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(-) Description

Title :  CRYSTAL STRUCTURE OF S-ADENOSYL-L-HOMOCYSTEINE HYDROLASE FROM BRADYRHIZOBIUM ELKANII IN COMPLEX WITH ADENOSINE
 
Authors :  T. Manszewski, K. Singh, B. Imiolczyk, M. Jaskolski
Date :  26 Jul 13  (Deposition) - 30 Jul 14  (Release) - 16 Dec 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.74
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Cellular Methylation, Sah Hydrolysis, Nad+ Cofactor, Atmospheric Nitrogen Fixation, Rhizobium-Legume Symbiosis, Hydrolase, Nad+ Cofactor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Manszewski, K. Singh, B. Imiolczyk, M. Jaskolski
An Enzyme Captured In Two Conformational States: Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase From Bradyrhizobium Elkanii.
Acta Crystallogr. , Sect. D V. 71 2422 2015
PubMed-ID: 26627650  |  Reference-DOI: 10.1107/S1399004715018659
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - S-ADENOSYL-L-HOMOCYSTEINE HYDROLASE (SAHASE)
    Chains: A, B, C, D
    EC Number: 3.3.1.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET151/D-TOPO
    Expression System Strain: BL21STAR
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Gene: BESAHASE
    Organism Scientific: BRADYRHIZOBIUM ELKANII
    Organism Taxid: 29448

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 28)

Asymmetric/Biological Unit (5, 28)
No.NameCountTypeFull Name
1ACT3Ligand/IonACETATE ION
2ADN3Ligand/IonADENOSINE
3GOL15Ligand/IonGLYCEROL
4NAD4Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
5NH43Ligand/IonAMMONIUM ION

(-) Sites  (28, 28)

