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(-) Description

Title :  TOXOPLASMA GONDII ENOYL ACYL CARRIER PROTEIN REDUCTASE
 
Authors :  S. P. Muench, C. Wilkinson, S. T. Prigge, D. W. Rice
Date :  16 Dec 13  (Deposition) - 05 Feb 14  (Release) - 07 May 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B,C,E  (1x)
Biol. Unit 2:  D,F  (2x)
Keywords :  Rossmann Fold, Oxidoreductase, Enoyl Acyl Carrier Protein Reductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Wilkinson, M. J. Mcphillie, Y. Zhou, S. Woods, G. A. Afanador, S. Rawson, F. Khaliq, S. T. Prigge, C. W. Roberts, D. W. Rice, R. Mcleod, C. W. Fishwick, S. P. Muench
The Benzimidazole Based Drugs Show Good Activity Against T. Gondii But Poor Activity Against Its Proposed Enoyl Reductase Enzyme Target
Bioorg. Med. Chem. Lett. V. 24 911 2014
PubMed-ID: 24398298  |  Reference-DOI: 10.1016/J.BMCL.2013.12.066

(-) Compounds

Molecule 1 - ENOYL-ACYL CARRIER REDUCTASE
    Chains: A, B, C, D, E, F
    EC Number: 1.3.1.9
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMALC2X
    Expression System Strain: BL21 CODON PLUS (DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 103-417
    Gene: ENOYL REDUCTASE, ENR, TGVEG_000410
    Organism Scientific: TOXOPLASMA GONDII
    Organism Taxid: 5811
    Strain: RH
    Synonym: ENOYL-ACYL CARRIER REDUCTASE, PUTATIVE

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): ABC E 
Biological Unit 2 (2x):    D F

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 6)

Asymmetric Unit (1, 6)
No.NameCountTypeFull Name
1NAD6Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1NAD4Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
Biological Unit 2 (1, 4)
No.NameCountTypeFull Name
1NAD4Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:16 , ALA A:18 , GLY A:22 , TYR A:23 , TRP A:43 , LEU A:79 , ASP A:80 , ALA A:81 , SER A:127 , LEU A:128 , ALA A:129 , LEU A:177 , SER A:178 , LYS A:197 , ALA A:224 , GLY A:225 , PRO A:226 , LEU A:227 , SER A:229 , ARG A:230 , ALA A:231 , HOH A:529 , HOH A:535 , HOH A:538 , HOH A:548 , HOH A:551 , HOH A:552 , HOH A:554BINDING SITE FOR RESIDUE NAD A 401
2AC2SOFTWAREGLY B:16 , ALA B:18 , GLY B:22 , TYR B:23 , TRP B:43 , LEU B:79 , ASP B:80 , ALA B:81 , SER B:127 , LEU B:128 , ALA B:129 , LEU B:177 , SER B:178 , LYS B:197 , ALA B:224 , GLY B:225 , PRO B:226 , LEU B:227 , SER B:229 , ALA B:231 , HOH B:504 , HOH B:520 , HOH B:530 , HOH B:543 , HOH B:545 , HOH B:548 , HOH B:549BINDING SITE FOR RESIDUE NAD B 401
3AC3SOFTWAREGLY C:16 , ALA C:18 , GLY C:22 , TYR C:23 , TRP C:43 , LEU C:79 , ASP C:80 , ALA C:81 , SER C:127 , LEU C:128 , ALA C:129 , LEU C:177 , SER C:178 , LYS C:197 , ALA C:224 , GLY C:225 , PRO C:226 , LEU C:227 , SER C:229 , ALA C:231 , HOH C:517 , HOH C:543 , HOH C:544 , HOH C:546 , HOH C:548 , HOH C:552BINDING SITE FOR RESIDUE NAD C 401
4AC4SOFTWAREGLY D:16 , ALA D:18 , GLY D:22 , TYR D:23 , TRP D:43 , LEU D:79 , ASP D:80 , ALA D:81 , SER D:127 , LEU D:128 , ALA D:129 , LEU D:177 , SER D:178 , LYS D:197 , ALA D:224 , GLY D:225 , PRO D:226 , LEU D:227 , SER D:229 , ALA D:231 , HOH D:526 , HOH D:535 , HOH D:536 , HOH D:537 , HOH D:538 , HOH D:543BINDING SITE FOR RESIDUE NAD D 401
5AC5SOFTWAREGLY E:16 , ALA E:18 , GLY E:22 , TYR E:23 , TRP E:43 , LEU E:79 , ASP E:80 , ALA E:81 , SER E:127 , LEU E:128 , ALA E:129 , LEU E:177 , SER E:178 , LYS E:197 , ALA E:224 , GLY E:225 , PRO E:226 , LEU E:227 , SER E:229 , ALA E:231 , HOH E:504 , HOH E:514 , HOH E:532 , HOH E:539 , HOH E:547 , HOH E:548 , HOH E:553BINDING SITE FOR RESIDUE NAD E 401
6AC6SOFTWAREGLY F:16 , ALA F:18 , GLY F:22 , TYR F:23 , TRP F:43 , LEU F:79 , ASP F:80 , ALA F:81 , SER F:127 , LEU F:128 , ALA F:129 , LEU F:177 , SER F:178 , LYS F:197 , ALA F:224 , GLY F:225 , PRO F:226 , LEU F:227 , SER F:229 , ALA F:231 , HOH F:519 , HOH F:524 , HOH F:529 , HOH F:530 , HOH F:532 , HOH F:537BINDING SITE FOR RESIDUE NAD F 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4O1M)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4O1M)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4O1M)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4O1M)

