4P1D - JenaLib

Title :   STRUCTURE OF THE COMPLEX OF A BIMOLECULAR HUMAN TELOMERIC DNA WITH COPTISINE

Authors :   M. Ferraroni, C. Bazzicalupi, P. Gratteri

Date :   26 Feb 14 (Deposition) - 18 Mar 15 (Release) - 18 Mar 15 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.55

Chains :   Asym./Biol. Unit : A,B

Keywords :   Drug-Dna Complex, G-Quadruplex, Dna (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   M. Ferraroni, C. Bazzicalupi, P. Gratteri, A. R. Bilia, C. Sissi
Crystal Structure Of The Complex Of A Bimolecular Human Telomeric Dna With Coptisine
To Be Published
PubMed: search

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 3)

Sites (3, 3)

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	DG A:4 , DG A:5 , DG A:10 , DG A:11 , K A:102 , DG B:16 , DG B:17 , DG B:22 , DG B:23	binding site for residue K A 101
2	AC2	SOFTWARE	DG A:3 , DG A:4 , DG A:9 , DG A:10 , K A:101 , DG B:15 , DG B:16 , DG B:21 , DG B:22	binding site for residue K A 102
3	AC3	SOFTWARE	DT A:1 , DA A:2 , DG A:5 , DG A:11 , DT A:12 , DT B:13 , DA B:14 , DG B:17 , DG B:23	binding site for residue KPT A 103

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
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Chain A from PDB  Type:DNA  Length:12
                                           
                  4p1d A  1 TAGGGTTAGGGT 12
                                    10

Chain B from PDB  Type:DNA  Length:12
                                           
                  4p1d B 13 TAGGGTTAGGGT 24
                                    22

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (0, 0)

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Description