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(-) Description

Title :  CRYSTAL STRUCTURE OF VIBRIO CHOLERA MAJOR PSEUDOPILIN EPSG
 
Authors :  F. S. Vago, K. Raghunathan, J. C. Jens, W. J. Wedemeyer, M. Bagdasarian, J. S. Brunzelle, D. N. Arvidson
Date :  26 Jul 13  (Deposition) - 16 Jul 14  (Release) - 16 Jul 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  A,B,C,D,E,F,I,J,K,L,Q,R
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Biol. Unit 5:  E  (1x)
Biol. Unit 6:  F  (1x)
Biol. Unit 7:  I  (1x)
Biol. Unit 8:  J  (1x)
Biol. Unit 9:  K  (1x)
Biol. Unit 10:  L  (1x)
Biol. Unit 11:  Q  (1x)
Biol. Unit 12:  R  (1x)
Keywords :  Type Ii Secretion System, Pseudopilus, Transport Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. S. Vago, K. Raghunathan, J. C. Jens, W. J. Wedemeyer, M. Bagdasarian J. S. Brunzelle, D. N. Arvidson
Crystal Structure Of Vibrio Cholera Major Pseudopilin Epsg
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - TYPE II SECRETION SYSTEM PROTEIN G
    Chains: A, B, C, D, E, F, I, J, K, L, Q, R
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET24A
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 35-146
    Gene: EPSG, VC_2730
    Organism Scientific: VIBRIO CHOLERAE
    Organism Taxid: 243277
    Strain: ATCC 39315 / EL TOR INABA N16961, O1 BIOVAR
    Synonym: T2SS PROTEIN G, CHOLERA TOXIN SECRETION PROTEIN EPSG, GENERAL SECRETION PATHWAY PROTEIN G

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDEFIJKLQR
Biological Unit 1 (1x): A           
Biological Unit 2 (1x):  B          
Biological Unit 3 (1x):   C         
Biological Unit 4 (1x):    D        
Biological Unit 5 (1x):     E       
Biological Unit 6 (1x):      F      
Biological Unit 7 (1x):       I     
Biological Unit 8 (1x):        J    
Biological Unit 9 (1x):         K   
Biological Unit 10 (1x):          L  
Biological Unit 11 (1x):           Q 
Biological Unit 12 (1x):            R

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 87)

Asymmetric Unit (6, 87)
No.NameCountTypeFull Name
1CA14Ligand/IonCALCIUM ION
2CL9Ligand/IonCHLORIDE ION
3NA6Ligand/IonSODIUM ION
4PT12Ligand/IonPLATINUM (II) ION
5SO414Ligand/IonSULFATE ION
6ZN32Ligand/IonZINC ION
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2CL-1Ligand/IonCHLORIDE ION
3NA-1Ligand/IonSODIUM ION
4PT-1Ligand/IonPLATINUM (II) ION
5SO41Ligand/IonSULFATE ION
6ZN-1Ligand/IonZINC ION
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2CL-1Ligand/IonCHLORIDE ION
3NA-1Ligand/IonSODIUM ION
4PT-1Ligand/IonPLATINUM (II) ION
5SO41Ligand/IonSULFATE ION
6ZN-1Ligand/IonZINC ION
Biological Unit 3 (1, 1)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2CL-1Ligand/IonCHLORIDE ION
3NA-1Ligand/IonSODIUM ION
4PT-1Ligand/IonPLATINUM (II) ION
5SO41Ligand/IonSULFATE ION
6ZN-1Ligand/IonZINC ION
Biological Unit 4 (1, 2)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2CL-1Ligand/IonCHLORIDE ION
3NA-1Ligand/IonSODIUM ION
4PT-1Ligand/IonPLATINUM (II) ION
5SO42Ligand/IonSULFATE ION
6ZN-1Ligand/IonZINC ION
Biological Unit 5 (1, 1)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2CL-1Ligand/IonCHLORIDE ION
3NA-1Ligand/IonSODIUM ION
4PT-1Ligand/IonPLATINUM (II) ION
5SO41Ligand/IonSULFATE ION
6ZN-1Ligand/IonZINC ION
Biological Unit 6 (1, 1)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2CL-1Ligand/IonCHLORIDE ION
3NA-1Ligand/IonSODIUM ION
4PT-1Ligand/IonPLATINUM (II) ION
5SO41Ligand/IonSULFATE ION
6ZN-1Ligand/IonZINC ION
Biological Unit 7 (1, 2)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2CL-1Ligand/IonCHLORIDE ION
3NA-1Ligand/IonSODIUM ION
4PT-1Ligand/IonPLATINUM (II) ION
5SO42Ligand/IonSULFATE ION
6ZN-1Ligand/IonZINC ION
Biological Unit 8 (1, 1)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2CL-1Ligand/IonCHLORIDE ION
3NA-1Ligand/IonSODIUM ION
4PT-1Ligand/IonPLATINUM (II) ION
5SO41Ligand/IonSULFATE ION
6ZN-1Ligand/IonZINC ION
Biological Unit 9 (1, 2)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2CL-1Ligand/IonCHLORIDE ION
3NA-1Ligand/IonSODIUM ION
4PT-1Ligand/IonPLATINUM (II) ION
5SO42Ligand/IonSULFATE ION
6ZN-1Ligand/IonZINC ION
Biological Unit 10 (0, 0)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2CL-1Ligand/IonCHLORIDE ION
3NA-1Ligand/IonSODIUM ION
4PT-1Ligand/IonPLATINUM (II) ION
5SO4-1Ligand/IonSULFATE ION
6ZN-1Ligand/IonZINC ION
Biological Unit 11 (1, 1)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2CL-1Ligand/IonCHLORIDE ION
3NA-1Ligand/IonSODIUM ION
4PT-1Ligand/IonPLATINUM (II) ION
5SO41Ligand/IonSULFATE ION
6ZN-1Ligand/IonZINC ION
Biological Unit 12 (1, 1)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2CL-1Ligand/IonCHLORIDE ION
3NA-1Ligand/IonSODIUM ION
4PT-1Ligand/IonPLATINUM (II) ION
5SO41Ligand/IonSULFATE ION
6ZN-1Ligand/IonZINC ION

