX3
    Chains: A, B, C, D
    Engineered: YES
    Organism Scientific: SYNTHETIC CONSTRUCT
    Organism Taxid: 32360
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (3x): A (3x)B (3x)  
Biological Unit 2 (3x):   CD
Biological Unit 3 (1x): ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric Unit (1, 4)
No.NameCountTypeFull Name
1ACE4Mod. Amino AcidACETYL GROUP
Biological Unit 1 (1, 3)
No.NameCountTypeFull Name
1ACE3Mod. Amino AcidACETYL GROUP
Biological Unit 2 (1, 6)
No.NameCountTypeFull Name
1ACE6Mod. Amino AcidACETYL GROUP
Biological Unit 3 (1, 4)
No.NameCountTypeFull Name
1ACE4Mod. Amino AcidACETYL GROUP

(-) Sites  (0, 0)

(no "Site" information available for 4PNB)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4PNB)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 4PNB)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:31
                                                              
               SCOP domains ------------------------------- SCOP domains
               CATH domains ------------------------------- CATH domains
               Pfam domains ------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------- PROSITE
                 Transcript ------------------------------- Transcript
                  4pnb A  0 xGEIAQSIKEIAKSIKEIAWSIKEIAQSIKG 30
                            |        9        19        29 
                            |                              
                            0-ACE                          


Chain B from PDB  Type:PROTEIN  Length:31
                                                              
               SCOP domains ------------------------------- SCOP domains
               CATH domains ------------------------------- CATH domains
               Pfam domains ------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------- PROSITE
                 Transcript ------------------------------- Transcript
                  4pnb B  0 xGEIAQSIKEIAKSIKEIAWSIKEIAQSIKG 30
                            |        9        19        29 
                            0-ACE                          


Chain C from PDB  Type:PROTEIN  Length:30
                                                             
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                  4pnb C  0 xGEIAQSIKEIAKSIKEIAWSIKEIAQSIK 29
                            |        9        19        29
                            0-ACE                         


Chain D from PDB  Type:PROTEIN  Length:31
                                                              
               SCOP domains ------------------------------- SCOP domains
               CATH domains ------------------------------- CATH domains
               Pfam domains ------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------- PROSITE
                 Transcript ------------------------------- Transcript
                  4pnb D  0 xGEIAQSIKEIAKSIKEIAWSIKEIAQSIKG 30
                            |        9        19        29 
                            0-ACE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4PNB)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4PNB)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4PNB)

(-) Gene Ontology  (0, 0)

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