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(-) Description

Title :  CRYSTAL STRUCTURE OF GLUTATHIONE TRANSFERASE BBTA-3750 FROM BRADYRHIZOBIUM SP., TARGET EFI-507290, WITH ONE GLUTATHIONE BOUND
 
Authors :  Y. Patskovsky, M. W. Vetting, R. Toro, R. Bhosle, N. Al Obaidi, L. L. Mor S. R. Wasserman, S. Sojitra, M. Stead, E. Washington, A. Scott Glenn, S. Chowdhury, B. Evans, J. Hammonds, B. Hillerich, J. Love, R. D. Seide H. J. Imker, J. A. Gerlt, R. N. Armstrong, S. C. Almo, Enzyme Function Initiative (Efi)
Date :  05 Nov 13  (Deposition) - 20 Nov 13  (Release) - 20 Nov 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  G,H  (1x)
Biol. Unit 5:  I,J  (1x)
Biol. Unit 6:  K,L  (1x)
Biol. Unit 7:  M,N  (1x)
Biol. Unit 8:  O,P  (1x)
Keywords :  Glutathione S-Transferase, Enzyme Function Initiative, Efi, Structural Genomics, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Patskovsky, M. W. Vetting, R. Toro, R. Bhosle, N. Al Obaidi, L. L. Morisco, S. R. Wasserman, S. Sojitra, M. Stead, E. Washington, A. Scott Glenn, S. Chowdhury, B. Evans, J. Hammonds, B. Hillerich, J. Love, R. D. Seidel, H. J. Imker, J. A. Gerlt, R. N. Armstrong, S. C. Alm
Crystal Structure Of Glutathione Transferase Bbta-3750 From Bradyrhizobium Sp. , Target Efi-507290
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PUTATIVE GLUTATHIONE S-TRANSFERASE ENZYME WITH THIOREDOXIN- LIKE DOMAIN
    Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: BBTA_3750
    Organism Scientific: BRADYRHIZOBIUM SP.
    Organism Taxid: 288000
    Strain: BTAI1 / ATCC BAA-1182

 Structural Features

(-) Chains, Units

  12345678910111213141516
Asymmetric Unit : ABCDEFGHIJKLMNOP
Biological Unit 1 (1x): AB              
Biological Unit 2 (1x):   CD            
Biological Unit 3 (1x):     EF          
Biological Unit 4 (1x):       GH        
Biological Unit 5 (1x):         IJ      
Biological Unit 6 (1x):           KL    
Biological Unit 7 (1x):             MN  
Biological Unit 8 (1x):               OP

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 16)

Asymmetric Unit (1, 16)
No.NameCountTypeFull Name
1GSH16Ligand/IonGLUTATHIONE
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1GSH2Ligand/IonGLUTATHIONE
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1GSH2Ligand/IonGLUTATHIONE
Biological Unit 3 (1, 2)
No.NameCountTypeFull Name
1GSH2Ligand/IonGLUTATHIONE
Biological Unit 4 (1, 2)
No.NameCountTypeFull Name
1GSH2Ligand/IonGLUTATHIONE
Biological Unit 5 (1, 2)
No.NameCountTypeFull Name
1GSH2Ligand/IonGLUTATHIONE
Biological Unit 6 (1, 2)
No.NameCountTypeFull Name
1GSH2Ligand/IonGLUTATHIONE
Biological Unit 7 (1, 2)
No.NameCountTypeFull Name
1GSH2Ligand/IonGLUTATHIONE
Biological Unit 8 (1, 2)
No.NameCountTypeFull Name
1GSH2Ligand/IonGLUTATHIONE

(-) Sites  (16, 16)

