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(-) Description

Title :  STRUCTURE OF ANCESTRAL PYRR PROTEIN (PLUMPYRR)
 
Authors :  T. Perica, Y. Kondo, S. Tiwari, S. Mclaughlin, A. Steward, N. Reuter, J. S. A. Teichmann
Date :  08 Mar 14  (Deposition) - 17 Dec 14  (Release) - 14 Jan 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym./Biol. Unit :  A
Keywords :  Rna Binding Proteins, Reconstructed Amino Acid Sequence, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Perica, Y. Kondo, S. P. Tiwari, S. H. Mclaughlin, K. R. Kemplen, X. Zhang, A. Steward, N. Reuter, J. Clarke, S. A. Teichmann
Evolution Of Oligomeric State Through Allosteric Pathways That Mimic Ligand Binding.
Science V. 346 54346 2014
PubMed-ID: 25525255  |  Reference-DOI: 10.1126/SCIENCE.1254346

(-) Compounds

Molecule 1 - ANCESTRAL PYRR PROTEIN (PLUM)
    Chains: A
    Engineered: YES
    Expression System: BACTERIA
    Expression System Taxid: 2
    Organism Scientific: SYNTHETIC CONSTRUCT
    Organism Taxid: 32630

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 4)

Asymmetric/Biological Unit (3, 4)
No.NameCountTypeFull Name
11PE1Ligand/IonPENTAETHYLENE GLYCOL
2NA1Ligand/IonSODIUM ION
3SO42Ligand/IonSULFATE ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:105 , VAL A:107 , LEU A:108 , TYR A:109 , THR A:110 , GLY A:111 , ARG A:112 , THR A:113 , VAL A:114 , HOH A:370 , HOH A:371binding site for residue SO4 A 201
2AC2SOFTWAREASP A:10 , GLU A:11 , ARG A:15 , ARG A:126 , ARG A:174 , HOH A:303 , HOH A:322 , HOH A:341binding site for residue SO4 A 202
3AC3SOFTWAREASP A:106 , HOH A:379binding site for residue NA A 203
4AC4SOFTWAREARG A:16 , ARG A:20 , PRO A:93 , ASP A:95 , LYS A:99 , HOH A:327 , HOH A:334 , HOH A:375binding site for residue 1PE A 204

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4P3K)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4P3K)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4P3K)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4P3K)

(-) Exons   (0, 0)

(no "Exon" information available for 4P3K)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:178
                                                                                                                                                                                                                  
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeehhhhhhhhhhhhhhhhhhhh.....eeeeeehhhhhhhhhhhhhhhhhhhh....eeeeeeeee..........eeeeeeee........eeeeeeeee..hhhhhhhhhhhhhhh...eeeeeeeee...........eeeee......eeeeeehhhhhh..eeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4p3k A   3 QEKAVVLDEQAIRRALTRIAHEIIERNKGVDNCVLVGIKTRGIYLAKRLAERIEQIEGKPVPVGEIDITLYRDDLTVTSNKEPLVKGTDIPVDITDKKVILVDDVLYTGRTVRAGMDALMDLGRPSQIQLAVLVDRGHRELPIRADYVGKNVPTSKSERIVVQLSEVDGQDRVSIYEK 180
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4P3K)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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