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(-) Description

Title :  CRYSTAL STRUCTURE OF RIGOR-LIKE HUMAN NONMUSCLE MYOSIN-2B
 
Authors :  S. Munnich, S. Pathan-Chhatbar, D. J. Manstein
Date :  17 Apr 14  (Deposition) - 12 Nov 14  (Release) - 24 Dec 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.84
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Myosin, Nm-2B, Nonmuscle Myosin-2B, Rigor-Like, Nucleotide Free, Motor Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Munnich, S. Pathan-Chhatbar, D. J. Manstein
Crystal Structure Of The Rigor-Like Human Non-Muscle Myosin-2 Motor Domain.
Febs Lett. V. 588 4754 2014
PubMed-ID: 25451231  |  Reference-DOI: 10.1016/J.FEBSLET.2014.11.007

(-) Compounds

Molecule 1 - NONMUSCLE MYOSIN HEAVY CHAIN B, ALPHA-ACTININ A CHIMERA PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Common: FALL ARMYWORM
    Expression System Taxid: 7108
    Expression System Vector Type: BACULOVIRUS
    Fragment: UNP P35580 RESIDUES 1-782, UNP P05095 RESIDUES 265-502
    Organism Common: HUMAN,SLIME MOLD
    Organism Scientific: HOMO SAPIENS,DICTYOSTELIUM DISCOIDEUM
    Organism Taxid: 9606,44689

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4PD3)

(-) Sites  (0, 0)

(no "Site" information available for 4PD3)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4PD3)

(-) Cis Peptide Bonds  (5, 5)

Asymmetric Unit
No.Residues
1Asp A:9 -Pro A:10
2Asn A:527 -Pro A:528
3Ile B:76 -Gln B:77
4Asn B:979 -Gly B:980
5Val B:981 -Pro B:982

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4PD3)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4PD3)

(-) Exons   (0, 0)

(no "Exon" information available for 4PD3)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:922
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..................eeee.....eeeee...ee..eeeeee.....eeeee........hhhhh...hhhhh...hhhhhhhhhhhhhh....eeee..eeeee.........hhhhhhhh..........hhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhee.......ee..eeeeeeee.....eeeeeeeee...hhhhhh.......hhhhhhhhhhhhhhhhhhh...hhhhh.............hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh..................hhhhhhhh..hhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........eeeeeeeee........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh......hhhhhhhhhh.....hhhhhhhhhhhhh.....ee..........eeee....eeee...hhhhhh....hhhhhhhhhh..hhhhhhhh.....hhhhhhhhhhhhhhhhhh..eeeeeeee...........hhhhhhhhhhhhhhhhhhhhhh....eeeehhhhhhhhhhhh...........hhhhhhhhhhhh.....eee...eeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4pd3 A    8 EDPERYLFVDRAVIAKKLVWIPSERHGFEAASIKEERGDEVMVELAENGKKAMVNKDDIQKMNPPKFSKVEDMAELTCLNEASVLHNLKDRYYSGLIYTYSGLFCVVINPYKNLPIYSENIIEMYRGKKRHEMPPHIYAISESAYRCMLQDREDQSILCTGESGAGKTENTKKVIQYLAHVASERQLLQANPILESFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAVRQAKDERTFHIFYQLLSGAGEHLKSDLLLEGFNNYRFLSNGYIPIPGQQDKDNFQETMEAMHIMGFSHEEILSMLKVVSSVLQFGNISFKKERTDQASMPENTVAQKLCHLLGMNVMEFTRAILTPRIKVQKAQTKEQADFAVEALAKATYERLFRWLVHRINKALDRTKRQGASFIGILDIAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIDLIERPANPPGVLALLDEECWFPKATDKTFVEKLVQEQGSHSKFQKPRQLKDKADFCIIHYAGKVDYKADEWLMKNMDPLNDNVATLLHQSSDRFVAELWKDVDRTVGQLYKESLTKLMATLRNTNPNFVRCIIPNHEKRAGKLDPHLVLDQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILTPNAIPKGFMDGKQACERMIRALELDPNLYRIGQSKIFFRAGVLAHLEEERASEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSA 1003
                                    17   ||   37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197  ||   221       231       241       251       261       271       281       291       301       311       321       331       341       351       361   ||  372       382       392       402|      417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617     ||654       664       674       684       694       704       714       724       734       744       754       764       774       784       794       804       814       824       834       844       854       864       874       884       894       904       914       924   ||  951       961       971       981       991      1001  
                                        21|                                                                                                                                                                     200|                                                                                                                                                   365|                                402|                                                                                                                                                                                                                    623|                                                                                                                                                                                                                                                                                  928|                                                         
                                         32                                                                                                                                                                      215                                                                                                                                                    367                                 408                                                                                                                                                                                                                     651                                                                                                                                                                                                                                                                                   946                                                         


