Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit
(-)Asym./Biol. Unit - sites
collapse expand < >
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)
Image Asym./Biol. Unit - sites
Asym./Biol. Unit - sites  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF A MULTILAYER-PACKED MAJOR LIGHT-HARVESTING COMPLEX
 
Authors :  T. Wan, M. Li, W. R. Chang
Date :  24 Jun 13  (Deposition) - 07 May 14  (Release) - 07 May 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.60
Chains :  Asym./Biol. Unit :  A,B,C
Keywords :  Light Collecting, Photon Protection, Grana Stacking, Chlorophyll Binding, Membrane Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  T. Wan, M. Li, X. Zhao, J. Zhang, Z. Liu, W. Chang
Crystal Structure Of A Multilayer Packed Major Light-Harvesting Complex: Implications For Grana Stacking I Higher Plants
Mol Plant 2014
PubMed-ID: 24482437  |  Reference-DOI: 10.1093/MP/SSU005

(-) Compounds

Molecule 1 - MAJOR CHLOROPHYLL A/B BINDING PROTEIN LHCB1.3
    ChainsA, B, C
    FragmentUNP RESIDUES 44-267
    Organism CommonSPINACH
    Organism ScientificSPINACIA OLERACEA
    Organism Taxid3562

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (8, 67)

Asymmetric/Biological Unit (8, 67)
No.NameCountTypeFull Name
1CAC3Ligand/IonCACODYLATE ION
2CHL18Ligand/IonCHLOROPHYLL B
3CLA24Ligand/IonCHLOROPHYLL A
4LHG3Ligand/Ion1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
5LUT6Ligand/Ion(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
6NA5Ligand/IonSODIUM ION
7NEX3Ligand/Ion(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL
8ZN5Ligand/IonZINC ION

(-) Sites  (67, 67)

Asymmetric Unit (67, 67)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREMET A:73 , PHE A:161 , ASP A:162 , PRO A:163 , LEU A:164 , ASN A:183 , SER A:190 , PHE A:194 , GLN A:197 , PRO A:205 , CHL A:312 , CLA A:314 , CLA A:316 , CLA A:317BINDING SITE FOR RESIDUE LUT A 301
02AC2SOFTWARETRP A:46 , ASP A:47 , THR A:48 , ALA A:49 , LEU A:51 , GLY A:75 , TRP A:97 , ALA A:100 , MET A:188 , CLA A:306 , CLA A:307 , CLA A:308 , CHL A:310 , CHL A:311 , HOH A:418 , CLA B:307BINDING SITE FOR RESIDUE LUT A 302
03AC3SOFTWARETYR A:112 , VAL A:138 , TYR A:141 , CLA A:308 , CHL A:310 , CHL A:312BINDING SITE FOR RESIDUE NEX A 303
04AC4SOFTWARETYR A:44 , LYS A:182 , LEU A:186 , PHE A:189 , CHL A:305 , CLA A:306 , CLA A:315 , CLA A:317 , CLA B:307BINDING SITE FOR RESIDUE LHG A 304
05AC5SOFTWAREVAL A:22 , LYS A:23 , TYR A:24 , LEU A:25 , GLY A:26 , PRO A:27 , PHE A:28 , TYR A:44 , TRP A:46 , LHG A:304 , CLA A:306 , CHL B:311 , CHL B:313BINDING SITE FOR RESIDUE CHL A 305