Asymmetric Unit (28, 28)
No.NameEvidenceResiduesDescription
01AC1SOFTWARELEU A:57 , HIS A:58 , THR A:60 , GLN A:62 , THR A:63 , ASP A:135 , GLU A:197 , THR A:198 , LYS A:227 , ASP A:231 , HIS A:342 , LEU A:383 , MET A:390 , GLY A:391 , HIS A:392 , MET A:397 , PHE A:401 , NAD A:503BINDING SITE FOR RESIDUE ADN A 501
02AC2SOFTWAREGLN A:62 , MET A:390 , HIS A:392 , HOH A:717 , HOH A:763 , HOH C:620BINDING SITE FOR RESIDUE NH4 A 502
03AC3SOFTWARETHR A:198 , THR A:199 , THR A:200 , ASN A:232 , GLY A:263 , ASP A:264 , VAL A:265 , GLU A:284 , VAL A:285 , ASP A:286 , CYS A:289 , THR A:317 , GLY A:318 , ASN A:319 , ILE A:322 , ILE A:340 , GLY A:341 , HIS A:342 , LEU A:383 , ASN A:385 , HIS A:392 , ADN A:501 , HOH A:604 , HOH A:626 , HOH A:641 , HOH A:719 , HOH A:787 , HOH A:813 , GLN B:454 , LYS B:467 , TYR B:471BINDING SITE FOR RESIDUE NAD A 503
04AC4SOFTWARETHR A:200 , HIS A:203 , GLY A:318 , HOH A:786 , HOH A:1009 , TYR B:457BINDING SITE FOR RESIDUE GOL A 504
05AC5SOFTWARELEU A:427 , LYS A:429 , ASP A:432 , ASP A:469 , ARG B:472BINDING SITE FOR RESIDUE GOL A 505
06AC6SOFTWARELYS A:106 , ARG A:246 , GLY A:387 , ASN A:388 , ALA A:389 , HOH A:1026BINDING SITE FOR RESIDUE GOL A 506
07AC7SOFTWAREHIS B:58 , THR B:60 , GLN B:62 , THR B:63 , ASP B:135 , GLU B:197 , THR B:198 , LYS B:227 , ASP B:231 , HIS B:342 , MET B:390 , GLY B:391 , HIS B:392 , MET B:397 , PHE B:401 , NAD B:503BINDING SITE FOR RESIDUE ADN B 501
08AC8SOFTWAREGLN B:62 , MET B:390 , HIS B:392 , HOH B:635 , HOH B:756 , HOH D:630BINDING SITE FOR RESIDUE NH4 B 502
09AC9SOFTWAREGLN A:454 , LYS A:467 , TYR A:471 , THR B:198 , THR B:199 , THR B:200 , ASN B:232 , GLY B:261 , GLY B:263 , ASP B:264 , VAL B:265 , SER B:283 , GLU B:284 , VAL B:285 , ASP B:286 , CYS B:289 , THR B:317 , GLY B:318 , ASN B:319 , ILE B:322 , ILE B:340 , GLY B:341 , HIS B:342 , ASN B:385 , HIS B:392 , ADN B:501 , HOH B:628 , HOH B:631 , HOH B:644 , HOH B:713 , HOH B:735 , HOH B:741BINDING SITE FOR RESIDUE NAD B 503
10BC1SOFTWAREARG A:472 , VAL B:426 , LEU B:427 , LYS B:429 , ASP B:432 , ASP B:469BINDING SITE FOR RESIDUE GOL B 504
11BC2SOFTWARELYS A:452 , ASP A:453 , PRO B:33 , GLU B:40 , HOH B:679 , HOH B:697 , HOH B:761BINDING SITE FOR RESIDUE GOL B 505
12BC3SOFTWARELYS B:106 , ARG B:246 , GLY B:387 , ASN B:388 , ALA B:389 , HOH B:645 , HOH B:690 , HOH B:819BINDING SITE FOR RESIDUE GOL B 506
13BC4SOFTWAREGLY B:254 , ARG B:279 , ALA C:294 , TYR C:298 , GLU C:299 , VAL C:300 , ILE D:443 , GLY D:444BINDING SITE FOR RESIDUE GOL B 507
14BC5SOFTWARELYS B:106 , GLN B:363BINDING SITE FOR RESIDUE ACT B 508
15BC6SOFTWAREGLY B:459BINDING SITE FOR RESIDUE ACT B 509
16BC7SOFTWAREHIS C:58 , THR C:60 , GLN C:62 , THR C:63 , ASP C:135 , GLU C:197 , THR C:198 , LYS C:227 , ASP C:231 , HIS C:342 , MET C:390 , HIS C:392 , MET C:397 , PHE C:401 , NAD C:503BINDING SITE FOR RESIDUE ADN C 501
17BC8SOFTWAREHOH A:663 , GLN C:62 , MET C:390 , HIS C:392 , HOH C:676 , HOH C:722BINDING SITE FOR RESIDUE NH4 C 502
18BC9SOFTWARETHR C:198 , THR C:199 , THR C:200 , ASN C:232 , GLY C:261 , GLY C:263 , ASP C:264 , VAL C:265 , SER C:283 , GLU C:284 , VAL C:285 , ASP C:286 , CYS C:289 , THR C:317 , GLY C:318 , ASN C:319 , ILE C:322 , ILE C:340 , GLY C:341 , HIS C:342 , LEU C:383 , ASN C:385 , HIS C:392 , ADN C:501 , HOH C:606 , HOH C:613 , HOH C:622 , HOH C:743 , HOH C:750 , HOH C:766 , LYS D:467 , TYR D:471BINDING SITE FOR RESIDUE NAD C 503
19CC1SOFTWARELEU C:427 , LYS C:429 , ASP C:432 , ASP C:469 , ARG D:472BINDING SITE FOR RESIDUE GOL C 504
20CC2SOFTWAREHOH A:1026 , LYS C:106 , ARG C:246 , GLY C:387 , ASN C:388 , ALA C:389 , HOH C:739 , HOH C:845BINDING SITE FOR RESIDUE GOL C 505
21CC3SOFTWAREARG B:274 , GLY B:297 , ARG C:274 , GLY C:277 , CYS C:278 , ARG C:279 , HOH C:619 , HOH C:725 , HOH C:765 , HOH C:820BINDING SITE FOR RESIDUE GOL C 506
22CC4SOFTWAREGLY C:459 , PRO C:465 , LYS C:467 , HOH C:679 , HOH C:883BINDING SITE FOR RESIDUE GOL C 507
23CC5SOFTWAREASP C:344 , ARG C:353 , HOH C:690BINDING SITE FOR RESIDUE ACT C 508
24CC6SOFTWARELYS C:467 , TYR C:471 , ASP D:231 , ASN D:232 , GLY D:263 , ASP D:264 , VAL D:265 , SER D:283 , GLU D:284 , VAL D:285 , ASP D:286 , CYS D:289 , THR D:317 , GLY D:318 , ASN D:319 , ILE D:322 , ILE D:340 , GLY D:341 , HIS D:342 , ASN D:385 , HIS D:392 , HOH D:713 , HOH D:717 , HOH D:718 , HOH D:720 , HOH D:728 , HOH D:780 , HOH D:813 , HOH D:825BINDING SITE FOR RESIDUE NAD D 501
25CC7SOFTWAREHOH C:926 , LEU D:427 , LYS D:429 , ASP D:432 , ASP D:469 , HOH D:743 , HOH D:811BINDING SITE FOR RESIDUE GOL D 502
26CC8SOFTWAREASN D:83 , ILE D:84 , TYR D:113 , ASP D:138 , GLU D:164BINDING SITE FOR RESIDUE GOL D 503
27CC9SOFTWARELEU D:233 , ARG D:237 , ALA D:271 , HOH D:732 , HOH D:735 , HOH D:818 , HOH D:847BINDING SITE FOR RESIDUE GOL D 504
28DC1SOFTWAREGLU C:449 , LEU C:450 , GLN C:462 , HOH C:658 , LYS D:452 , ASP D:456 , HOH D:973BINDING SITE FOR RESIDUE GOL D 505

