4N6E - JenaLib

Title :   CRYSTAL STRUCTURE OF AMYCOLATOPSIS ORIENTALIS BEXX/CYSO COMPLEX

Authors :   X. Zhang, Y. Zhang, C. Kinsland, E. Sasaki, H. G. Sun, M. J. Lu, T. Liu, A. O Y. Chen, H. Liu, S. E. Ealick

Date :   11 Oct 13 (Deposition) - 14 May 14 (Release) - 09 Jul 14 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.60

Chains :   Asym. Unit : A,B
Biol. Unit 1: A,B  (2x)

Keywords :   Alpha Beta Barrel, Protein-Protein Complex, Bexx, Thiosugar Synthase, Cyso, Sulfur Carrier Protein, Lyase-Biosynthetic Protein Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   E. Sasaki, X. Zhang, H. G. Sun, M. Y. Lu, T. L. Liu, A. Ou, J. Y. Li, Y. H. Chen, S. E. Ealick, H. W. Liu
Co-Opting Sulphur-Carrier Proteins From Primary Metabolic Pathways For 2-Thiosugar Biosynthesis.
Nature V. 509 427 2014
PubMed-ID: 24814342 | Reference-DOI: 10.1038/NATURE13256

Compounds

Molecule 1 - PUTATIVE THIOSUGAR SYNTHASE
	Chains	:	A
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET28
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	BEXX
	Organism Scientific	:	AMYCOLATOPSIS ORIENTALIS
	Organism Taxid	:	797057
	Strain	:	SUBSP. VINEARIA

Molecule 2 - THIS/MOAD FAMILY PROTEIN
	Chains	:	B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PTYB1
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	AORI_6493
	Organism Scientific	:	AMYCOLATOPSIS ORIENTALIS
	Organism Taxid	:	1156913
	Strain	:	HCCB10007

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 1)

Sites (1, 1)

Asymmetric Unit (1, 1)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ALA A:169 , GLY A:195 , GLY A:196 , ASN A:217 , THR A:218 , HOH A:401 , HOH A:402 , HOH A:403 , HOH A:421	BINDING SITE FOR RESIDUE SO4 A 301

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:244
                                                                                                                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eee..eee...eee......hhhhhhhhhhhhh..eeeee..........hhhhhhhhhhhhhheeeee.....hhhhhhhhhhhhhhhhh..eeee.........hhhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhh....eeee...........hhhhhhhhhhhh...eeee....hhhhhhhhhhh...eeeehhhhhh..hhhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4n6e A  11 DEPWLKIGAREFRSRILVGIEQYDSVPLVRDVLNAAGADVFITTVDPDNRRSSLLLMDLADELPLDDFTWIGTTSFARTKESALRSARILRDSLGIEILKLDVRGDDNTPDNAGTVEAARELRAEGMELLPFILPDLATARALEEAGCAALRVMASPVASGRGIANPAAIRELIEQIGIPVVVEGGIGSARHVAEAMELGASATLVNTALVRAESPLLMAAAMRQAALAGLLSYESGPMPEVAA 254
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250

Chain B from PDB  Type:PROTEIN  Length:89
                                                                                                                         
               SCOP domains ----------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhh.......eeee...hhhhhhhhhhhhh.hhhhhhee..ee...eeeee..ee.hhhhhhhh......eeeeee.ee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------- Transcript
                 4n6e B   2 AVTVSIPTILRTHTGGEKSVEAKGATVLEIIDDVESRHAGIKARLVKEEKLHRFINVYVNDEDVRFSGGLEAEVKDGDTLTILPAVAGG  90
                                    11        21        31        41        51        61        71        81

Legend:		→ Mismatch	(orange background)
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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (3, 3)

Visualization

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	Ligands, Modified Residues, Ions
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	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
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Biological Unit
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		Biological Unit 1	[ Jena3D ]

Still Images

Jmol
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Description