06AC6SOFTWARELEU A:36 , GLY A:42 , ASP A:43 , TYR A:44 , GLY A:45 , TRP A:46 , ASP A:47 , SER A:52 , ASN A:61 , ARG A:62 , GLU A:65 , HIS A:68 , ARG A:185 , MET A:188 , PHE A:189 , LUT A:302 , LHG A:304 , CHL A:305 , CLA A:307 , CHL B:313BINDING SITE FOR RESIDUE CLA A 306
07AC7SOFTWARELEU A:64 , HIS A:68 , PHE A:195 , LUT A:302 , CLA A:306 , CHL A:311 , CHL A:313 , HOH A:427 , CLA B:307 , LUT C:302 , CLA C:307BINDING SITE FOR RESIDUE CLA A 307
08AC8SOFTWARELEU A:74 , GLY A:75 , GLY A:78 , PHE A:92 , GLU A:94 , GLN A:103 , LEU A:110 , TYR A:112 , LEU A:113 , LUT A:302 , NEX A:303 , CHL A:310 , HOH A:433BINDING SITE FOR RESIDUE CLA A 308
09AC9SOFTWAREPRO A:116 , SER A:117 , LEU A:118 , VAL A:119 , HIS A:120 , ALA A:121 , GLN A:122 , SER A:123 , ALA A:126 , CYS A:130 , CHL A:310 , GLU B:107BINDING SITE FOR RESIDUE CHL A 309
10BC1SOFTWARETRP A:71 , GLY A:101 , LEU A:110 , ALA A:121 , CYS A:130 , GLN A:131 , LEU A:134 , LUT A:302 , NEX A:303 , CLA A:308 , CHL A:309 , CHL A:311 , CHL A:313 , HOH A:412 , HOH A:421 , HOH A:422BINDING SITE FOR RESIDUE CHL A 310
11BC2SOFTWAREPHE A:98 , LYS A:99 , GLY A:101 , SER A:102 , ILE A:104 , PHE A:105 , GLN A:131 , PHE A:195 , LUT A:302 , CLA A:307 , CHL A:310 , CHL A:313 , HOH A:412 , HOH A:436 , HOH A:458 , CHL C:305BINDING SITE FOR RESIDUE CHL A 311
12BC3SOFTWAREILE A:67 , ARG A:70 , TRP A:71 , VAL A:138 , TYR A:141 , ARG A:142 , GLY A:146 , PRO A:147 , LEU A:148 , GLY A:149 , PRO A:154 , PRO A:157 , SER A:160 , PHE A:161 , PRO A:163 , LUT A:301 , NEX A:303 , CLA A:314 , HOH A:425 , HOH A:426BINDING SITE FOR RESIDUE CHL A 312
13BC4SOFTWAREGLU A:63 , LEU A:64 , HIS A:68 , TRP A:71 , GLN A:131 , MET A:135 , GLY A:136 , GLU A:139 , ARG A:142 , ILE A:143 , PHE A:192 , CLA A:307 , CHL A:310 , CHL A:311 , TRP C:46 , THR C:48 , CHL C:305 , CLA C:306BINDING SITE FOR RESIDUE CHL A 313
14BC5SOFTWAREARG A:70 , MET A:73 , TYR A:156 , PRO A:157 , GLY A:158 , PHE A:161 , LEU A:166 , PHE A:173 , LEU A:176 , GLU A:180 , LUT A:301 , CHL A:312 , CLA A:316BINDING SITE FOR RESIDUE CLA A 314
15BC6SOFTWARETRP A:16 , LYS A:179 , LYS A:182 , ASN A:183 , LHG A:304 , CLA A:316BINDING SITE FOR RESIDUE CLA A 315
16BC7SOFTWARELYS A:179 , ASN A:183 , LEU A:186 , LUT A:301 , CLA A:314 , CLA A:315BINDING SITE FOR RESIDUE CLA A 316
17BC8SOFTWAREPHE A:189 , SER A:190 , GLY A:193 , GLN A:197 , THR A:201 , ASN A:208 , HIS A:212 , ASN A:220 , ALA A:221 , LUT A:301 , LHG A:304 , CLA A:318 , TRP B:128BINDING SITE FOR RESIDUE CLA A 317
18BC9SOFTWAREHIS A:212 , LEU A:213 , PRO A:216 , ASN A:220 , CLA A:317BINDING SITE FOR RESIDUE CLA A 318