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4LVC)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1Gly A:464 -Pro A:465
2Gly B:464 -Pro B:465
3Gly C:464 -Pro C:465
4Gly D:464 -Pro D:465

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4LVC)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4LVC)

(-) Exons   (0, 0)

(no "Exon" information available for 4LVC)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:468
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeee...hhhhhhhhhhhhhh..eeeee.......hhhhhhhhhhh...ee.....hhhhhhhhhhhh..........eeee..hhhhhhhhhhhhhhh..hhhhhh..hhhhhhhhhhhhhhhhhh..hhhhhhhhhh..eee.hhhhhhhhhhhhhh......eee...hhhhhh...hhhhhhhhhhhhhhhhh......eeeee..hhhhhhhhhhhhhh..eeeee..hhhhhhhhhhh..ee.hhhhhh....eeee........hhhhhhhh...eeeee...hhhhh.hhhhh..eeeeee..eeeee.....eeeee.hhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.........ee..hhhhhhhhhhhh...........hhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4lvc A   6 GFTDYIVKDIALADFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLAALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTAKLFDWHGGGTPNMILDDGGDATMLVHAGYRAEQGDTAFLDKPGSEEEEIFYALVKRLLKEKPKGWFAEIAKNIKGVSEETTTGVHRLYEMANKGTLLFPAINVNDSVTKSKFDNLYGCRESLVDGIRRGTDVMLSGKVAMVAGFGDVGKGSAASLRQAGCRVMVSEVDPICALQAAMEGYEVVTMEDAAPRADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQIASLRNLKWTNIKPQVDEIEFPDKHRIIMLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELFANNKDSKYAKKVYVLPKTLDEKVARLHLAKIGVKLTELRKDQADYIGVKQEGPYKSDHYRY 473
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465        


Chain B from PDB  Type:PROTEIN  Length:468
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeee...hhhhhhhhhhhhhh..eeeee.......hhhhhhhhhhh...ee.....hhhhhhhhhhhh..........eeee..hhhhhhhhhhhhhhh..hhhhhh..hhhhhhhhhhhhhhhhhh..hhhhhhhhhh..eee.hhhhhhhhhhhhhh......eee...hhhhhhhhhhhhhhhhhhhhhhhhhh......eeeee..hhhhhhhhhhhhhh..eeeee..hhhhhhhhhhh..ee.hhhhhh....eeee........hhhhhhhh...eeeee.........hhhhh..eeeeee..eeeee.....eeeee.hhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.........ee..hhhhhhhhhhhhhhhhh......hhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4lvc B   6 GFTDYIVKDIALADFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLAALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTAKLFDWHGGGTPNMILDDGGDATMLVHAGYRAEQGDTAFLDKPGSEEEEIFYALVKRLLKEKPKGWFAEIAKNIKGVSEETTTGVHRLYEMANKGTLLFPAINVNDSVTKSKFDNLYGCRESLVDGIRRGTDVMLSGKVAMVAGFGDVGKGSAASLRQAGCRVMVSEVDPICALQAAMEGYEVVTMEDAAPRADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQIASLRNLKWTNIKPQVDEIEFPDKHRIIMLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELFANNKDSKYAKKVYVLPKTLDEKVARLHLAKIGVKLTELRKDQADYIGVKQEGPYKSDHYRY 473
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465        


