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(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN MYOSIN 5B GLOBULAR DOMAIN
 
Authors :  H. Velvarska, D. Niessing
Date :  12 Jul 13  (Deposition) - 25 Dec 13  (Release) - 15 Jan 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.11
Chains :  Asym./Biol. Unit :  A
Keywords :  Globular Domain, Cargo Binding, Rab11A, Motor Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Velvarska, D. Niessing
Structural Insights Into The Globular Tails Of The Human Type V Myosins Myo5A, Myo5B, And Myo5C.
Plos One V. 8 82065 2013
PubMed-ID: 24339992  |  Reference-DOI: 10.1371/JOURNAL.PONE.0082065

(-) Compounds

Molecule 1 - UNCONVENTIONAL MYOSIN-VB
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: GLOBULAR DOMAIN, UNP RESIDUES 1460-1848
    Gene: MYO5B, KIAA1119
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4LNZ)

(-) Sites  (0, 0)

(no "Site" information available for 4LNZ)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4LNZ)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1Leu A:1493 -Ser A:1494
2Ser A:1494 -Gly A:1495
3Arg A:1804 -Asn A:1805
4Asp A:1806 -Pro A:1807

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4LNZ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4LNZ)

(-) Exons   (0, 0)

(no "Exon" information available for 4LNZ)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:353
                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhhhh..............hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh......................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.....hhhhhhhhhhhh...hhhhhhhhhhh.......hhhhhhhhh............................................... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4lnz A 1464 KDFQGMLEYHKEDEALLIRNLVTDLKPQMLSGTVPCLPAYILYMCIRHADYTNDDLKVHSLLTSTINGIKKVLKKHNDDFEMTSFWLSNTCRLLHCLKQYSGDEGFMTQNTAKQNEHCLKNFDLTEYRQVLSDLSIQIYQQLIKIAEGVLQPMIVSAMLENESYCLEAIIRQMNAFHTVMCDQGLDPEIILQVFKQLFYMINAVTLNNLLLRKDVCSWSTGMQLRYNISQLEEWLRGRNLHQSGAVQTMEPLIQAAQLLQLKKKTQEDAEAICSLCTSLSTQQIVKILNLYTPVTVAFIRTIQAQLQERNDPQQLLLDAKHMFPVLFPFNPSSLTMDSIHIPACLNLEFLNEV 1848
                                  1473      1483      1493      1503      1513      1523      1533      1543      1553      1563      1573      1583      1593      1603      1613      1623 ||   1658      1668      1678      1688      1698      1708      1718      1728      1738      1748      1758      1768      1778  ||  1795      1805      1815      1825      1835      1845   
                                                                                                                                                                                          1625|                                                                                                                              1781|                                                           
                                                                                                                                                                                           1651                                                                                                                               1789
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4LNZ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4LNZ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4LNZ)

(-) Gene Ontology  (20, 20)

Asymmetric/Biological Unit(hide GO term definitions)

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  Sites
(no "Sites" information available for 4lnz)
 
  Cis Peptide Bonds
    Arg A:1804 - Asn A:1805   [ RasMol ]  
    Asp A:1806 - Pro A:1807   [ RasMol ]  
    Leu A:1493 - Ser A:1494   [ RasMol ]  
    Ser A:1494 - Gly A:1495   [ RasMol ]  
 

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  4lnz
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  MYO5B_HUMAN | Q9ULV0
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MYO5B_HUMAN | Q9ULV0: 4j5m 4lwz 4lx0

(-) Related Entries Specified in the PDB File

4lli