19CC1SOFTWAREGLU A:107 , GLY A:108 , ZN A:321 , GLY B:108 , HIS B:120 , GLN B:122 , CAC B:319BINDING SITE FOR RESIDUE CAC A 319
20CC2SOFTWAREASP A:54 , GLU B:31 , ASP B:54 , ASP C:54 , HOH C:449BINDING SITE FOR RESIDUE ZN A 320
21CC3SOFTWAREGLU A:107 , CAC A:319 , HIS B:120BINDING SITE FOR RESIDUE ZN A 321
22CC4SOFTWAREGLU A:207 , ASP A:211 , HOH A:453BINDING SITE FOR RESIDUE ZN A 322
23CC5SOFTWAREMET B:73 , PHE B:161 , ASP B:162 , PRO B:163 , LEU B:164 , ASN B:183 , SER B:190 , PHE B:194 , GLN B:197 , PRO B:205 , CHL B:312 , CLA B:314 , CLA B:316 , CLA B:317BINDING SITE FOR RESIDUE LUT B 301
24CC6SOFTWARETRP B:46 , ASP B:47 , THR B:48 , ALA B:49 , HIS B:68 , TRP B:71 , ALA B:72 , CYS B:79 , TRP B:97 , MET B:188 , MET B:191 , CLA B:306 , CLA B:307 , CLA B:308 , CHL B:310 , CHL B:311 , HOH B:427 , CLA C:307 , CHL C:313BINDING SITE FOR RESIDUE LUT B 302
25CC7SOFTWARETYR B:112 , VAL B:138 , TYR B:141 , CLA B:308 , CHL B:310 , CHL B:312BINDING SITE FOR RESIDUE NEX B 303
26CC8SOFTWARETYR B:44 , LYS B:182 , LEU B:186 , CHL B:305 , CLA B:306 , CLA B:315 , CLA B:317BINDING SITE FOR RESIDUE LHG B 304
27CC9SOFTWAREVAL B:22 , LYS B:23 , TYR B:24 , LEU B:25 , GLY B:26 , TRP B:46 , LHG B:304 , CLA B:306 , CHL C:311 , CHL C:313BINDING SITE FOR RESIDUE CHL B 305
28DC1SOFTWARELEU B:36 , PRO B:41 , GLY B:42 , TYR B:44 , GLY B:45 , TRP B:46 , ASP B:47 , SER B:52 , ASN B:61 , ARG B:62 , GLU B:65 , HIS B:68 , ARG B:185 , MET B:188 , PHE B:189 , LUT B:302 , LHG B:304 , CHL B:305 , CLA B:307 , CHL C:313BINDING SITE FOR RESIDUE CLA B 306
29DC2SOFTWARELUT A:302 , LHG A:304 , CLA A:307 , HIS B:68 , PHE B:195 , LUT B:302 , CLA B:306 , CHL B:311 , CHL B:313 , HOH B:402 , CLA C:307BINDING SITE FOR RESIDUE CLA B 307
30DC3SOFTWARELEU B:74 , GLY B:78 , PHE B:92 , GLU B:94 , GLN B:103 , LEU B:110 , TYR B:112 , LEU B:113 , LEU B:118 , LUT B:302 , NEX B:303 , CHL B:310 , HOH B:426BINDING SITE FOR RESIDUE CLA B 308
31DC4SOFTWAREPRO B:116 , SER B:117 , LEU B:118 , VAL B:119 , HIS B:120 , ALA B:121 , GLN B:122 , SER B:123 , CYS B:130 , CHL B:310BINDING SITE FOR RESIDUE CHL B 309
32DC5SOFTWARETRP B:71 , GLY B:101 , LEU B:110 , ALA B:121 , ILE B:127 , CYS B:130 , GLN B:131 , LEU B:134 , LUT B:302 , NEX B:303 , CLA B:308 , CHL B:309 , CHL B:311 , CHL B:313 , HOH B:401 , HOH B:412 , HOH B:418BINDING SITE FOR RESIDUE CHL B 310
33DC6SOFTWARECHL A:305 , PHE B:98 , LYS B:99 , GLY B:101 , SER B:102 , ILE B:104 , PHE B:105 , GLN B:131 , PHE B:195 , LUT B:302 , CLA B:307 , CHL B:310 , CHL B:313 , HOH B:401 , HOH B:446BINDING SITE FOR RESIDUE CHL B 311