(-) Sites  (86, 86)

Asymmetric Unit (86, 86)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:44 , ASP A:48 , HIS B:140 , HIS B:141BINDING SITE FOR RESIDUE ZN A 201
02AC2SOFTWAREGLU A:139 , HIS A:142 , HIS A:144BINDING SITE FOR RESIDUE ZN A 202
03AC3SOFTWAREHIS A:140 , HIS A:141 , GLU B:44 , ASP B:48BINDING SITE FOR RESIDUE ZN A 203
04AC4SOFTWARELYS A:105 , GLY A:106 , ILE A:108 , ASP A:109 , ASN A:130 , TRP A:131 , HOH A:344BINDING SITE FOR RESIDUE NA A 204
05AC5SOFTWARELEU A:113 , ASP A:116 , GLN A:118 , GLY A:120 , GLY A:125 , ASP A:127BINDING SITE FOR RESIDUE CA A 205
06AC6SOFTWAREHIS A:143BINDING SITE FOR RESIDUE CL A 206
07AC7SOFTWAREGLU A:65BINDING SITE FOR RESIDUE NA A 207
08AC8SOFTWAREMET A:49BINDING SITE FOR RESIDUE PT A 208
09AC9SOFTWAREGLU A:139 , HIS A:140 , HOH A:326BINDING SITE FOR RESIDUE SO4 A 209
10BC1SOFTWARETHR B:59 , THR B:60 , ASP B:61 , HOH B:305 , LYS I:86BINDING SITE FOR RESIDUE NA B 201
11BC2SOFTWARELEU B:113 , ASP B:116 , GLN B:118 , GLY B:120 , GLY B:125 , ASP B:127BINDING SITE FOR RESIDUE CA B 202
12BC3SOFTWAREGLU B:139 , HIS B:142 , HIS B:144BINDING SITE FOR RESIDUE ZN B 203
13BC4SOFTWARELYS B:105 , GLY B:106 , ILE B:108 , ASP B:109 , ASN B:130 , TRP B:131BINDING SITE FOR RESIDUE NA B 204
14BC5SOFTWAREMET B:49 , ARG B:80 , CL B:207BINDING SITE FOR RESIDUE PT B 206
15BC6SOFTWAREMET B:49 , PT B:206BINDING SITE FOR RESIDUE CL B 207
16BC7SOFTWARELYS A:51 , GLU B:139 , HIS B:140 , HOH B:330BINDING SITE FOR RESIDUE SO4 B 208
17BC8SOFTWAREHIS C:140 , HIS C:141 , GLU D:44 , ASP D:48BINDING SITE FOR RESIDUE ZN C 201
18BC9SOFTWAREGLU C:44 , ASP C:48 , HIS D:140 , HIS D:141BINDING SITE FOR RESIDUE ZN C 202
19CC1SOFTWAREHIS C:143 , HIS R:143BINDING SITE FOR RESIDUE ZN C 203
20CC2SOFTWARELEU C:113 , ASP C:116 , GLN C:118 , GLY C:120 , GLY C:125 , ASP C:127BINDING SITE FOR RESIDUE CA C 204
21CC3SOFTWAREMET C:49BINDING SITE FOR RESIDUE PT C 205
22CC4SOFTWAREGLU C:139 , HIS C:140BINDING SITE FOR RESIDUE SO4 C 206
23CC5SOFTWAREGLU D:139 , HIS D:142 , HIS D:144 , ASP R:135BINDING SITE FOR RESIDUE ZN D 201
24CC6SOFTWAREGLU A:75 , ASP D:61BINDING SITE FOR RESIDUE ZN D 202
25CC7SOFTWAREHIS D:143BINDING SITE FOR RESIDUE ZN D 203
26CC8SOFTWARELYS D:105 , GLY D:106 , ILE D:108 , ASP D:109 , ASN D:130 , TRP D:131BINDING SITE FOR RESIDUE NA D 204
27CC9SOFTWARELEU D:113 , ASP D:116 , GLN D:118 , GLY D:120 , GLY D:125 , ASP D:127BINDING SITE FOR RESIDUE CA D 205
