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(-) Description

Title :  CYSTAL STRUCTURE OF CAP-SPECIFIC MRNA (NUCLEOSIDE-2'-O-)-METHYLTRANSFERASE 1
 
Authors :  M. Smietanski, M. Werener, E. Purta, K. H. Kaminska, J. Stepinski, E. Darzynkiewicz, M. Nowotny, J. M. Bujnicki
Date :  08 Oct 13  (Deposition) - 22 Jan 14  (Release) - 19 Nov 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.35
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  A  (2x)
Keywords :  Methyltransferase, Mrna Cap Methylation, Mrna, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Smietanski, M. Werner, E. Purta, K. H. Kaminska, J. Stepinski, E. Darzynkiewicz, M. Nowotny, J. M. Bujnicki
Structural Analysis Of Human 2'-O-Ribose Methyltransferases Involved In Mrna Cap Structure Formation.
Nat Commun V. 5 3004 2014
PubMed-ID: 24402442  |  Reference-DOI: 10.1038/NCOMMS4004

(-) Compounds

Molecule 1 - CAP-SPECIFIC MRNA (NUCLEOSIDE-2'-O-)-METHYLTRANSFERASE 1
    Chains: A
    EC Number: 2.1.1.57
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: FTSJD2, KIAA0082, MTR1
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: CAP1 2'O-RIBOSE METHYLTRANSFERASE 1, MTR1, HMTR1, FTSJ METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 2, INTERFERON-STIMULATED GENE 95 KDA PROTEIN, ISG95

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (1x): A
Biological Unit 2 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4N4A)

(-) Sites  (0, 0)

(no "Site" information available for 4N4A)

(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

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Chain A from PDB  Type:PROTEIN  Length:398
                                                                                                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................................eeee...hhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh....hhhhhhhhhhhhhh.......................eeeeeee...hhhhhhhhhhhh..eeeeeee...................eee......hhhhhhhhhhhhhhh.....eeeeeee.......hhhhhhhhhhhhhhhhhhhhhhheeeeeeeeeee....hhhhhhhhhhhhhheeeeeee...........eeeeeeee...hhhhhhhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4n4a A 140 NVDWRDEPEPSACEQVSWFPECTTEIPDTQEMSDWMVVGKRKMIIEDETEFCGEELLHSVLQCKSVFDVLDGEEMRRARTRANPYEMIRGVFFLNRAAMKMANMDFVFDRMFTNPRDSYGKPLVKDREAELLYFADVCAGPGGFSEYVLWRKKWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSIVRTGGHFICKTFDLFTPFSVGLVYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVGIDDVRDYLFAVNIKLNQLRNTDSDVNLVVPLEVIKGDHEFTDYMIRSNESHCSLQIKALAKIHAFVQDTTLSEPRQAEIRKECLRLWGIPDQA 545
                                   149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319     ||337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537        
                                                                                                                                                                                                                   325|                                                                                                                                                                                                                   
                                                                                                                                                                                                                    334
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4N4A)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4N4A)

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(-) Gene Ontology  (12, 12)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CMTR1_HUMAN | Q8N1G2: 4n48 4n49

(-) Related Entries Specified in the PDB File

4n48 SAME PROTEIN IN COMPLEX WITH MRNA FRAGMENT
4n49 SAME PROTEIN IN COMPLEX WITH CAPPED GUANOSINE