Chain B from PDB  Type:PROTEIN  Length:930
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..............eeeee.....eeeee...ee..ee.................hhhhh...hhhhh...hhhhhhhhhhhhhh....eeee..eeeee.........hhhhhhhh..........hhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhee.......ee..eeeeeeee.....eeeeeeeee...hhhhhh.......hhhhhhhhhhhhhhhhhhhh..hhhhh.............hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhh..hhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeeeeeee........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh......hhhhhhhhhh.....hhhhhhhhhhhhh.....ee.....eeee....eeee...hhhhhh....hhhhhhhhhh..hhhhhhhh........hhhhhhhhhhhhhhhhhh..eeeeeeee...........hhhhhhhhhhhhhhhhhhhhhhhh..eeeehhhhhhhhhhhh.........hhhhhhhhhhhhh......eee...eeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                4pd3 B    9 DPERYLFVDRAVKKLVWIPSERHGFEAASIKEERGDEVMVELAENGNKDDIQKMNPPKFSKVEDMAELTCLNEASVLHNLKDRYYSGLIYTYSGLFCVVINPYKNLPIYSENIIEMYRGKKRHEMPPHIYAISESAYRCMLQDREDQSILCTGESGAGKTENTKKVIQYLAHVASSLERQLLQANPILESFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAVRQAKDERTFHIFYQLLSGAGEHLKSDLLLEGFNNYRFLSNGYIPIPGQQDKDNFQETMEAMHIMGFSHEEILSMLKVVSSVLQFGNISFKKERNTDQASMPENTVAQKLCHLLGMNVMEFTRAILTPRIKYVQKAQTKEQADFAVEALAKATYERLFRWLVHRINKALGASFIGILDIAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIDLIERPANPPGVLALLDEECWFPKATDKTFVEKLVQEQGSHSKFQKPKADFCIIHYAGKVDYKADEWLMKNMDPLNDNVATLLHQSSDRFVAELWKDVDRMFRTVGQLYKESLTKLMATLRNTNPNFVRCIIPNHEKRAGKLDPHLVLDQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILTPNAIPKGFMDGKQACERMIRALELDPNLYRIGQSKIFFRAGVLAHLEEERASEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQK 1019
                                    18 ||     40        50        60     || 75        85        95       105       115       125       135       145       155       165       175       185       195     ||217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397    || 411       421       431       441  ||   457       467       477       487       497       507       517       527       537       547       557       572       582       592       602       612       622 ||    656       666       676       686       696       706       716       726       736       746       756       766       776       786       796       806       816       826       836       846       856       866       876       886       896       906       916       939       949       959       969       979       989       999      1009      1019
                                      20|                               66|                                                                                                                              201|                                                                                                                                                                                         402|                                  444|                                                                                                                566|                                                 624|                                                                                                                                                                                                                                                                                924|                                                                                 
                                       33                                72                                                                                                                               214                                                                                                                                                                                          407                                   451                                                                                                                 572                                                  649                                                                                                                                                                                                                                                                                 938
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4PD3)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4PD3)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4PD3)

(-) Gene Ontology  (85, 90)

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  Cis Peptide Bonds
    Asn A:527 - Pro A:528   [ RasMol ]  
    Asn B:979 - Gly B:980   [ RasMol ]  
    Asp A:9 - Pro A:10   [ RasMol ]  
    Ile B:76 - Gln B:77   [ RasMol ]  
    Val B:981 - Pro B:982   [ RasMol ]  
 
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        ACTNA_DICDI | P05095: 1g8x 5jlh

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