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(-) Description

Title :  CRYSTAL STRUCTURE OF PARTICULATE METHANE MONOOXYGENASE FROM METHYLOCYSTIS SP. ATCC 49242 (ROCKWELL)
 
Authors :  S. Sirajuddin, A. C. Rosenzweig
Date :  07 May 14  (Deposition) - 25 Jun 14  (Release) - 01 Oct 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.59
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,N
Keywords :  Bacterial Proteins, Binding Sites, Copper, Zinc, Methylocystaceae, Oxygenases, Protein Binding, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Sirajuddin, D. Barupala, S. Helling, K. Marcus, T. L. Stemmler, A. C. Rosenzweig
Effects Of Zinc On Particulate Methane Monooxygenase Activity And Structure.
J. Biol. Chem. V. 289 21782 2014
PubMed-ID: 24942740  |  Reference-DOI: 10.1074/JBC.M114.581363

(-) Compounds

Molecule 1 - UNKNOWN PEPTIDE
    Chains: D, H, N
    Organism Scientific: METHYLOCYSTIS SP. ATCC 49242
    Organism Taxid: 622637
 
Molecule 2 - PARTICULATE METHANE MONOOXYGENASE SUBUNIT C
    Chains: K, C, G
    EC Number: 1.14.18.3
    Organism Scientific: METHYLOCYSTIS SP. ATCC 49242
    Organism Taxid: 622637
    Synonym: PMOC
 
Molecule 3 - PARTICULATE METHANE MONOOXYGENASE SUBUNIT B
    Chains: A, E, I
    EC Number: 1.14.18.3
    Organism Scientific: METHYLOCYSTIS SP. ATCC 49242
    Organism Taxid: 622637
    Synonym: PMOB
 
Molecule 4 - PARTICULATE METHANE MONOOXYGENASE SUBUNIT A
    Chains: B, F, J
    EC Number: 1.14.18.3
    Organism Scientific: METHYLOCYSTIS SP. ATCC 49242
    Organism Taxid: 622637
    Synonym: PMOA

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric/Biological Unit : ABCDEFGHIJKN

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 73)

Asymmetric/Biological Unit (3, 73)
No.NameCountTypeFull Name
1CU6Ligand/IonCOPPER (II) ION
2PGT4Ligand/Ion(1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE
3UNK63Mod. Amino Acid

(-) Sites  (10, 10)

Asymmetric Unit (10, 10)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP K:129 , HIS K:133 , HIS K:146binding site for residue CU K 301
02AC2SOFTWAREGLY K:23 , MET K:24 , GLY K:27 , LEU K:80 , ALA K:81 , GLY K:82 , LEU K:84 , ARG K:102 , VAL K:106 , GLN K:109 , TRP K:110 , VAL K:159 , GLY K:163 , PHE K:166 , TYR K:167 , ARG K:171 , HOH K:404binding site for residue PGT K 302
03AC3SOFTWAREHIS A:29 , HIS A:133 , HIS A:135binding site for residue CU A 501
04AC4SOFTWAREHIS E:29 , HIS E:133 , HIS E:135binding site for residue CU E 501
05AC5SOFTWAREHIS I:29 , HIS I:133 , HIS I:135 , HOH I:607binding site for residue CU I 501
06AC6SOFTWAREASP C:129 , HIS C:133 , HIS C:146binding site for residue CU C 301
07AC7SOFTWAREGLY C:23 , MET C:24 , LEU C:30 , SER C:76 , GLY C:79 , LEU C:80 , TYR C:83 , THR C:87 , ARG C:102 , VAL C:106 , GLN C:109 , TRP C:110 , VAL C:113 , TYR C:167 , ARG C:171binding site for residue PGT C 302
08AC8SOFTWAREASP G:129 , HIS G:133 , HIS G:146binding site for residue CU G 301
09AC9SOFTWAREGLY G:23 , LEU G:30 , TYR G:83 , LEU G:84 , ARG G:102 , VAL G:106 , GLN G:109 , TYR G:167 , ARG G:171binding site for residue PGT G 302
10AD1SOFTWAREGLU G:73 , LEU G:78 , TRP G:85 , PHE G:165 , PHE G:166 , LYS G:169 , ALA G:176 , TYR G:179 , ILE G:188 , PHE G:191 , HOH G:409binding site for residue PGT G 303

