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(-) Description

Title :  CDPK1 FROM NEOSPORA CANINUM IN COMPLEX WITH INHIBITOR UW1294
 
Authors :  E. A. Merritt
Date :  26 Sep 13  (Deposition) - 09 Oct 13  (Release) - 07 May 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.10
Chains :  Asym./Biol. Unit :  A
Keywords :  Serine/Threonine Protein Kinase, Transferase, Calcium-Binding, Atp- Binding, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. K. Ojo, M. C. Reid, L. Kallur Siddaramaiah, J. Muller, P. Winzer, Z. Zhang, K. R. Keyloun, R. S. Vidadala, E. A. Merritt, W. G. Hol, D. J. Maly, E. Fan, W. C. Van Voorhis, A. Hemphill
Neospora Caninum Calcium-Dependent Protein Kinase 1 Is An Effective Drug Target For Neosporosis Therapy.
Plos One V. 9 92929 2014
PubMed-ID: 24681759  |  Reference-DOI: 10.1371/JOURNAL.PONE.0092929
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CALMODULIN-LIKE DOMAIN PROTEIN KINASE ISOENZYME GAMMA, RELATED
    Chains: A
    EC Number: 2.7.11.17
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: AVA0421
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 22-506
    Gene: CDPK1, NCLIV_011980, XP_003880764
    Organism Scientific: NEOSPORA CANINUM
    Organism Taxid: 572307
    Strain: LIVERPOOL

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
12E81Ligand/Ion3-(6-ETHOXYNAPHTHALEN-2-YL)-1-[(1-METHYLPIPERIDIN-4-YL)METHYL]-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-AMINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:59 , VAL A:64 , ALA A:77 , LYS A:79 , MET A:111 , LEU A:125 , GLU A:128 , VAL A:129 , TYR A:130 , GLU A:134 , ASP A:194 , LEU A:197 , HOH A:722BINDING SITE FOR RESIDUE 2E8 A 601

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4MX9)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4MX9)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4MX9)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4MX9)

(-) Exons   (0, 0)

(no "Exon" information available for 4MX9)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:459
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhheeeeeeeeee..eeeeeeee.....eeeeeeee........hhhhhhhhhhhhh.........eeeeee...eeeeee......hhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh.......hhh.eee........eee...hhhhh.....hhhhhh......hhhhhhh....hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh.....hhhhh..hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eehhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.......eehhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeehhhhhhhhhhh..hhhhhhhhhhhhh.....eeehhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4mx9 A  42 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYYYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMKSMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSSELATIFGVSDVDSETWKNVLAEVDKNNDGEVDFDEFQQMLLKLCGN 506
                                    51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381      |397       407       417       427       437       447       457       467       477       487       497         
                                                                                                                                                                                                                                                                                                                                                                                    388|                                                                                                               
                                                                                                                                                                                                                                                                                                                                                                                     395
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4MX9)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4MX9)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4MX9)

(-) Gene Ontology  (8, 8)

Asymmetric/Biological Unit(hide GO term definitions)

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  2.7.11.17
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        F0V9W9_NEOCL | F0V9W9: 4m97 4mxa

(-) Related Entries Specified in the PDB File

4m97 NCCDPK1 APO