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(-) Description

Title :  CRYSTAL STRUCTURE OF SSAN FROM SALMONELLA ENTERICA
 
Authors :  S. N. Sugiman-Marangos, K. Zhang, C. A. Cooper, B. K. Coombes, M. S. Juno
Date :  21 Nov 13  (Deposition) - 23 Jul 14  (Release) - 23 Jul 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.09
Chains :  Asym./Biol. Unit :  A
Keywords :  T3Ss, Protein Transport, Atpase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  S. E. Allison, B. R. Tuinema, E. Everson, C. A. Cooper, S. N. Sugiman-Marangos, K. Zhang, M. S. Junop, B. K. Coombes
Crystal Structure Of Ssan From Salmonella Enterica
J. Biol. Chem. 2014
PubMed: search

(-) Compounds

Molecule 1 - PROBABLE SECRETION SYSTEM APPARATUS ATP SYNTHASE SSAN
    ChainsA
    EC Number3.6.3.14
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET3A
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    GeneSSAN, STM1415
    Organism ScientificSALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM
    Organism Taxid99287
    StrainSEROVAR TYPHIMURIUM SL1344

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4NPH)

(-) Sites  (0, 0)

(no "Site" information available for 4NPH)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4NPH)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1Asp A:252 -Ser A:253
2Glu A:270 -Thr A:271
3Val A:308 -Glu A:309
4Tyr A:341 -Pro A:342

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4NPH)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 4NPH)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:324
                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeehhhhh.eeee..............eee..............hhhhhhhh......eeeeee....hhhhhhhhhh......eeeeeee..hhhhhhhhhhhh.hhhhhh.eeeeee....hhhhhhhhhhhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhhhh.....hhhhhhhhhhhh.ee....eeeeeeeee...hhhhhhhhhhh.eeee.hhhhhhh......hhhhhee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4nph A  90 QVPVGEALLGRVIDGFGRPLDGRELPDVCWKAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAGVFSALPRLLERTGMGEKGSITAFYTVLVENEPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQILT 432
                                    99       109       119||     137       147       157       167       177       187       197       207       217       227       237       247       257       267    || 284       294       304    || 318       328       338       348       358       368       378       388       398       408       418       428    
                                                        120|                                                                                                                                            272|                          309|                                                                                                                      
                                                         129                                                                                                                                             280                           314                                                                                                                      

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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4NPH)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4NPH)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4NPH)

(-) Gene Ontology  (23, 23)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Asp A:252 - Ser A:253   [ RasMol ]  
    Glu A:270 - Thr A:271   [ RasMol ]  
    Tyr A:341 - Pro A:342   [ RasMol ]  
    Val A:308 - Glu A:309   [ RasMol ]  
 

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