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(-) Description

Title :  CRYSTAL STRUCTURE OF A NUCLEOPORIN 35KDA (NUP35) FROM HOMO SAPIENS AT 2.46 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg), Partnership For Biology (Tcell)
Date :  03 Jul 13  (Deposition) - 11 Sep 13  (Release) - 11 Sep 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.46
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Pf05172 Family, Nup53/35/40-Type Rna Recognition Motif, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-Biology, Transport Protein, Nuclear Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  Joint Center For Structural Genomics (Jcsg), Partnership For T-Cell Biology (Tcell)
Crystal Structure Of A Nucleoporin 35Kda (Nup35) From Homo Sapiens At 2. 46 A Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - NUCLEOPORIN NUP53
    ChainsA, B
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidSPEEDET
    Expression System StrainPB1
    Expression System Taxid562
    Expression System Vector TypePLASMID
    FragmentUNP RESIDUES 151-266
    GeneBC047029, MP44, NUP35, NUP53
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    Synonym35 KDA NUCLEOPORIN, MITOTIC PHOSPHOPROTEIN 44, MP-44, NUCLEAR PORE COMPLEX PROTEIN NUP53, NUCLEOPORIN NUP35

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 8)

Asymmetric/Biological Unit (1, 8)
No.NameCountTypeFull Name
1MSE8Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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Chain A from PDB  Type:PROTEIN  Length:80
                                                                                                                
               SCOP domains d4lira_ A: automated matches                                                     SCOP domains
               CATH domains -------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhh.eeeee..hhhhhhhhhhhhh....eeeeee.....eeeeee.hhhhhhhhhh...eee...eeeeeee..hhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------- Transcript
                 4lir A 171 LDDSWVTVFGFPQASASYILLQFAQYGNILKHVmSNTGNWmHIRYQSKLQARKALSKDGRIFGESImIGVKPCIDKSVmE 250
                                   180       190       200   |   210|      220       230      |240       250
                                                           204-MSE  |                       237-MSE     249-MSE
                                                                  211-MSE                                   

Chain B from PDB  Type:PROTEIN  Length:84
                                                                                                                    
               SCOP domains d4lirb_ B: automated matches                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhh.eeeee..hhhhhhhhhhhhh....eeeeee.....eeeeee.hhhhhhhhhh....ee...ee.eeee..hhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------ Transcript
                 4lir B 169 DHLDDSWVTVFGFPQASASYILLQFAQYGNILKHVmSNTGNWmHIRYQSKLQARKALSKDGRIFGESImIGVKPCIDKSVmESS 252
                                   178       188       198     | 208  |    218       228       238       248|   
                                                             204-MSE  |                       237-MSE     249-MSE
                                                                    211-MSE                                     

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 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit

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(-) Gene Ontology  (34, 34)

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