Asymmetric Unit (16, 16)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETHR A:28 , ASN A:30 , LYS A:33 , PHE A:52 , LYS A:58 , GLY A:69 , LYS A:70 , ILE A:71 , GLU A:89 , SER A:90 , HOH A:501 , HOH A:529BINDING SITE FOR RESIDUE GSH A 301
02AC2SOFTWARETHR B:28 , ASN B:30 , PHE B:52 , LYS B:70 , ILE B:71 , PRO B:72 , GLU B:89 , SER B:90 , HOH B:413 , HOH B:526BINDING SITE FOR RESIDUE GSH B 301
03AC3SOFTWARETHR C:28 , ASN C:30 , LYS C:33 , PHE C:52 , LYS C:58 , GLY C:69 , LYS C:70 , ILE C:71 , GLU C:89 , SER C:90 , HOH C:455BINDING SITE FOR RESIDUE GSH C 301
04AC4SOFTWARETHR D:29 , ASN D:31 , PHE D:53 , GLN D:58 , LYS D:71 , ILE D:72 , PRO D:73 , GLU D:90 , SER D:91 , HOH D:447 , HOH D:476 , HOH D:505 , HOH D:536BINDING SITE FOR RESIDUE GSH D 301
05AC5SOFTWARETHR E:29 , ASN E:31 , LYS E:34 , PHE E:53 , LYS E:59 , LYS E:71 , ILE E:72 , PRO E:73 , GLU E:90 , SER E:91 , HOH E:441BINDING SITE FOR RESIDUE GSH E 301
06AC6SOFTWARETHR F:28 , ASN F:30 , PHE F:52 , LYS F:70 , ILE F:71 , PRO F:72 , GLU F:89 , SER F:90 , HOH F:418 , HOH F:499BINDING SITE FOR RESIDUE GSH F 301
07AC7SOFTWARETHR G:28 , ASN G:30 , LYS G:33 , PHE G:52 , GLN G:57 , LYS G:58 , GLY G:69 , LYS G:70 , ILE G:71 , GLU G:89 , SER G:90 , HOH G:415BINDING SITE FOR RESIDUE GSH G 301
08AC8SOFTWARETHR H:28 , ASN H:30 , LYS H:33 , PHE H:52 , LYS H:70 , ILE H:71 , PRO H:72 , GLU H:89 , SER H:90 , HOH H:517 , HOH H:519BINDING SITE FOR RESIDUE GSH H 301
09AC9SOFTWARETHR I:28 , ASN I:30 , PHE I:52 , LYS I:70 , ILE I:71 , GLU I:89 , SER I:90 , HOH I:530 , HOH I:532 , HOH I:549 , HOH I:555BINDING SITE FOR RESIDUE GSH I 301
10BC1SOFTWARETHR J:28 , ASN J:30 , PHE J:52 , GLY J:69 , LYS J:70 , ILE J:71 , GLU J:89 , SER J:90 , HOH J:504 , HOH J:516BINDING SITE FOR RESIDUE GSH J 301
11BC2SOFTWARETHR K:28 , ASN K:30 , PHE K:52 , GLN K:57 , GLY K:69 , LYS K:70 , ILE K:71 , PRO K:72 , GLU K:89 , SER K:90 , HOH K:428 , HOH K:456 , HOH K:468BINDING SITE FOR RESIDUE GSH K 301
12BC3SOFTWARETHR L:28 , ASN L:30 , PHE L:52 , LYS L:70 , ILE L:71 , HOH L:527 , HOH L:547BINDING SITE FOR RESIDUE GSH L 301
13BC4SOFTWARETHR M:28 , ASN M:30 , PHE M:52 , GLN M:57 , LYS M:58 , LYS M:70 , ILE M:71 , PRO M:72 , GLU M:89 , SER M:90 , HOH M:439 , HOH M:482 , HOH M:519 , HOH N:523BINDING SITE FOR RESIDUE GSH M 301
14BC5SOFTWARETHR N:28 , ASN N:30 , LYS N:33 , PHE N:52 , LYS N:58 , LYS N:70 , ILE N:71 , GLU N:89 , SER N:90 , HOH N:559BINDING SITE FOR RESIDUE GSH N 301
15BC6SOFTWARETHR O:28 , ASN O:30 , PHE O:52 , LYS O:70 , ILE O:71 , GLU O:89 , SER O:90 , HOH O:525 , HOH O:529BINDING SITE FOR RESIDUE GSH O 301
16BC7SOFTWARETHR P:28 , ASN P:30 , PHE P:52 , LYS P:70 , ILE P:71 , GLU P:89 , SER P:90 , HOH P:479 , HOH P:525BINDING SITE FOR RESIDUE GSH P 301