Chain C from PDB  Type:PROTEIN  Length:468
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeee...hhhhhhhhhhhhhh..eeeee.......hhhhhhhhhhh...ee.....hhhhhhhhhhhh..........eeee..hhhhhhhhhhhhhhh..hhhhhh..hhhhhhhhhhhhhhhhhh..hhhhhhhhhh..eee.hhhhhhhhhhhhhh......eee...hhhhhhhhhhhhhhhhhhhhhhhhhh......eeeee..hhhhhhhhhhhhhh..eeeee..hhhhhhhhhhh..ee.hhhhhh....eeee........hhhhhhhh...eeeee...hhhhh.hhhhh..eeeeee..eeeee.....eeeee.hhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.........ee..hhhhhhhhhhhhh..........hhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4lvc C   6 GFTDYIVKDIALADFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLAALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTAKLFDWHGGGTPNMILDDGGDATMLVHAGYRAEQGDTAFLDKPGSEEEEIFYALVKRLLKEKPKGWFAEIAKNIKGVSEETTTGVHRLYEMANKGTLLFPAINVNDSVTKSKFDNLYGCRESLVDGIRRGTDVMLSGKVAMVAGFGDVGKGSAASLRQAGCRVMVSEVDPICALQAAMEGYEVVTMEDAAPRADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQIASLRNLKWTNIKPQVDEIEFPDKHRIIMLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELFANNKDSKYAKKVYVLPKTLDEKVARLHLAKIGVKLTELRKDQADYIGVKQEGPYKSDHYRY 473
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465        


Chain D from PDB  Type:PROTEIN  Length:468
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeee...hhhhhhhhhhhhhh..eeeee.......hhhhhhhhhhh...ee.....hhhhhhhhhhhh..........eeee..hhhhhhhhhhhhhhh..hhhhhh..hhhhhhhhhhhhhhhhhh..hhhhhhhhhh..eee.hhhhhhhhhhhhhh......eee...hhhhhhhhhhhhhhhhhhhhhhhhhh......eeeee..hhhhhhhhhhhhhh..eeeee..hhhhhhhhhhh..ee.hhhhhh....eeee........hhhhhhhh...eeeee.........hhhhh..eeeeee..eeeee.....eeeee.hhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.........eee.hhhhhhhhhhhhhhhhh......hhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4lvc D   6 GFTDYIVKDIALADFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLAALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTAKLFDWHGGGTPNMILDDGGDATMLVHAGYRAEQGDTAFLDKPGSEEEEIFYALVKRLLKEKPKGWFAEIAKNIKGVSEETTTGVHRLYEMANKGTLLFPAINVNDSVTKSKFDNLYGCRESLVDGIRRGTDVMLSGKVAMVAGFGDVGKGSAASLRQAGCRVMVSEVDPICALQAAMEGYEVVTMEDAAPRADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQIASLRNLKWTNIKPQVDEIEFPDKHRIIMLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELFANNKDSKYAKKVYVLPKTLDEKVARLHLAKIGVKLTELRKDQADYIGVKQEGPYKSDHYRY 473
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4LVC)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4LVC)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4LVC)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 4LVC)

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  Cis Peptide Bonds
    Gly A:464 - Pro A:465   [ RasMol ]  
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    Gly C:464 - Pro C:465   [ RasMol ]  
    Gly D:464 - Pro D:465   [ RasMol ]  
 

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    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  SAHH_BRAEL | A0A087WNH6
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 4LVC)

(-) Related Entries Specified in the PDB File

1b3r RAT LIVER S-ADENOSYLHOMOCYSTEIN HYDROLASE
1li4 HUMAN S-ADENOSYLHOMOCYSTEINE HYDROLASE COMPLEXED WITH NEPLANOCIN
3n58 CRYSTAL STRUCTURE OF S-ADENOSYL-L-HOMOCYSTEINE HYDROLASE FROM BRUCELLA MELITENSIS IN TERNARY COMPLEX WITH NAD AND ADENOSINE, ORTHORHOMBIC FORM
3ond CRYSTAL STRUCTURE OF LUPINUS LUTEUS S-ADENOSYL-L- HOMOCYSTEINE HYDROLASE IN COMPLEX WITH ADENOSINE
3one CRYSTAL STRUCTURE OF LUPINUS LUTEUS S-ADENOSYL-L- HOMOCYSTEINE HYDROLASE IN COMPLEX WITH ADENINE
3onf CRYSTAL STRUCTURE OF LUPINUS LUTEUS S-ADENOSYL-L- HOMOCYSTEINE HYDROLASE IN COMPLEX WITH CORDYCEPIN