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4PHZ)

(-) Cis Peptide Bonds  (42, 42)

Asymmetric/Biological Unit
No.Residues
1Asp A:164 -Pro A:165
2Lys A:219 -Ala A:220
3Asp A:226 -Asp A:227
4Thr A:273 -Glu A:274
5Glu A:274 -Gly A:275
6Gly A:275 -Thr A:276
7Val A:295 -Pro A:296
8Asn A:308 -Asn A:309
9Thr A:334 -Lys A:335
10Leu A:348 -Ser A:349
11Ala A:356 -Pro A:357
12Gly B:11 -Pro B:12
13Gly B:51 -Asp B:52
14Gly B:214 -Lys B:215
15Asp E:164 -Pro E:165
16Lys E:219 -Ala E:220
17Asp E:226 -Asp E:227
18Thr E:273 -Glu E:274
19Gly E:275 -Thr E:276
20Val E:295 -Pro E:296
21Asn E:308 -Asn E:309
22Thr E:334 -Lys E:335
23Leu E:348 -Ser E:349
24Ala E:356 -Pro E:357
25Asp I:164 -Pro I:165
26Lys I:219 -Ala I:220
27Asp I:226 -Asp I:227
28Thr I:273 -Glu I:274
29Gly I:275 -Thr I:276
30Val I:295 -Pro I:296
31Asn I:308 -Asn I:309
32Thr I:334 -Lys I:335
33Leu I:348 -Ser I:349
34Ala I:356 -Pro I:357
35Gly F:11 -Pro F:12
36Gly F:51 -Asp F:52
37Gly F:214 -Lys F:215
38Gly J:11 -Pro J:12
39Gly J:51 -Asp J:52
40Gly J:214 -Lys J:215
41Asn C:196 -Val C:197
42Val C:197 -Gly C:198

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4PHZ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4PHZ)

(-) Exons   (0, 0)

(no "Exon" information available for 4PHZ)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:388
                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhh.eeeeeeee...eee...eeeeeeeeee.............eeeeee.....eeeeeeee..ee...........eeeeeeeeee...eeeeeeeeeee...eeeeeeeeeeeee.hhhhh...ee.....ee.....hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhh.............................eeeeeeeeeeeee...eeeeeeeeeee.....eeeeee....eee...........hhh.ee...............eeeeeeeeehhhhhhh...........eeeeeeeee.....eeeeeeeee.eeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4phz A  29 HGEKSQQAFLRMRTLNWYDVQWSKTTVNVNEEMVLSGKVHVFSAWPQAVANPRVSFLNAGEPGPVLVRTAQFIGEQFAPRSVSLEIGKDYAFSINLRGRRAGRWHVHAQINVEGGGPIIGPGQWIEIKGDMKDFTDPVTLLDGSTVDLEHYGISRVYAWHLPWMAVGAAWIFFWFVRKGIITSYIRVAEGKADDVIGDDDRRIGAIVLALTILATIVGYAVTNSTFPRTIPLQAGLQKPLTPIETEGTVGVGKENVTTELNGGVYKVPGRELTINVKVKNNTSQPLRLGEYTAAGLRFLNPDVFTTKPDFPDYLLADRGLSVDATPIAPGEAKEIVVKIQDARWDIERLSDLAYDTDSQIGGLLFFFSPDGKRYASEIGGPVIPKFVA 416
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408        


Chain B from PDB  Type:PROTEIN  Length:244
                                                                                                                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh.......hhhhhh...hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh....hhhhhhhhh.eeee..eeeehhhhhhhhh.....hhhhh............hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...ee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4phz B   9 AVGPFNSVAEAAGCVQTVDWMLLVLLFFAVLGGYHVHFMLTAGDWDFWVDWKDRRMWPTVVPILGVTFCAASQAFWWVNFRLPFGAVFAALGLLIGEWINRYVNFWGWTYFPISLVFPSALIVPAIWLDVILLLSGSYVITAVVGSLGWGLLFYPNNWPAIAAFHQATEQHGQLMTLADLIGFHFVRTSMPEYIRMVERGTLRTFGKDVVPVAAFFSGFVSMMVYFLWWFMGRWYSTTKVIDTI 252
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248    