28DC1SOFTWAREMET D:49 , ARG D:80 , CL D:207BINDING SITE FOR RESIDUE PT D 206
29DC2SOFTWARETHR C:38 , MET D:49 , PT D:206BINDING SITE FOR RESIDUE CL D 207
30DC3SOFTWARELYS D:35 , PRO D:89 , LYS D:90BINDING SITE FOR RESIDUE SO4 D 208
31DC4SOFTWARELEU D:138 , GLU D:139 , HIS D:140 , HOH D:368BINDING SITE FOR RESIDUE SO4 D 209
32DC5SOFTWAREGLU E:44 , ASP E:48 , HIS F:140 , HIS F:141BINDING SITE FOR RESIDUE ZN E 201
33DC6SOFTWAREHIS E:140 , HIS E:141 , GLU F:44 , ASP F:48BINDING SITE FOR RESIDUE ZN E 202
34DC7SOFTWAREHIS E:143BINDING SITE FOR RESIDUE ZN E 203
35DC8SOFTWAREGLU E:139 , HIS E:142 , HIS E:144BINDING SITE FOR RESIDUE ZN E 204
36DC9SOFTWARELEU E:113 , ASP E:116 , GLN E:118 , GLY E:120 , GLY E:125 , ASP E:127BINDING SITE FOR RESIDUE CA E 205
37EC1SOFTWAREMET E:49 , ARG E:80 , CL E:207 , CL E:208BINDING SITE FOR RESIDUE PT E 206
38EC2SOFTWAREMET E:49 , ARG E:80 , PT E:206BINDING SITE FOR RESIDUE CL E 207
39EC3SOFTWAREMET E:49 , ARG E:80 , PT E:206 , GLN F:34BINDING SITE FOR RESIDUE CL E 208
40EC4SOFTWARELEU E:138 , GLU E:139 , HIS E:140 , HOH E:336 , LYS F:51BINDING SITE FOR RESIDUE SO4 E 209
41EC5SOFTWAREHIS F:143BINDING SITE FOR RESIDUE ZN F 201
42EC6SOFTWARELEU F:113 , ASP F:116 , GLN F:118 , GLY F:120 , GLY F:125 , ASP F:127BINDING SITE FOR RESIDUE CA F 202
43EC7SOFTWAREGLY A:26 , ASP F:61BINDING SITE FOR RESIDUE CA F 203
44EC8SOFTWAREMET F:49 , ARG F:80BINDING SITE FOR RESIDUE PT F 204
45EC9SOFTWAREGLU F:139 , HIS F:142 , HIS F:144 , ASP I:135BINDING SITE FOR RESIDUE ZN F 205
46FC1SOFTWARELEU F:138 , GLU F:139 , HIS F:140BINDING SITE FOR RESIDUE SO4 F 206
47FC2SOFTWAREHIS I:140 , HIS I:141 , GLU J:44 , ASP J:48BINDING SITE FOR RESIDUE ZN I 201
48FC3SOFTWAREASP F:135 , GLU I:139 , HIS I:142 , HIS I:144BINDING SITE FOR RESIDUE ZN I 202
49FC4SOFTWAREGLU I:44 , ASP I:48 , HIS J:140 , HIS J:141BINDING SITE FOR RESIDUE ZN I 203
50FC5SOFTWARELEU I:113 , ASP I:116 , GLN I:118 , GLY I:120 , GLY I:125 , ASP I:127BINDING SITE FOR RESIDUE CA I 204
51FC6SOFTWAREMET I:49 , ARG I:80BINDING SITE FOR RESIDUE PT I 205
52FC7SOFTWAREARG C:87 , LYS I:35 , ARG I:87 , PRO I:89 , LYS I:90 , HOH I:344BINDING SITE FOR RESIDUE SO4 I 206
53FC8SOFTWARELEU I:138 , GLU I:139 , HIS I:140BINDING SITE FOR RESIDUE SO4 I 207
54FC9SOFTWAREGLU J:139 , HIS J:142 , HIS J:144BINDING SITE FOR RESIDUE ZN J 201
55GC1SOFTWAREASP E:61 , ASP J:61BINDING SITE FOR RESIDUE ZN J 202
56GC2SOFTWARELEU J:113 , ASP J:116 , GLN J:118 , GLY J:120 , GLY J:125 , ASP J:127BINDING SITE FOR RESIDUE CA J 203