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4NHZ)

(-) Cis Peptide Bonds  (32, 32)

Asymmetric Unit
No.Residues
1Ile A:71 -Pro A:72
2Ile A:230 -Pro A:231
3Ile B:71 -Pro B:72
4Ile B:230 -Pro B:231
5Ile C:71 -Pro C:72
6Ile C:230 -Pro C:231
7Ile D:72 -Pro D:73
8Ile D:231 -Pro D:232
9Ile E:72 -Pro E:73
10Ile E:231 -Pro E:232
11Ile F:71 -Pro F:72
12Ile F:230 -Pro F:231
13Ile G:71 -Pro G:72
14Ile G:230 -Pro G:231
15Ile H:71 -Pro H:72
16Ile H:230 -Pro H:231
17Ile I:71 -Pro I:72
18Ile I:230 -Pro I:231
19Ile J:71 -Pro J:72
20Ile J:230 -Pro J:231
21Ile K:71 -Pro K:72
22Ile K:230 -Pro K:231
23Ile L:71 -Pro L:72
24Ile L:230 -Pro L:231
25Ile M:71 -Pro M:72
26Ile M:230 -Pro M:231
27Ile N:71 -Pro N:72
28Ile N:230 -Pro N:231
29Ile O:71 -Pro O:72
30Ile O:230 -Pro O:231
31Ile P:71 -Pro P:72
32Ile P:230 -Pro P:231

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4NHZ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4NHZ)

(-) Exons   (0, 0)

(no "Exon" information available for 4NHZ)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:232
                                                                                                                                                                                                                                                                        
               SCOP domains d4nhza1 A:3-103 automated matches                                                                    d4nhza2 A:104-234 automated matches                                                                                                 SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhh.......eeeee....hhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhh........eeee........eeeehhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4nhz A   3 DLSSFPITKRWPAQHSDRIQLYSLPTPNGVKVSIMLEETGLPYEPHAIDFGKDHQKTPEFLSLNPNGKIPAIIDPNGPGDKPLGLFESGAILQYLAEKTGQFLPADPARRWQTLQWLHFQMGGIGPMFGQLGFFHKFAGREYEDKRPLQRYVAESKRLLGVLEARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQRGLEIPKRP 234
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232  


Chain B from PDB  Type:PROTEIN  Length:244
                                                                                                                                                                                                                                                                                    
               SCOP domains d4nhzb1 B:-9-103 automated matches                                                                               d4nhzb2 B:104-234 automated matches                                                                                                 SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh......hhhhhh.......eeeee..hhhhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhh........eeeeeeehhheeeeeehhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4nhz B  -9 LGTENLYFQSMSDLSSFPITKRWPAQHSDRIQLYSLPTPNGVKVSIMLEETGLPYEPHAIDFGKDHQKTPEFLSLNPNGKIPAIIDPNGPGDKPLGLFESGAILQYLAEKTGQFLPADPARRWQTLQWLHFQMGGIGPMFGQLGFFHKFAGREYEDKRPLQRYVAESKRLLGVLEARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQRGLEIPKRP 234
                                     0        10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230    


Chain C from PDB  Type:PROTEIN  Length:233
                                                                                                                                                                                                                                                                         
               SCOP domains d4nhzc1 C:2-103 automated matches                                                                     d4nhzc2 C:104-234 automated matches                                                                                                 SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh........eeeee..hhhhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhh........eeeeeeehhheeeeeehhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4nhz C   2 SDLSSFPITKRWPAQHSDRIQLYSLPTPNGVKVSIMLEETGLPYEPHAIDFGKDHQKTPEFLSLNPNGKIPAIIDPNGPGDKPLGLFESGAILQYLAEKTGQFLPADPARRWQTLQWLHFQMGGIGPMFGQLGFFHKFAGREYEDKRPLQRYVAESKRLLGVLEARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQRGLEIPKRP 234
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231   


