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(-) Description

Title :  CRYSTAL STRUCTURE OF COPPER-BOUND NA-ASP-2
 
Authors :  A. Hofmann
Date :  03 Dec 13  (Deposition) - 14 May 14  (Release) - 14 May 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym./Biol. Unit :  A
Keywords :  Scp/Taps, Excretory/Secretory Product, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Mason, L. Tribolet, A. Simon, N. Von Gnielinski, L. Nienaber, P. Taylor, C. Willis, M. K. Jones, P. W. Sternberg, R. B. Gasser, A. Loukas, A. Hofmann
Probing The Equatorial Groove Of The Hookworm Protein And Vaccine Candidate Antigen, Na-Asp-2.
Int. J. Biochem. Cell Biol. V. 50 146 2014
PubMed-ID: 24631931  |  Reference-DOI: 10.1016/J.BIOCEL.2014.03.003

(-) Compounds

Molecule 1 - ANCYLOSTOMA SECRETED PROTEIN 2
    Chains: A
    Engineered: YES
    Expression System: PICHIA PASTORIS
    Expression System Taxid: 4922
    Gene: ASP2
    Organism Common: HUMAN HOOKWORM
    Organism Scientific: NECATOR AMERICANUS
    Organism Taxid: 51031

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1CU1Ligand/IonCOPPER (II) ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:88 , HIS A:148 , HOH A:431BINDING SITE FOR RESIDUE CU A 300

(-) SS Bonds  (5, 5)

Asymmetric/Biological Unit
No.Residues
1A:21 -A:71
2A:84 -A:167
3A:162 -A:175
4A:195 -A:201
5A:198 -A:208

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4NUN)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4NUN)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4NUN)

(-) Exons   (0, 0)

(no "Exon" information available for 4NUN)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:193
                                                                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhhhhhhhh....................eehhhhhhhhhhhhh.......hhhhhh..eeeeeee.....hhhhhhhhhhhhhhhhhhhh........hhhhhh..hhhhhhhh.....eeeeeeee....eeeeeeee................................ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4nun A  18 KAGCPDNGMSEEARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAMNNAKQCVFKHSQPNQRKGLGENIFMSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRGVGHYTQMVWQETVKLGCYVEACSNMCYVVCQYGPAGNMMGKDIYEKGEPCSKCENCDKEKGLCSA 210
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4NUN)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4NUN)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4NUN)

(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        J9ULM6_NECAM | J9ULM6: 4ly5 4nui 4nuk 4nuo

(-) Related Entries Specified in the PDB File

4nui 4nuk 4nuo