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(-) Description

Title :  CRYSTAL STRUCTURE OF ENGINEERED KUMAMOLISIN-AS FROM ALICYCLOBACILLUS SENDAIENSIS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET OR367
 
Authors :  R. Guan, I. S. Pultz, J. B. Siegel, J. Seetharaman, G. Kornhaber, M. Magl L. Mao, R. Xiao, J. K. Everett, D. Baker, G. T. Montelione, Northeast S Genomics Consortium (Nesg)
Date :  28 Oct 13  (Deposition) - 20 Nov 13  (Release) - 20 Nov 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Structural Genomics, Psi-Biology, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Engineered Protein, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. Guan, I. S. Pultz, J. Seetharaman, G. Kornhaber, L. Mao, R. Xiao, M. Maglaqui, J. K. Everett, T. B. Acton, D. Baker, G. T. Montelione
Northeast Structural Genomics Consortium Target Or367
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - KUMAMOLISIN-AS
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 190-553
    Gene: SCPA
    Organism Scientific: ALICYCLOBACILLUS SENDAIENSIS
    Organism Taxid: 192387

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 5)

Asymmetric Unit (1, 5)
No.NameCountTypeFull Name
1ZN5Ligand/IonZINC ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1ZN-1Ligand/IonZINC ION

(-) Sites  (5, 5)

Asymmetric Unit (5, 5)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:316 , ILE A:317 , GLY A:334 , GLY A:336 , ASP A:338 , HOH A:502BINDING SITE FOR RESIDUE ZN A 401
2AC2SOFTWAREHIS A:315 , GLU A:319 , HOH A:562 , HOH A:568 , HOH A:576BINDING SITE FOR RESIDUE ZN A 402
3AC3SOFTWAREASP A:210 , ASP A:258 , HOH A:543 , HOH A:564 , HOH A:598 , HOH A:629BINDING SITE FOR RESIDUE ZN A 403
4AC4SOFTWAREASP A:134 , GLU A:171 , ASP A:173 , HIS A:177 , HOH A:547 , HOH A:582BINDING SITE FOR RESIDUE ZN A 404
5AC5SOFTWAREASP A:22 , HIS A:116 , ASP A:150 , HOH A:575BINDING SITE FOR RESIDUE ZN A 405

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4NE7)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Phe A:180 -Pro A:181
2Gly A:211 -Pro A:212
3Val A:250 -Pro A:251
4Ile A:330 -Tyr A:331

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4NE7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4NE7)

(-) Exons   (0, 0)

(no "Exon" information available for 4NE7)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:356
                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains d4ne7a_ A: automated matches                                                                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhh...........eeeeee.....hhhhhhhhhhhhh.....eeeee.............hhhhhhhhhhhhhhhhh...eeeeee...hhhhhhhhhhhhhh.......eeee...ee.hhhhhhhhhhhhhhhhhhhhh..eeeee.................ee.......eeeeeeeeee....eeeeee............ee......hhhhhhhh.............ee..eeee.hhhhheeeee..eeeee.hhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhh.ee.............................eehhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ne7 A   3 PTAYTPLDVAQAYQFPEGLDGQGQCIAIIELGGGYDEASLAQYFASLGVPAPQVVSVSVDGASNQPTGDPKGPDGEVELDIEVAGALAPGAKFAVYFAPDTTAGFLDAITTAIHDPTLKPSVVSISWSGPEDSWTSAAIAAMNRAFLDAAALGVTVLAAAGDSGSTGGEQDGLYHVHFPAASPYVLACGGTRLVASGGRIAQETVWNDGPDGGATGGGVSRIFPLPAWQEHANVPPSANPGASSGRGVPDLAGNADPATGYEVVIDGEATVIGGTSAVAPLFAALVARINQKLGKAVGYLNPTLYQLPADVFHDITEGNNDIANRAQIYQAGPGWDPCTGLGSPIGVRLLQALLPS 358
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4NE7)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4NE7)

(-) Gene Ontology  (4, 4)

Asymmetric Unit(hide GO term definitions)

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 Related Entries

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UniProtKB/TrEMBL
        Q8GB88_9BACL | Q8GB88: 1sio 1siu 1sn7 1zvj 1zvk

(-) Related Entries Specified in the PDB File

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