Chain D from PDB  Type:PROTEIN  Length:232
                                                                                                                                                                                                                                                                        
               SCOP domains d4nhzd1 D:4-104 automated matches                                                                    d4nhzd2 D:105-235 automated matches                                                                                                 SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhh........eeeee....hhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhh........eeee..hhhhh.eeeehhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4nhz D   4 DLSSFPITKRWPAQHSDRIQLYSLPTPNGVKVSIMLEETGLPYEPHAIDFGKDHQKTPEFLSLNPNGKIPAIIDPNGPGDKPLGLFESGAILQYLAEKTGQFLPADPARRWQTLQWLHFQMGGIGPMFGQLGFFHKFAGREYEDKRPLQRYVAESKRLLGVLEARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQRGLEIPKRP 235
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233  


Chain E from PDB  Type:PROTEIN  Length:232
                                                                                                                                                                                                                                                                        
               SCOP domains d4nhze1 E:4-104 automated matches                                                                    d4nhze2 E:105-235 automated matches                                                                                                 SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh........eeeee..hhhhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhh........eeee........eeeehhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4nhz E   4 DLSSFPITKRWPAQHSDRIQLYSLPTPNGVKVSIMLEETGLPYEPHAIDFGKDHQKTPEFLSLNPNGKIPAIIDPNGPGDKPLGLFESGAILQYLAEKTGQFLPADPARRWQTLQWLHFQMGGIGPMFGQLGFFHKFAGREYEDKRPLQRYVAESKRLLGVLEARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQRGLEIPKRP 235
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233  


Chain F from PDB  Type:PROTEIN  Length:231
                                                                                                                                                                                                                                                                       
               SCOP domains d4nhzf1 F:4-103 automated matches                                                                   d4nhzf2 F:104-234 automated matches                                                                                                 SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh.......eeeee....hhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhh........eeee..hhhhh.eeeehhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4nhz F   4 LSSFPITKRWPAQHSDRIQLYSLPTPNGVKVSIMLEETGLPYEPHAIDFGKDHQKTPEFLSLNPNGKIPAIIDPNGPGDKPLGLFESGAILQYLAEKTGQFLPADPARRWQTLQWLHFQMGGIGPMFGQLGFFHKFAGREYEDKRPLQRYVAESKRLLGVLEARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQRGLEIPKRP 234
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233 


Chain G from PDB  Type:PROTEIN  Length:231
                                                                                                                                                                                                                                                                       
               SCOP domains d4nhzg1 G:4-103 automated matches                                                                   d4nhzg2 G:104-234 automated matches                                                                                                 SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh.......eeeee....hhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhh........eeee..hhhhh.eeeehhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4nhz G   4 LSSFPITKRWPAQHSDRIQLYSLPTPNGVKVSIMLEETGLPYEPHAIDFGKDHQKTPEFLSLNPNGKIPAIIDPNGPGDKPLGLFESGAILQYLAEKTGQFLPADPARRWQTLQWLHFQMGGIGPMFGQLGFFHKFAGREYEDKRPLQRYVAESKRLLGVLEARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQRGLEIPKRP 234
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233 


Chain H from PDB  Type:PROTEIN  Length:246
                                                                                                                                                                                                                                                                                      
               SCOP domains d4nhzh1 H:-11-103 automated matches                                                                                d4nhzh2 H:104-234 automated matches                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhhh......hhhhhh.......eeeee....hhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhh........eeee..hhhhh.eeeehhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4nhz H -11 VDLGTENLYFQSMSDLSSFPITKRWPAQHSDRIQLYSLPTPNGVKVSIMLEETGLPYEPHAIDFGKDHQKTPEFLSLNPNGKIPAIIDPNGPGDKPLGLFESGAILQYLAEKTGQFLPADPARRWQTLQWLHFQMGGIGPMFGQLGFFHKFAGREYEDKRPLQRYVAESKRLLGVLEARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQRGLEIPKRP 234
                                    -2         8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228      


