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(-) Description

Title :  CRYSTAL STRUCTURE OF TUNGSTEN COFACTOR SYNTHESIZING PROTEIN MOAB FROM PYROCOCCUS FURIOSUS
 
Authors :  N. Havarushka, G. Schwarz
Date :  01 Jul 13  (Deposition) - 14 Aug 13  (Release) - 26 Feb 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym. Unit :  A,B,C
Biol. Unit 1:  A,B,C  (2x)
Keywords :  Adenylylation Of Molybdopterin, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  N. Havarushka, K. Fischer-Schrader, T. Lamkemeyer, G. Schwarz
Structural Basis Of Thermal Stability Of The Tungsten Cofactor Synthesis Protein Moab From Pyrococcus Furiosus.
Plos One V. 9 86030 2014
PubMed-ID: 24465852  |  Reference-DOI: 10.1371/JOURNAL.PONE.0086030

(-) Compounds

Molecule 1 - MOLYBDOPTERIN ADENYLYLTRANSFERASE
    Chains: A, B, C
    EC Number: 2.7.7.75
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: MOAB, PF0372
    Organism Scientific: PYROCOCCUS FURIOSUS
    Organism Taxid: 186497
    Strain: DSM 3638 / JCM 8422 / VC1
    Synonym: MPT ADENYLYLTRANSFERASE

 Structural Features

(-) Chains, Units

  123
Asymmetric Unit : ABC
Biological Unit 1 (2x): ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric Unit (1, 3)
No.NameCountTypeFull Name
1SO43Ligand/IonSULFATE ION
Biological Unit 1 (1, 6)
No.NameCountTypeFull Name
1SO46Ligand/IonSULFATE ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:80 , GLY A:81 , THR A:82 , GLY A:83 , ASP A:88 , PRO A:143 , GLY A:144 , HOH A:517 , HOH A:521 , HOH A:522BINDING SITE FOR RESIDUE SO4 A 201
2AC2SOFTWAREGLY B:80 , GLY B:81 , THR B:82 , GLY B:83 , ASP B:88 , PRO B:143 , GLY B:144 , HOH B:518 , HOH B:519 , HOH B:520BINDING SITE FOR RESIDUE SO4 B 201
3AC3SOFTWAREGLY C:80 , GLY C:81 , THR C:82 , GLY C:83 , PRO C:143 , GLY C:144 , HOH C:525BINDING SITE FOR RESIDUE SO4 C 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4LHB)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4LHB)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4LHB)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4LHB)

(-) Exons   (0, 0)

(no "Exon" information available for 4LHB)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:159
                                                                                                                                                                                               
               SCOP domains d4lhba_ A: automated matches                                                                                                                                    SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeehhhhhh.....hhhhhhhhhhhh..eeeeeeee..hhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhh.ee.hhhhhhhhhhhhhhhhhhhhh..eeeeee....eeeeeee..hhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lhb A  11 PKTFKFGVITVSDKGAKGEREDKSGPLIIEELSKLGEHVYYKIVPDDKIEVLIALFEAIKSGADVVVTTGGTGITRRDITIESIKPLFDKELSFGEVFRAKSYEEVGYATVLTRATAGIIRGQERIVVVFSLPGSVNAVKTGLEIIKSEVFHILKHARE 169
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160         


Chain B from PDB  Type:PROTEIN  Length:158
                                                                                                                                                                                              
               SCOP domains d4lhbb_ B: automated matches                                                                                                                                   SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeehhhhhh.....hhhhhhhhhhhhhheeeeeeee..hhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhh.ee.hhhhhhhhhhhhhhhhhhhhh..eeeeee....eeeeeee..hhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lhb B  12 KTFKFGVITVSDKGAKGEREDKSGPLIIEELSKLGEHVYYKIVPDDKIEVLIALFEAIKSGADVVVTTGGTGITRRDITIESIKPLFDKELSFGEVFRAKSYEEVGYATVLTRATAGIIRGQERIVVVFSLPGSVNAVKTGLEIIKSEVFHILKHARE 169
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161        


Chain C from PDB  Type:PROTEIN  Length:160
                                                                                                                                                                                                
               SCOP domains d4lhbc_ C: automated matches                                                                                                                                     SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeeehhhhhhh....hhhhhhhhhhhh..eeeeeeee..hhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhh.ee.hhhhhhhhhhhhhhhhhhhhh..eeeeee....eeeeeee..hhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lhb C  10 APKTFKFGVITVSDKGAKGEREDKSGPLIIEELSKLGEHVYYKIVPDDKIEVLIALFEAIKSGADVVVTTGGTGITRRDITIESIKPLFDKELSFGEVFRAKSYEEVGYATVLTRATAGIIRGQERIVVVFSLPGSVNAVKTGLEIIKSEVFHILKHARE 169
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 3)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4LHB)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4LHB)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)

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  4lhb
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