57GC3SOFTWAREMET J:49 , ARG J:80BINDING SITE FOR RESIDUE PT J 204
58GC4SOFTWAREGLU J:139 , HIS J:140BINDING SITE FOR RESIDUE SO4 J 205
59GC5SOFTWAREGLU K:44 , ASP K:48 , HIS L:140 , HIS L:141BINDING SITE FOR RESIDUE ZN K 201
60GC6SOFTWAREGLU K:139 , HIS K:142BINDING SITE FOR RESIDUE ZN K 202
61GC7SOFTWAREHIS K:140 , HIS K:141 , GLU L:44 , ASP L:48BINDING SITE FOR RESIDUE ZN K 203
62GC8SOFTWAREHIS K:143BINDING SITE FOR RESIDUE ZN K 204
63GC9SOFTWAREGLY K:63 , LEU K:64 , HOH K:332 , HOH K:338 , HOH K:339BINDING SITE FOR RESIDUE CL K 205
64HC1SOFTWARELEU K:113 , ASP K:116 , GLN K:118 , GLY K:120 , GLY K:125 , ASP K:127BINDING SITE FOR RESIDUE CA K 206
65HC2SOFTWAREMET K:49BINDING SITE FOR RESIDUE PT K 207
66HC3SOFTWARELYS K:35 , PRO K:89 , LYS K:90 , HOH K:326BINDING SITE FOR RESIDUE SO4 K 208
67HC4SOFTWARELEU K:138 , GLU K:139 , HIS K:140 , HOH K:305 , LYS L:51BINDING SITE FOR RESIDUE SO4 K 209
68HC5SOFTWAREASP L:135BINDING SITE FOR RESIDUE ZN L 201
69HC6SOFTWAREGLU L:139 , HIS L:142 , HIS L:144BINDING SITE FOR RESIDUE ZN L 202
70HC7SOFTWARELEU L:113 , ASP L:116 , GLN L:118 , GLY L:120 , GLY L:125 , ASP L:127BINDING SITE FOR RESIDUE CA L 203
71HC8SOFTWAREHIS L:143BINDING SITE FOR RESIDUE ZN L 204
72HC9SOFTWAREMET L:49 , ARG L:80BINDING SITE FOR RESIDUE PT L 205
73IC1SOFTWAREMET K:49 , THR L:38 , HOH L:360BINDING SITE FOR RESIDUE CL L 206
74IC2SOFTWAREGLU Q:139 , HIS Q:142 , HIS Q:144BINDING SITE FOR RESIDUE ZN Q 201
75IC3SOFTWAREGLU Q:44 , ASP Q:48 , HIS R:140 , HIS R:141BINDING SITE FOR RESIDUE ZN Q 202
76IC4SOFTWAREHIS Q:140 , HIS Q:141 , GLU R:44 , ASP R:48BINDING SITE FOR RESIDUE ZN Q 203
77IC5SOFTWARELEU Q:113 , ASP Q:116 , GLN Q:118 , GLY Q:120 , GLY Q:125 , ASP Q:127BINDING SITE FOR RESIDUE CA Q 204
78IC6SOFTWAREASP Q:61BINDING SITE FOR RESIDUE CA Q 205
79IC7SOFTWAREMET Q:49 , ARG Q:80BINDING SITE FOR RESIDUE PT Q 206
80IC8SOFTWAREGLU Q:139 , HIS Q:140 , LYS R:51BINDING SITE FOR RESIDUE SO4 Q 207
81IC9SOFTWAREASP D:135 , GLU R:139 , HIS R:142 , HIS R:144BINDING SITE FOR RESIDUE ZN R 201
82JC1SOFTWARELEU R:113 , ASP R:116 , GLN R:118 , GLY R:120 , GLY R:125 , ASP R:127BINDING SITE FOR RESIDUE CA R 202
83JC2SOFTWAREHIS R:143BINDING SITE FOR RESIDUE CL R 203
84JC3SOFTWAREMET R:49 , CL R:205BINDING SITE FOR RESIDUE PT R 204
85JC4SOFTWAREMET R:49 , PT R:204BINDING SITE FOR RESIDUE CL R 205
86JC5SOFTWARELYS Q:51 , LEU R:138 , GLU R:139 , HIS R:140BINDING SITE FOR RESIDUE SO4 R 206

