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(-) Description

Title :  CRYSTAL STRUCTURE OF GLYOXALASE III (ORF 19.251) FROM CANDIDA ALBICANS
 
Authors :  S. Hasim, N. A. Hussin, K. W. Nickerson, M. A. Wilson
Date :  20 Jul 13  (Deposition) - 07 Aug 13  (Release) - 05 Feb 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym./Biol. Unit :  A
Keywords :  Dj-1 Superfamily, Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Hasim, N. A. Hussin, F. Alomar, K. R. Bidasee, K. W. Nickerson, M. A. Wilson
A Glutathione-Independent Glyoxalase Of The Dj-1 Superfamil Plays An Important Role In Managing Metabolically Generated Methylglyoxal In Candida Albicans.
J. Biol. Chem. V. 289 1662 2014
PubMed-ID: 24302734  |  Reference-DOI: 10.1074/JBC.M113.505784

(-) Compounds

Molecule 1 - GLYOXALASE III (GLUTATHIONE-INDEPENDENT)
    Chains: A
    EC Number: 4.2.1.130
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET15B
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: CAO19.7882, ORF 19.251, ORF19.7882
    Organism Common: YEAST
    Organism Scientific: CANDIDA ALBICANS
    Organism Taxid: 237561
    Strain: SC5314

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2EDO1Ligand/Ion1,2-ETHANEDIOL

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLU A:34 , LYS A:38 , THR A:150 , GLU A:152 , HOH A:483 , HOH A:566BINDING SITE FOR RESIDUE EDO A 301
2AC2SOFTWAREVAL A:59 , LYS A:69 , ASP A:73 , HOH A:444BINDING SITE FOR RESIDUE ACT A 302

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4LRU)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4LRU)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4LRU)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4LRU)

(-) Exons   (0, 0)

(no "Exon" information available for 4LRU)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:239
                                                                                                                                                                                                                                                                               
               SCOP domains d4lrua_ A: automated matches                                                                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeee.................hhhhhhhhhhhhhhhh.eeeeee.......hhhhh.....hhhhhhhhhh............ee.hhhhhhhh.eeee....hhhhhh..hhhhhhhhhhhhhh..eeeee.hhhhhhh...............ee...hhhhhhhh.hhhhhhhh...hhhhhhhhhh.ee..........eeee..eeee.hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lru A  -2 GSHMVKVLLALTSYNETFYSDGKKTGVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVVPDFLNGEDKEIFDNVNSEFNVALKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIATTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTDIGEDILGVTDIMKKGNLLTIKQVAEKEGATYIEPEGPWDNFTVTDGRIVTGVNPQSAVKTAEDVIAAFECN 236
                                     7        17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4LRU)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4LRU)

(-) Gene Ontology  (4, 4)

Asymmetric/Biological Unit(hide GO term definitions)

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