Chain C from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh.eehhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4phz C  16 ESVVDLRGMWIGLVLLNVFYLIVRIYEQVFGWRAGLDSFAPEFQTYWMSILWTEIPLELVSGLGLAGYLWKTRDRNVDAVTPREEMRRLVVLVQWLVVYGIAIYWGASFFTEQDGTWHMTVIRDTDFTPSHIIEFYMSYPIYSVIAVGAFFYAKTRIPYFAHGYSLAFLIVAIGPFMIIPNVGWMALGVFGVVLQILMRIHALVGKEGVKLLTE 256
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195  ||   232       242       252    
                                                                                                                                                                                                                198|                              
                                                                                                                                                                                                                 226                              


Chain D from PDB  Type:PROTEIN  Length:19
                                                   
               SCOP domains ------------------- SCOP domains
               CATH domains ------------------- CATH domains
               Pfam domains ------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------- SAPs(SNPs)
                    PROSITE ------------------- PROSITE
                 Transcript ------------------- Transcript
                 4phz D   3 xxxxxxxxxxxxxxxxxxx  21
                            ||||||||12|||||||||
                            3-UNK|||12-UNK|||21-UNK
                             4-UNK|||13-UNK||| 
                              5-UNK|| 14-UNK|| 
                               6-UNK|  15-UNK| 
                                7-UNK   16-UNK 
                                 8-UNK   17-UNK
                                  9-UNK   18-UNK
                                  10-UNK   19-UNK
                                   11-UNK   20-UNK


Chain E from PDB  Type:PROTEIN  Length:388
                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhh.eeeeeeee...eee...eeeeeeeeee.............eeeeee.....eeeeeeee..ee...........eeeeeeeeee...eeeeeeeeeee...eeeeeeeeeeeee.hhhhh...ee.....ee.....hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhh.............................eeeeeeeeeeeee...eeeeeeeeeee.....eeeeee....eee...........hhh.ee...............eeeeeeeeehhhhhhhhhhhhh.....eeeeeeeee.....eeeeeeeee.eeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4phz E  29 HGEKSQQAFLRMRTLNWYDVQWSKTTVNVNEEMVLSGKVHVFSAWPQAVANPRVSFLNAGEPGPVLVRTAQFIGEQFAPRSVSLEIGKDYAFSINLRGRRAGRWHVHAQINVEGGGPIIGPGQWIEIKGDMKDFTDPVTLLDGSTVDLEHYGISRVYAWHLPWMAVGAAWIFFWFVRKGIITSYIRVAEGKADDVIGDDDRRIGAIVLALTILATIVGYAVTNSTFPRTIPLQAGLQKPLTPIETEGTVGVGKENVTTELNGGVYKVPGRELTINVKVKNNTSQPLRLGEYTAAGLRFLNPDVFTTKPDFPDYLLADRGLSVDATPIAPGEAKEIVVKIQDARWDIERLSDLAYDTDSQIGGLLFFFSPDGKRYASEIGGPVIPKFVA 416
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408        


Chain F from PDB  Type:PROTEIN  Length:244
                                                                                                                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh.......hhhhhh...hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeee..eeeehhhhhhhhh.....hhhhh............hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...ee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4phz F   9 AVGPFNSVAEAAGCVQTVDWMLLVLLFFAVLGGYHVHFMLTAGDWDFWVDWKDRRMWPTVVPILGVTFCAASQAFWWVNFRLPFGAVFAALGLLIGEWINRYVNFWGWTYFPISLVFPSALIVPAIWLDVILLLSGSYVITAVVGSLGWGLLFYPNNWPAIAAFHQATEQHGQLMTLADLIGFHFVRTSMPEYIRMVERGTLRTFGKDVVPVAAFFSGFVSMMVYFLWWFMGRWYSTTKVIDTI 252
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248    


Chain G from PDB  Type:PROTEIN  Length:212
                                                                                                                                                                                                                                                    
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh.eehhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4phz G  16 ESVVDLRGMWIGLVLLNVFYLIVRIYEQVFGWRAGLDSFAPEFQTYWMSILWTEIPLELVSGLGLAGYLWKTRDRNVDAVTPREEMRRLVVLVQWLVVYGIAIYWGASFFTEQDGTWHMTVIRDTDFTPSHIIEFYMSYPIYSVIAVGAFFYAKTRIPYFAHGYSLAFLIVAIGPFMIIPNWMALGVFGVVLQILMRIHALVGKEGVKLLTE 256
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195||     234       244       254  
                                                                                                                                                                                                              196|                              
                                                                                                                                                                                                               226                              