Chain I from PDB  Type:PROTEIN  Length:232
                                                                                                                                                                                                                                                                        
               SCOP domains d4nhzi1 I:3-103 automated matches                                                                    d4nhzi2 I:104-234 automated matches                                                                                                 SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhh........eeeee....hhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhh........eeee..hhhhh.eeeehhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4nhz I   3 DLSSFPITKRWPAQHSDRIQLYSLPTPNGVKVSIMLEETGLPYEPHAIDFGKDHQKTPEFLSLNPNGKIPAIIDPNGPGDKPLGLFESGAILQYLAEKTGQFLPADPARRWQTLQWLHFQMGGIGPMFGQLGFFHKFAGREYEDKRPLQRYVAESKRLLGVLEARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQRGLEIPKRP 234
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232  


Chain J from PDB  Type:PROTEIN  Length:231
                                                                                                                                                                                                                                                                       
               SCOP domains d4nhzj1 J:4-103 automated matches                                                                   d4nhzj2 J:104-234 automated matches                                                                                                 SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhh........eeeee....hhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhh........eeee..hhhhh.eeeehhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4nhz J   4 LSSFPITKRWPAQHSDRIQLYSLPTPNGVKVSIMLEETGLPYEPHAIDFGKDHQKTPEFLSLNPNGKIPAIIDPNGPGDKPLGLFESGAILQYLAEKTGQFLPADPARRWQTLQWLHFQMGGIGPMFGQLGFFHKFAGREYEDKRPLQRYVAESKRLLGVLEARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQRGLEIPKRP 234
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233 


Chain K from PDB  Type:PROTEIN  Length:231
                                                                                                                                                                                                                                                                       
               SCOP domains d4nhzk1 K:4-103 automated matches                                                                   d4nhzk2 K:104-234 automated matches                                                                                                 SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh.......eeeee....hhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhh........eeee..hhhhh.eeeehhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4nhz K   4 LSSFPITKRWPAQHSDRIQLYSLPTPNGVKVSIMLEETGLPYEPHAIDFGKDHQKTPEFLSLNPNGKIPAIIDPNGPGDKPLGLFESGAILQYLAEKTGQFLPADPARRWQTLQWLHFQMGGIGPMFGQLGFFHKFAGREYEDKRPLQRYVAESKRLLGVLEARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQRGLEIPKRP 234
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233 


Chain L from PDB  Type:PROTEIN  Length:233
                                                                                                                                                                                                                                                                         
               SCOP domains d4nhzl1 L:2-103 automated matches                                                                     d4nhzl2 L:104-234 automated matches                                                                                                 SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhh........eeeee..hhhhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhh........eeee........eeeehhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4nhz L   2 SDLSSFPITKRWPAQHSDRIQLYSLPTPNGVKVSIMLEETGLPYEPHAIDFGKDHQKTPEFLSLNPNGKIPAIIDPNGPGDKPLGLFESGAILQYLAEKTGQFLPADPARRWQTLQWLHFQMGGIGPMFGQLGFFHKFAGREYEDKRPLQRYVAESKRLLGVLEARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQRGLEIPKRP 234
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231   


Chain M from PDB  Type:PROTEIN  Length:231
                                                                                                                                                                                                                                                                       
               SCOP domains d4nhzm1 M:4-103 automated matches                                                                   d4nhzm2 M:104-234 automated matches                                                                                                 SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhh........eeeee....hhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhh........eeee..hhhhh.eeeehhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4nhz M   4 LSSFPITKRWPAQHSDRIQLYSLPTPNGVKVSIMLEETGLPYEPHAIDFGKDHQKTPEFLSLNPNGKIPAIIDPNGPGDKPLGLFESGAILQYLAEKTGQFLPADPARRWQTLQWLHFQMGGIGPMFGQLGFFHKFAGREYEDKRPLQRYVAESKRLLGVLEARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQRGLEIPKRP 234
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233 


Chain N from PDB  Type:PROTEIN  Length:232
                                                                                                                                                                                                                                                                        
               SCOP domains d4nhzn1 N:3-103 automated matches                                                                    d4nhzn2 N:104-234 automated matches                                                                                                 SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhh........eeeee....hhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhh........eeeeeeehhheeeeeehhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4nhz N   3 DLSSFPITKRWPAQHSDRIQLYSLPTPNGVKVSIMLEETGLPYEPHAIDFGKDHQKTPEFLSLNPNGKIPAIIDPNGPGDKPLGLFESGAILQYLAEKTGQFLPADPARRWQTLQWLHFQMGGIGPMFGQLGFFHKFAGREYEDKRPLQRYVAESKRLLGVLEARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQRGLEIPKRP 234
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232  


