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(-) Description

Title :  CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM CITROBACTER KOSERI (CKO_04899), TARGET EFI-510094, APO, OPEN STRUCTURE
 
Authors :  M. W. Vetting, N. F. Al Obaidi, L. L. Morisco, S. R. Wasserman, S. Sojitr M. Stead, J. D. Attonito, A. Scott Glenn, S. Chowdhury, B. Evans, B. Hi J. Love, R. D. Seidel, H. J. Imker, J. A. Gerlt, S. C. Almo, Enzyme Funct Initiative (Efi)
Date :  01 Nov 13  (Deposition) - 20 Nov 13  (Release) - 25 Feb 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A
Keywords :  Trap Periplasmic Solute Binding Family, Enzyme Function Initiative, Efi, Structural Genomics, Transport Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. W. Vetting, N. Al-Obaidi, S. Zhao, B. San Francisco, J. Kim, D. J. Wichelecki, J. T. Bouvier, J. O. Solbiati, H. Vu, X. Zhang, D. A. Rodionov, J. D. Love, B. S. Hillerich, R. D. Seidel, R. J. Quinn, A. L. Osterman, J. E. Cronan, M. P. Jacobson, J. A. Gerlt, S. C. Almo
Experimental Strategies For Functional Annotation And Metabolism Discovery: Targeted Screening Of Solute Binding Proteins And Unbiased Panning Of Metabolomes.
Biochemistry V. 54 909 2015
PubMed-ID: 25540822  |  Reference-DOI: 10.1021/BI501388Y

(-) Compounds

Molecule 1 - TRAP PERIPLASMIC SOLUTE BINDING PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: CKO_04899
    Organism Scientific: CITROBACTER KOSERI
    Organism Taxid: 290338
    Strain: ATCC BAA-895 / CDC 4225-83 / SGSC4696

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4NG7)

(-) Sites  (0, 0)

(no "Site" information available for 4NG7)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4NG7)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Asn A:330 -Leu A:331

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4NG7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4NG7)

(-) Exons   (0, 0)

(no "Exon" information available for 4NG7)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:290
                                                                                                                                                                                                                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee......hhhhhhhhhhhhhhhh....eee......hhhhhhhhhhhh...eeee.hhhhh..hhhhhhhhh.....hhhhhhhhhhhhhhhhhhhh...eeeeeee....eeeee.....hhhhhh..eeee..hhhhhhhhhhhh.eeee.hhhhhhhhhhhh...eeeehhhhhhhh.......eeeeeeee...eeeeeehhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eee..hhhhhhhhhhhhhh...hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ng7 A  30 IKAADVHPQGYPNVVAVQKMGEKLKQQLEIKVFPGGVLGDEKQMIEQAQIGAIDMIRVSMAPVAAILPDIEVFTLPYVFRDEDHMHKIIDGDIGKSIGDKLTRLVFLGWMDSGTRNLITKNPVEKPEDLHGMKIRVQGSPVALDTLKDMGANSVAMGVSEVFSGMQTGVIDGAENNPPTFVAHNYMPVAKNYTLSGHFITPEMLLYSKVKWDKLTADEQQKILTLAREAQFEQRKLWDAYNQEALAKMKAGGVQFHEIDKAYFVKATEPVRAQYHQALMKAIADVQAENL 331
                                    39        49      ||63        73        83        93       103       113       123       133 ||    148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308   ||  321       331
                                                     56|                                                                       135|                                                                                                                                                                        312|               
                                                      61                                                                        141                                                                                                                                                                         316
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4NG7)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4NG7)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4NG7)

(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Asn A:330 - Leu A:331   [ RasMol ]  
 

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 Related Entries

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        A8AR30_CITK8 | A8AR30: 4x04

(-) Related Entries Specified in the PDB File

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