34DC7SOFTWAREARG B:70 , TRP B:71 , LEU B:74 , VAL B:138 , TYR B:141 , ARG B:142 , GLY B:146 , PRO B:147 , LEU B:148 , GLY B:149 , PRO B:154 , PRO B:157 , SER B:160 , PHE B:161 , PRO B:163 , LUT B:301 , NEX B:303 , CLA B:314 , HOH B:414 , HOH B:424BINDING SITE FOR RESIDUE CHL B 312
35DC8SOFTWARETRP A:46 , THR A:48 , CHL A:305 , CLA A:306 , GLU B:63 , LEU B:64 , HIS B:68 , TRP B:71 , GLN B:131 , MET B:135 , GLY B:136 , GLU B:139 , ARG B:142 , ILE B:143 , PHE B:192 , ILE B:199 , CLA B:307 , CHL B:310 , CHL B:311BINDING SITE FOR RESIDUE CHL B 313
36DC9SOFTWAREARG B:70 , MET B:73 , TYR B:156 , PRO B:157 , GLY B:158 , PHE B:161 , LEU B:166 , PHE B:173 , LEU B:176 , GLU B:180 , LUT B:301 , CHL B:312 , CLA B:316BINDING SITE FOR RESIDUE CLA B 314
37EC1SOFTWARETRP B:16 , LYS B:179 , LYS B:182 , LHG B:304 , CLA B:316BINDING SITE FOR RESIDUE CLA B 315
38EC2SOFTWARELYS B:179 , ASN B:183 , LEU B:186 , LUT B:301 , CLA B:314 , CLA B:315BINDING SITE FOR RESIDUE CLA B 316
39EC3SOFTWAREPHE B:189 , SER B:190 , GLY B:193 , GLN B:197 , THR B:201 , ASN B:208 , HIS B:212 , ASN B:220 , ALA B:221 , LUT B:301 , LHG B:304 , CLA B:318 , TRP C:128BINDING SITE FOR RESIDUE CLA B 317
40EC4SOFTWAREHIS B:212 , LEU B:213 , ASN B:220 , CLA B:317BINDING SITE FOR RESIDUE CLA B 318
41EC5SOFTWAREGLY A:108 , HIS A:120 , GLN A:122 , CAC A:319 , GLU B:107 , GLY B:108 , ZN B:321BINDING SITE FOR RESIDUE CAC B 319
42EC6SOFTWAREGLU B:207 , ASP B:211 , HOH B:444BINDING SITE FOR RESIDUE NA B 320
43EC7SOFTWAREHIS A:120 , GLU B:107 , CAC B:319BINDING SITE FOR RESIDUE ZN B 321
44EC8SOFTWARESER A:34 , HOH A:454 , ASP B:20 , GLU B:56BINDING SITE FOR RESIDUE NA B 322
45EC9SOFTWAREMET C:73 , PHE C:161 , ASP C:162 , PRO C:163 , LEU C:164 , ASN C:183 , ALA C:187 , SER C:190 , PHE C:194 , GLN C:197 , PRO C:205 , CLA C:314 , CLA C:316 , CLA C:317BINDING SITE FOR RESIDUE LUT C 301
46FC1SOFTWARECLA A:307 , TRP C:46 , ASP C:47 , THR C:48 , ALA C:49 , HIS C:68 , ALA C:72 , CYS C:79 , TRP C:97 , ALA C:100 , MET C:188 , MET C:191 , CLA C:306 , CLA C:307 , CLA C:308 , CHL C:310 , CHL C:311 , HOH C:430BINDING SITE FOR RESIDUE LUT C 302
47FC2SOFTWARETYR C:112 , LEU C:134 , VAL C:138 , TYR C:141 , PRO C:147 , CLA C:308 , CHL C:310 , CHL C:312BINDING SITE FOR RESIDUE NEX C 303
48FC3SOFTWARETYR C:44 , LYS C:182 , LEU C:186 , CHL C:305 , CLA C:315 , CLA C:317 , HOH C:427BINDING SITE FOR RESIDUE LHG C 304
49FC4SOFTWARECHL A:311 , CHL A:313 , TYR C:24 , LEU C:25 , GLY C:26 , PRO C:27 , PHE C:28 , TRP C:46 , LHG C:304 , CLA C:306BINDING SITE FOR RESIDUE CHL C 305