Chain H from PDB  Type:PROTEIN  Length:20
                                                    
               SCOP domains -------------------- SCOP domains
               CATH domains -------------------- CATH domains
               Pfam domains -------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------- SAPs(SNPs)
                    PROSITE -------------------- PROSITE
                 Transcript -------------------- Transcript
                 4phz H   3 xxxxxxxxxxxxxxxxxxxx  22
                            ||||||||12||||||||22
                            3-UNK|||12-UNK|||21-UNK
                             4-UNK|||13-UNK|||22-UNK
                              5-UNK|| 14-UNK||  
                               6-UNK|  15-UNK|  
                                7-UNK   16-UNK  
                                 8-UNK   17-UNK 
                                  9-UNK   18-UNK
                                  10-UNK   19-UNK
                                   11-UNK   20-UNK


Chain I from PDB  Type:PROTEIN  Length:388
                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhh.eeeeeeee...eee...eeeeeeeeee.............eeeeee.....eeeeeeee..ee...........eeeeeeeeee...eeeeeeeeeee...eeeeeeeeeeeee.........ee.....ee.....hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhh.............................eeeeeeeeeeeee...eeeeeeeeeee.....eeeeee....eee...........hhh.ee...............eeeeeeeeehhhhhhhhhhhhhh....eeeeeeeee.....eeeeeeeee.eeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4phz I  29 HGEKSQQAFLRMRTLNWYDVQWSKTTVNVNEEMVLSGKVHVFSAWPQAVANPRVSFLNAGEPGPVLVRTAQFIGEQFAPRSVSLEIGKDYAFSINLRGRRAGRWHVHAQINVEGGGPIIGPGQWIEIKGDMKDFTDPVTLLDGSTVDLEHYGISRVYAWHLPWMAVGAAWIFFWFVRKGIITSYIRVAEGKADDVIGDDDRRIGAIVLALTILATIVGYAVTNSTFPRTIPLQAGLQKPLTPIETEGTVGVGKENVTTELNGGVYKVPGRELTINVKVKNNTSQPLRLGEYTAAGLRFLNPDVFTTKPDFPDYLLADRGLSVDATPIAPGEAKEIVVKIQDARWDIERLSDLAYDTDSQIGGLLFFFSPDGKRYASEIGGPVIPKFVA 416
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408        


Chain J from PDB  Type:PROTEIN  Length:244
                                                                                                                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh.......hhhhhh...hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeee..eeeehhhhhhhhh.....hhhhh............hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...ee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4phz J   9 AVGPFNSVAEAAGCVQTVDWMLLVLLFFAVLGGYHVHFMLTAGDWDFWVDWKDRRMWPTVVPILGVTFCAASQAFWWVNFRLPFGAVFAALGLLIGEWINRYVNFWGWTYFPISLVFPSALIVPAIWLDVILLLSGSYVITAVVGSLGWGLLFYPNNWPAIAAFHQATEQHGQLMTLADLIGFHFVRTSMPEYIRMVERGTLRTFGKDVVPVAAFFSGFVSMMVYFLWWFMGRWYSTTKVIDTI 252
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248    


Chain K from PDB  Type:PROTEIN  Length:213
                                                                                                                                                                                                                                                     
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh.eehhhhhhhhhhhhh........hhhhhhhhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4phz K  16 ESVVDLRGMWIGLVLLNVFYLIVRIYEQVFGWRAGLDSFAPEFQTYWMSILWTEIPLELVSGLGLAGYLWKTRDRNVDAVTPREEMRRLVVLVQWLVVYGIAIYWGASFFTEQDGTWHMTVIRDTDFTPSHIIEFYMSYPIYSVIAVGAFFYAKTRIPYFAHGYSLAFLIVAIGPFMIIPNVWMALGVFGVVLQILMRIHALVGKEGVKLLTE 256
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195 ||    233       243       253   
                                                                                                                                                                                                               197|                              
                                                                                                                                                                                                                226                              