(-) Exons   (0, 0)

(no "Exon" information available for 4O1M)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:297
                                                                                                                                                                                                                                                                                                                                         
               SCOP domains d4o1ma_ A: automated matches                                                                                                                                                                                                                                                                              SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeee......hhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhh..hhhhhh..........eeee......hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh.eeeeee..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeeeeeehhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeee....hhhhhhh.hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhh.....eeee..hhhhh........... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4o1m A   4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAISFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAMGQAVDSRSMPP 306
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233 ||    249       259       269       279       289       299       
                                                                                                                                                                                                                                                                 235|                                                                
                                                                                                                                                                                                                                                                  242                                                                


Chain B from PDB  Type:PROTEIN  Length:296
                                                                                                                                                                                                                                                                                                                                        
               SCOP domains d4o1mb_ B: automated matches                                                                                                                                                                                                                                                                             SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeee......hhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhhh.hhhhhh..........eeee......hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh.eeeeee..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeeeeeehhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeee....hhhhhh..hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhh.....eeee..hhhhh........... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4o1m B   4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAMGQAVDSRSMPP 306
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233 ||    250       260       270       280       290       300      
                                                                                                                                                                                                                                                                 235|                                                               
                                                                                                                                                                                                                                                                  243                                                               


Chain C from PDB  Type:PROTEIN  Length:297
                                                                                                                                                                                                                                                                                                                                         
               SCOP domains d4o1mc_ C: automated matches                                                                                                                                                                                                                                                                              SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee......hhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhh..................eeee......hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh.eeeeee..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeeeeeehhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeee....hhhhhh.hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhh.....eeee..hhhhh............ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4o1m C   3 FPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAMGQAVDSRSMPPL 307
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232 ||    250       260       270       280       290       300       
                                                                                                                                                                                                                                                                 234|                                                                
                                                                                                                                                                                                                                                                  243                                                                


Chain D from PDB  Type:PROTEIN  Length:296
                                                                                                                                                                                                                                                                                                                                        
               SCOP domains d4o1md_ D: automated matches                                                                                                                                                                                                                                                                             SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeee......hhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhh..hhhhhh..........eeee......hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh.eeeeee..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeeeeeehhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeee....hhhhhhh.hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhh.....eeee..hhhhh........... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4o1m D   4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAMGQAVDSRSMPP 306
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233 ||    250       260       270       280       290       300      
                                                                                                                                                                                                                                                                 235|                                                               
                                                                                                                                                                                                                                                                  243                                                               


Chain E from PDB  Type:PROTEIN  Length:298
                                                                                                                                                                                                                                                                                                                                          
               SCOP domains d4o1me_ E: automated matches                                                                                                                                                                                                                                                                               SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee......hhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhhh.hhhhhh..........eeee......hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh.eeeeee..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeeeeeehhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeee....hhhhhhh.hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhh.....eeee..hhhhh........... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4o1m E   3 FPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAISFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAMGQAVDSRSMPP 306
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232  ||   248       258       268       278       288       298        
                                                                                                                                                                                                                                                                  235|                                                                
                                                                                                                                                                                                                                                                   242                                                                


Chain F from PDB  Type:PROTEIN  Length:298
                                                                                                                                                                                                                                                                                                                                          
               SCOP domains d4o1mf_ F: automated matches                                                                                                                                                                                                                                                                               SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeee......hhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhh..hhhhhh..........eeee......hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh.eeeeee..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeeeeeehhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeee....hhhhhhh.hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhh.....eeee..hhhhh............ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4o1m F   4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAISFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAMGQAVDSRSMPPL 307
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233 ||    249       259       269       279       289       299        
                                                                                                                                                                                                                                                                 235|                                                                 
                                                                                                                                                                                                                                                                  242
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4O1M)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4O1M)

(-) Gene Ontology  (1, 1)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        Q6UCJ9_TOXGO | Q6UCJ9: 2o2s 2o50 3nj8

(-) Related Entries Specified in the PDB File

2o2s THE STRUCTURE OF T. GONDII ENOYL ACYL CARRIER PROTEIN REDUCTASE IN COMPLEX WITH NAD AND TRICLOSAN
2o2y THE CRYSTAL STRUCTURE OF P. FALCIPARUM ENOYL ACYL CARRIER PROTEIN REDUCTASE
2o50 THE CRYSTAL STRUCTURE OF TOXOPLASMA GONDII ENOYL ACYL CARRIER PROTEIN REDUCTASE
2ptg CRYSTAL STRUCTURE OF EIMERIA TENELLA ENOYL REDUCTASE
3nj8 IDENTIFICATION AND DEVELOPMENT OF NOVEL INHIBITORS OF TOXOPLASMA GONDII ENOYL REDUCTASE