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4LW9)

(-) Cis Peptide Bonds  (25, 25)

Asymmetric Unit
No.Residues
1Asn A:73 -Pro A:74
2Ser A:101 -Pro A:102
3Asn B:73 -Pro B:74
4Ser B:101 -Pro B:102
5Asn C:73 -Pro C:74
6Ser C:101 -Pro C:102
7Asn D:73 -Pro D:74
8Ser D:101 -Pro D:102
9His D:143 -His D:144
10Asn E:73 -Pro E:74
11Ser E:101 -Pro E:102
12Asn F:73 -Pro F:74
13Ser F:101 -Pro F:102
14Asn I:73 -Pro I:74
15Ser I:101 -Pro I:102
16Asn J:73 -Pro J:74
17Ser J:101 -Pro J:102
18Asn K:73 -Pro K:74
19Ser K:101 -Pro K:102
20Asn L:73 -Pro L:74
21Ser L:101 -Pro L:102
22Asn Q:73 -Pro Q:74
23Ser Q:101 -Pro Q:102
24Asn R:73 -Pro R:74
25Ser R:101 -Pro R:102

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4LW9)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4LW9)

(-) Exons   (0, 0)

(no "Exon" information available for 4LW9)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:119
                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh.............................eee........eeee.........hhhhh.ee.hhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                 4lw9 A  26 GNKEKADQQKAVTDIVALENALDMYKLDNSVYPTTDQGLEALVTKPTNPEPRNYREGGYIKRLPKDPWGNDYQYLSPGDKGTIDVFTLGADGQEGGEGTGADIGNWNIQDFQLEHHHHH 144
                                    35        45        55        65        75        85        95       105       115       125       135         


Chain B from PDB  Type:PROTEIN  Length:118
                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh.............................eee........eeee.........hhhhh.ee.hhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------- Transcript
                 4lw9 B  27 NKEKADQQKAVTDIVALENALDMYKLDNSVYPTTDQGLEALVTKPTNPEPRNYREGGYIKRLPKDPWGNDYQYLSPGDKGTIDVFTLGADGQEGGEGTGADIGNWNIQDFQLEHHHHH 144
                                    36        46        56        66        76        86        96       106       116       126       136        


Chain C from PDB  Type:PROTEIN  Length:118
                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh.............................eee........eeeehhhhh....hhhhh.ee.hhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------- Transcript
                 4lw9 C  27 NKEKADQQKAVTDIVALENALDMYKLDNSVYPTTDQGLEALVTKPTNPEPRNYREGGYIKRLPKDPWGNDYQYLSPGDKGTIDVFTLGADGQEGGEGTGADIGNWNIQDFQLEHHHHH 144
                                    36        46        56        66        76        86        96       106       116       126       136        


Chain D from PDB  Type:PROTEIN  Length:119
                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh.............................eee........eeee.........hhhhh.ee.hhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                 4lw9 D  26 GNKEKADQQKAVTDIVALENALDMYKLDNSVYPTTDQGLEALVTKPTNPEPRNYREGGYIKRLPKDPWGNDYQYLSPGDKGTIDVFTLGADGQEGGEGTGADIGNWNIQDFQLEHHHHH 144
                                    35        45        55        65        75        85        95       105       115       125       135         