Chain N from PDB  Type:PROTEIN  Length:24
                                                        
               SCOP domains ------------------------ SCOP domains
               CATH domains ------------------------ CATH domains
               Pfam domains ------------------------ Pfam domains
         Sec.struct. author .hhhhh.hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------ SAPs(SNPs)
                    PROSITE ------------------------ PROSITE
                 Transcript ------------------------ Transcript
                 4phz N   2 xxxxxxxxxxxxxxxxxxxxxxxx  25
                            ||||||||11||||||||21||||
                            2-UNK|||11-UNK|||20-UNK|
                             3-UNK|||12-UNK|||21-UNK
                              4-UNK|| 13-UNK|| 22-UNK
                               5-UNK|  14-UNK|  23-UNK
                                6-UNK   15-UNK   24-UNK
                                 7-UNK   16-UNK   25-UNK
                                  8-UNK   17-UNK    
                                   9-UNK   18-UNK   
                                   10-UNK   19-UNK
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4PHZ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4PHZ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4PHZ)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 4PHZ)

 Visualization

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  Cis Peptide Bonds
    Ala A:356 - Pro A:357   [ RasMol ]  
    Ala E:356 - Pro E:357   [ RasMol ]  
    Ala I:356 - Pro I:357   [ RasMol ]  
    Asn A:308 - Asn A:309   [ RasMol ]  
    Asn C:196 - Val C:197   [ RasMol ]  
    Asn E:308 - Asn E:309   [ RasMol ]  
    Asn I:308 - Asn I:309   [ RasMol ]  
    Asp A:164 - Pro A:165   [ RasMol ]  
    Asp A:226 - Asp A:227   [ RasMol ]  
    Asp E:164 - Pro E:165   [ RasMol ]  
    Asp E:226 - Asp E:227   [ RasMol ]  
    Asp I:164 - Pro I:165   [ RasMol ]  
    Asp I:226 - Asp I:227   [ RasMol ]  
    Glu A:274 - Gly A:275   [ RasMol ]  
    Gly A:275 - Thr A:276   [ RasMol ]  
    Gly B:11 - Pro B:12   [ RasMol ]  
    Gly B:214 - Lys B:215   [ RasMol ]  
    Gly B:51 - Asp B:52   [ RasMol ]  
    Gly E:275 - Thr E:276   [ RasMol ]  
    Gly F:11 - Pro F:12   [ RasMol ]  
    Gly F:214 - Lys F:215   [ RasMol ]  
    Gly F:51 - Asp F:52   [ RasMol ]  
    Gly I:275 - Thr I:276   [ RasMol ]  
    Gly J:11 - Pro J:12   [ RasMol ]  
    Gly J:214 - Lys J:215   [ RasMol ]  
    Gly J:51 - Asp J:52   [ RasMol ]  
    Leu A:348 - Ser A:349   [ RasMol ]  
    Leu E:348 - Ser E:349   [ RasMol ]  
    Leu I:348 - Ser I:349   [ RasMol ]  
    Lys A:219 - Ala A:220   [ RasMol ]  
    Lys E:219 - Ala E:220   [ RasMol ]  
    Lys I:219 - Ala I:220   [ RasMol ]  
    Thr A:273 - Glu A:274   [ RasMol ]  
    Thr A:334 - Lys A:335   [ RasMol ]  
    Thr E:273 - Glu E:274   [ RasMol ]  
    Thr E:334 - Lys E:335   [ RasMol ]  
    Thr I:273 - Glu I:274   [ RasMol ]  
    Thr I:334 - Lys I:335   [ RasMol ]  
    Val A:295 - Pro A:296   [ RasMol ]  
    Val C:197 - Gly C:198   [ RasMol ]  
    Val E:295 - Pro E:296   [ RasMol ]  
    Val I:295 - Pro I:296   [ RasMol ]  
 

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  1.14.18.3
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

4pi0 PARTICULATE METHANE MONOOXYGENASE FROM METHYLOCYSTIS SP. ATCC 49242 (ROCKWELL) SOAKED IN COPPER
4pi2 PARTICULATE METHANE MONOOXYGENASE FROM METHYLOCYSTIS SP. ATCC 49242 (ROCKWELL) SOAKED IN ZINC