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(-) Description

Title :  TPR3 OF FIMV FROM P. AERUGINOSA (PAO1)
 
Authors :  Y. Nguyen, K. Zhang, M. Daniel-Ivad, H. Robinson, F. Wolfram, S. N. Sugi Marangos, M. S. Junop, L. L. Burrows, P. L. Howell
Date :  19 Aug 13  (Deposition) - 20 Aug 14  (Release) - 24 Feb 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.01
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B,E  (1x)
Biol. Unit 2:  C,D,F  (1x)
Keywords :  Tpr, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Daniel-Ivad, Y. Nguyen, K. Zhang, R. Buensuceso, H. Robinson, F. Wolfram, S. N. Sugiman-Marangos, M. S. Junop, P. L. Howell, L. L. Burrows
Crystal Structure Of Tpr2 From Fimv
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - MOTILITY PROTEIN FIMV
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET151-D-TOPO
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: TPR2, UNP RESIDUES 862-919
    Gene: FIMV, PA3115
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 208964
    Strain: PAO1

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): AB  E 
Biological Unit 2 (1x):   CD F

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4MBQ)

(-) Sites  (0, 0)

(no "Site" information available for 4MBQ)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4MBQ)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4MBQ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4MBQ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4MBQ)

(-) Exons   (0, 0)

(no "Exon" information available for 4MBQ)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:49
                                                                                 
               SCOP domains ------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------- Transcript
                 4mbq A 871 DEAATKLDLARAYIDMGDSEGARDILDEVLAEGNDSQQAEARELLERLA 919
                                   880       890       900       910         


Chain B from PDB  Type:PROTEIN  Length:50
                                                                                  
               SCOP domains -------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------- Transcript
                 4mbq B 869 GADEAATKLDLARAYIDMGDSEGARDILDEVLAEGNDSQQAEARELLERL 918
                                   878       888       898       908       918


Chain C from PDB  Type:PROTEIN  Length:51
                                                                                   
               SCOP domains --------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------- Transcript
                 4mbq C 868 SGADEAATKLDLARAYIDMGDSEGARDILDEVLAEGNDSQQAEARELLERL 918
                                   877       887       897       907       917 


Chain D from PDB  Type:PROTEIN  Length:51
                                                                                   
               SCOP domains --------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------- Transcript
                 4mbq D 869 GADEAATKLDLARAYIDMGDSEGARDILDEVLAEGNDSQQAEARELLERLA 919
                                   878       888       898       908       918 


Chain E from PDB  Type:PROTEIN  Length:50
                                                                                  
               SCOP domains -------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------- Transcript
                 4mbq E 869 GADEAATKLDLARAYIDMGDSEGARDILDEVLAEGNDSQQAEARELLERL 918
                                   878       888       898       908       918


Chain F from PDB  Type:PROTEIN  Length:50
                                                                                  
               SCOP domains -------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------- Transcript
                 4mbq F 869 GADEAATKLDLARAYIDMGDSEGARDILDEVLAEGNDSQQAEARELLERL 918
                                   878       888       898       908       918
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4MBQ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4MBQ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4MBQ)

(-) Gene Ontology  (2, 2)

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 Related Entries

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        Q9HZA6_PSEAE | Q9HZA6: 4mal

(-) Related Entries Specified in the PDB File

4mal THIS IS THE NATIVE FORM OF THE SAME PROTEIN DETERMINED AS A SELENOMETHIONINE DERIVATIVE IN 4MAL.