Chain E from PDB  Type:PROTEIN  Length:118
                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh.............................eee........eeee.........hhhhh.ee..hhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------- Transcript
                 4lw9 E  27 NKEKADQQKAVTDIVALENALDMYKLDNSVYPTTDQGLEALVTKPTNPEPRNYREGGYIKRLPKDPWGNDYQYLSPGDKGTIDVFTLGADGQEGGEGTGADIGNWNIQDFQLEHHHHH 144
                                    36        46        56        66        76        86        96       106       116       126       136        


Chain F from PDB  Type:PROTEIN  Length:114
                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh.............................eee........eeee.........hhhhh.ee.hhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
                 4lw9 F  31 ADQQKAVTDIVALENALDMYKLDNSVYPTTDQGLEALVTKPTNPEPRNYREGGYIKRLPKDPWGNDYQYLSPGDKGTIDVFTLGADGQEGGEGTGADIGNWNIQDFQLEHHHHH 144
                                    40        50        60        70        80        90       100       110       120       130       140    


Chain I from PDB  Type:PROTEIN  Length:117
                                                                                                                                                     
               SCOP domains --------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh.............................eee........eeee.........hhhhh.ee..hhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------- Transcript
                 4lw9 I  28 KEKADQQKAVTDIVALENALDMYKLDNSVYPTTDQGLEALVTKPTNPEPRNYREGGYIKRLPKDPWGNDYQYLSPGDKGTIDVFTLGADGQEGGEGTGADIGNWNIQDFQLEHHHHH 144
                                    37        47        57        67        77        87        97       107       117       127       137       


Chain J from PDB  Type:PROTEIN  Length:119
                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh.............................eee........eeee.........hhhhh.ee..hhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                 4lw9 J  26 GNKEKADQQKAVTDIVALENALDMYKLDNSVYPTTDQGLEALVTKPTNPEPRNYREGGYIKRLPKDPWGNDYQYLSPGDKGTIDVFTLGADGQEGGEGTGADIGNWNIQDFQLEHHHHH 144
                                    35        45        55        65        75        85        95       105       115       125       135         


Chain K from PDB  Type:PROTEIN  Length:117
                                                                                                                                                     
               SCOP domains --------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh.............................eee........eeee.........hhhhh.ee..hhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------- Transcript
                 4lw9 K  27 NKEKADQQKAVTDIVALENALDMYKLDNSVYPTTDQGLEALVTKPTNPEPRNYREGGYIKRLPKDPWGNDYQYLSPGDKGTIDVFTLGADGQEGGEGTGADIGNWNIQDFQLEHHHH 143
                                    36        46        56        66        76        86        96       106       116       126       136       


Chain L from PDB  Type:PROTEIN  Length:118
                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh.............................eee........eeee.........hhhhh.ee..hhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------- Transcript
                 4lw9 L  27 NKEKADQQKAVTDIVALENALDMYKLDNSVYPTTDQGLEALVTKPTNPEPRNYREGGYIKRLPKDPWGNDYQYLSPGDKGTIDVFTLGADGQEGGEGTGADIGNWNIQDFQLEHHHHH 144
                                    36        46        56        66        76        86        96       106       116       126       136        


Chain Q from PDB  Type:PROTEIN  Length:119
                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh.............................eee........eeeehhhhh....hhhhh.ee..hhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                 4lw9 Q  26 GNKEKADQQKAVTDIVALENALDMYKLDNSVYPTTDQGLEALVTKPTNPEPRNYREGGYIKRLPKDPWGNDYQYLSPGDKGTIDVFTLGADGQEGGEGTGADIGNWNIQDFQLEHHHHH 144
                                    35        45        55        65        75        85        95       105       115       125       135         


Chain R from PDB  Type:PROTEIN  Length:118
                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh.............................eee........eeeehhhhh....hhhhh.ee..hhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------- Transcript
                 4lw9 R  27 NKEKADQQKAVTDIVALENALDMYKLDNSVYPTTDQGLEALVTKPTNPEPRNYREGGYIKRLPKDPWGNDYQYLSPGDKGTIDVFTLGADGQEGGEGTGADIGNWNIQDFQLEHHHHH 144
                                    36        46        56        66        76        86        96       106       116       126       136
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4LW9)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4LW9)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4LW9)

(-) Gene Ontology  (6, 6)

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  4lw9
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 Related Entries

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        GSPG_VIBCH | P45773: 3fu1

(-) Related Entries Specified in the PDB File

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