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(-) Description

Title :  3.65 ANGSTROM CRYSTAL STRUCTURE OF SERINE-RICH REPEAT PROTEIN (SRR2) FROM STREPTOCOCCUS AGALACTIAE
 
Authors :  G. Minasov, L. Shuvalova, I. Dubrovska, J. Winsor, H. S. Seo, R. Seepers K. S. Doran, T. M. Iverson, P. M. Sullam, W. F. Anderson, Center For St Genomics Of Infectious Diseases (Csgid)
Date :  19 Aug 13  (Deposition) - 06 Nov 13  (Release) - 01 Jan 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.65
Chains :  Asym./Biol. Unit :  A
Keywords :  Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, Serine-Rich Repeat Protein, Srr2, Fibrinogen Binding Glycoprotein, Protein Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. S. Seo, G. Minasov, R. Seepersaud, K. S. Doran, I. Dubrovska, L. Shuvalova, W. F. Anderson, T. M. Iverson, P. M. Sullam
Characterization Of Fibrinogen Binding By Glycoproteins Srr And Srr2 Of Streptococcus Agalactiae.
J. Biol. Chem. V. 288 35982 2013
PubMed-ID: 24165132  |  Reference-DOI: 10.1074/JBC.M113.513358

(-) Compounds

Molecule 1 - SERINE-RICH REPEAT PROTEIN 2
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET 28A
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 213-548
    Organism Scientific: STREPTOCOCCUS AGALACTIAE
    Organism Taxid: 1311

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4MBR)

(-) Sites  (0, 0)

(no "Site" information available for 4MBR)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4MBR)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Ser A:532 -Ser A:533
2Gly A:536 -Tyr A:537

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4MBR)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:316
                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeeeee..........eee........eeeeeee.......eeeeee...ee......eeeeeeee.....eeeeeeee....eeeeeehhhhhhh..eeeeeee..ee........eeeee..ee........eeeee....eee.....eeeeeeeeeee....eeeeeeee......eeeeeeeeeeeee.......hhhhheeeeeeee...............eehhhhhh........eeeeeeeee...eeeeeeeee.....eeeeeeee......eeeeeeee.............. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4mbr A 230 VQGQDVTDKLQNLDIKLSGGVQAKAGVINMDKSESMHMSLKFTIDSVNRGDTFEIKLSDNIDTNGASNYSIVEPIKSPTGEVYATGIYDSQKKSIVYSFTDFAASKNNINGILDIPLWPDDTTVQNTKEDVLFSVKIKDQEATIKETVKYDPPVRIDFAGGVSVDSRITNIDDVGKKMTYISQINVDGKSLYNYNGLYTRIYNYSKESTADLKNSTIKIYKTTSDNIVESMVQDYSSMEDVTSKFANSYPEKGWYDIYWGQFIASNETYVIVVETPFTNAVTLNTTLSDYNENNGVEHNHTYSSESGYSDVNAQER 545
                                   239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4MBR)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (3, 3)

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  Cis Peptide Bonds
    Gly A:536 - Tyr A:537   [ RasMol ]  
    Ser A:532 - Ser A:533   [ RasMol ]  
 

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(-) Related Entries Specified in the PDB File

4mbo RELATED ID: IDP92610 RELATED DB: TARGETTRACK