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(-) Description

Title :  CRYSTAL STRUCTURE OF A C8-C4 SN3 INHIBITED ESTERASE B FROM LACTOBACILLUS RHAMNOSIS
 
Authors :  D. A. Colbert, M. D Bennett, D. J Lun, T. S Loo, B. F Anderson, G. E Nor
Date :  09 Oct 13  (Deposition) - 16 Apr 14  (Release) - 16 Apr 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym./Biol. Unit :  X
Keywords :  Alpha/Beta Hydrolase Fold, Esterase/Lipase Transferase, Triacylglycerase, Hydrolysis, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. A. Colbert, M. D Bennett, D. J Lun, T. S Loo, B. F Anderson, G. E Norris
Crystal Structure Of A C8-C4 Sn3 Inhibited Esterase B From Lactobacillus Rhamnosis
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - ESTERASE/LIPASE
    Chains: X
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PGEX_6P3_ESTB
    Expression System Strain: BL21 (DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PGEX 6P3
    Gene: LC705_02872, LRH_10360
    Mutation: YES
    Organism Scientific: LACTOBACILLUS RHAMNOSUS
    Organism Taxid: 568704
    Strain: LC 705

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : X

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric/Biological Unit (2, 3)
No.NameCountTypeFull Name
12HD1Ligand/Ion(2R)-2,3-DIBUTOXYPROPYL (R)-OCTYLPHOSPHINATE
2ACT2Ligand/IonACETATE ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETRP X:15 , GLY X:74 , GLY X:75 , GLY X:76 , SER X:146 , ALA X:147 , PHE X:245 , HIS X:278 , GLN X:283 , HOH X:706BINDING SITE FOR RESIDUE 2HD X 401
2AC2SOFTWAREGLU X:5 , ALA X:6 , HOH X:734 , HOH X:792 , HOH X:796BINDING SITE FOR RESIDUE ACT X 402
3AC3SOFTWARELYS X:266 , LEU X:267 , TRP X:268BINDING SITE FOR RESIDUE ACT X 403

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4N5I)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Leu X:107 -Pro X:108

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4N5I)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4N5I)

(-) Exons   (0, 0)

(no "Exon" information available for 4N5I)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain X from PDB  Type:PROTEIN  Length:311
                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeeee.........eeeeeee.......eeeeeee............hhhhhhhhhhh..eeeee........hhhhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhhh.........eeeee....hhhhh...hhhhhhhhhhhhhhhhh.hhhhhh..hhhhhh.......eeeeee....hhhhhhhhhhhhhhh...eeeeeehhhhh.....hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4n5i X   5 EAMLAKVQASWAQTAARDKARYADERVPEDVHWETEYRYEQSADPQQTLNLYYPAKRRNATMPTVIDIHGGGWFYGDRNLNRNYCRYLASQGYAVMGMGYRLLPDVDLRGQIQDIFASLRWLSHFGPQRGFDLDHVLLTGDSAGGHLASLVACIQQSAELQELFGVSRVNFNFTLVALVCPVAEPSKLPEAAGDMSDMAAFYLDKLSGGDQALVDHLNFSQVVKGLDLPPFMLIGGQNDSFYLQSQALLKVFDANHVTYTTKLWPASAGPHLKHVFNVQHWEWPESIETNLEMLRTFDALSKQQDQAEENE 315
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4N5I)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4N5I)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4N5I)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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    Leu X:107 - Pro X:108   [ RasMol ]  
 

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4n5h