Chain O from PDB  Type:PROTEIN  Length:231
                                                                                                                                                                                                                                                                       
               SCOP domains d4nhzo1 O:4-103 automated matches                                                                   d4nhzo2 O:104-234 automated matches                                                                                                 SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhh........eeeee....hhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhh........eeee..hhhhh.eeeehhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4nhz O   4 LSSFPITKRWPAQHSDRIQLYSLPTPNGVKVSIMLEETGLPYEPHAIDFGKDHQKTPEFLSLNPNGKIPAIIDPNGPGDKPLGLFESGAILQYLAEKTGQFLPADPARRWQTLQWLHFQMGGIGPMFGQLGFFHKFAGREYEDKRPLQRYVAESKRLLGVLEARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQRGLEIPKRP 234
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233 


Chain P from PDB  Type:PROTEIN  Length:232
                                                                                                                                                                                                                                                                        
               SCOP domains d4nhzp1 P:3-103 automated matches                                                                    d4nhzp2 P:104-234 automated matches                                                                                                 SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhh........eeeee....hhhhhhhhhhhhh..eeeee.....hhhhhhhhhh........eeee..hhhhh.eeeehhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4nhz P   3 DLSSFPITKRWPAQHSDRIQLYSLPTPNGVKVSIMLEETGLPYEPHAIDFGKDHQKTPEFLSLNPNGKIPAIIDPNGPGDKPLGLFESGAILQYLAEKTGQFLPADPARRWQTLQWLHFQMGGIGPMFGQLGFFHKFAGREYEDKRPLQRYVAESKRLLGVLEARLDGRQWIMDADYTIADIATLGWVRNLIGFYGARELVAFDELTHVPAWLERGLARPAVQRGLEIPKRP 234
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 32)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)
(-)
Fold: GST C-terminal domain-like (353)
(-)
Superfamily: GST C-terminal domain-like (353)
(-)
Family: automated matches (86)
(-)
Protein domain: automated matches (86)
(-)
Bradyrhizobium sp. [TaxId: 288000] (2)
1ad4nhza2A:104-234
1bd4nhzj2J:104-234
1cd4nhzk2K:104-234
1dd4nhzl2L:104-234
1ed4nhzm2M:104-234
1fd4nhzn2N:104-234
1gd4nhzo2O:104-234
1hd4nhzp2P:104-234
1id4nhzb2B:104-234
1jd4nhzc2C:104-234
1kd4nhzd2D:105-235
1ld4nhze2E:105-235
1md4nhzf2F:104-234
1nd4nhzg2G:104-234
1od4nhzh2H:104-234
1pd4nhzi2I:104-234
(-)
Class: Alpha and beta proteins (a/b) (23833)
(-)
Fold: Thioredoxin fold (994)
(-)
Superfamily: Thioredoxin-like (992)
(-)
Family: automated matches (347)
(-)
Protein domain: automated matches (347)
(-)
Bradyrhizobium sp. [TaxId: 288000] (2)
2ad4nhza1A:3-103
2bd4nhzj1J:4-103
2cd4nhzk1K:4-103
2dd4nhzl1L:2-103
2ed4nhzm1M:4-103
2fd4nhzn1N:3-103
2gd4nhzo1O:4-103
2hd4nhzp1P:3-103
2id4nhzb1B:-9-103
2jd4nhzc1C:2-103
2kd4nhzd1D:4-104
2ld4nhze1E:4-104
2md4nhzf1F:4-103
2nd4nhzg1G:4-103
2od4nhzh1H:-11-103
2pd4nhzi1I:3-103

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4NHZ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4NHZ)

(-) Gene Ontology  (1, 1)

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 Related Entries

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        A5EI34_BRASB | A5EI34: 4mf7

(-) Related Entries Specified in the PDB File

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