50FC5SOFTWARECHL A:313 , LEU C:36 , PRO C:41 , GLY C:42 , TYR C:44 , GLY C:45 , TRP C:46 , ASP C:47 , LEU C:51 , SER C:52 , ASN C:61 , ARG C:62 , GLU C:65 , HIS C:68 , ARG C:185 , MET C:188 , PHE C:189 , LUT C:302 , CHL C:305 , CLA C:307BINDING SITE FOR RESIDUE CLA C 306
51FC6SOFTWARECLA A:307 , LUT B:302 , CLA B:307 , LEU C:64 , HIS C:68 , PHE C:195 , LUT C:302 , CLA C:306 , CHL C:311 , CHL C:313 , HOH C:424BINDING SITE FOR RESIDUE CLA C 307
52FC7SOFTWARELEU C:74 , GLY C:78 , PHE C:81 , PHE C:92 , GLU C:94 , GLN C:103 , LEU C:110 , TYR C:112 , LEU C:113 , LEU C:118 , LUT C:302 , NEX C:303 , CHL C:310 , HOH C:412BINDING SITE FOR RESIDUE CLA C 308
53FC8SOFTWAREGLU C:107 , PRO C:116 , SER C:117 , LEU C:118 , VAL C:119 , HIS C:120 , ALA C:121 , GLN C:122 , SER C:123 , ALA C:126 , CHL C:310BINDING SITE FOR RESIDUE CHL C 309
54FC9SOFTWAREGLY C:101 , ALA C:121 , CYS C:130 , GLN C:131 , LEU C:134 , LUT C:302 , NEX C:303 , CLA C:308 , CHL C:309 , CHL C:311 , CHL C:313 , HOH C:417 , HOH C:429 , HOH C:431BINDING SITE FOR RESIDUE CHL C 310
55GC1SOFTWARECHL B:305 , PHE C:98 , LYS C:99 , GLY C:101 , SER C:102 , ILE C:104 , PHE C:105 , GLN C:131 , PHE C:195 , LUT C:302 , CLA C:307 , CHL C:310 , CHL C:313 , HOH C:417 , HOH C:452BINDING SITE FOR RESIDUE CHL C 311
56GC2SOFTWAREILE C:67 , ARG C:70 , TRP C:71 , LEU C:74 , VAL C:138 , TYR C:141 , ARG C:142 , GLY C:146 , PRO C:147 , LEU C:148 , GLY C:149 , PRO C:154 , PRO C:157 , SER C:160 , PHE C:161 , PRO C:163 , NEX C:303 , CLA C:314 , HOH C:418 , HOH C:421 , HOH C:432BINDING SITE FOR RESIDUE CHL C 312
57GC3SOFTWARETYR B:24 , TRP B:46 , THR B:48 , LUT B:302 , CHL B:305 , CLA B:306 , GLU C:63 , LEU C:64 , HIS C:68 , TRP C:71 , GLN C:131 , MET C:135 , GLY C:136 , GLU C:139 , ARG C:142 , ILE C:143 , PHE C:192 , ILE C:199 , CLA C:307 , CHL C:310 , CHL C:311BINDING SITE FOR RESIDUE CHL C 313
58GC4SOFTWAREARG C:70 , MET C:73 , TYR C:156 , PRO C:157 , GLY C:158 , PHE C:161 , LEU C:166 , PHE C:173 , LEU C:176 , GLU C:180 , LUT C:301 , CHL C:312 , CLA C:316BINDING SITE FOR RESIDUE CLA C 314
59GC5SOFTWARETRP C:16 , VAL C:80 , LYS C:179 , LYS C:182 , ASN C:183 , LHG C:304 , CLA C:316BINDING SITE FOR RESIDUE CLA C 315
60GC6SOFTWARELYS C:179 , ASN C:183 , LEU C:186 , LUT C:301 , CLA C:314 , CLA C:315BINDING SITE FOR RESIDUE CLA C 316
61GC7SOFTWARETRP A:128 , PHE C:189 , SER C:190 , GLY C:193 , GLN C:197 , ASN C:208 , HIS C:212 , ASN C:220 , ALA C:221 , LUT C:301 , LHG C:304 , CLA C:318BINDING SITE FOR RESIDUE CLA C 317
62GC8SOFTWAREHIS C:212 , LEU C:213 , ASN C:220 , CLA C:317 , HOH C:443BINDING SITE FOR RESIDUE CLA C 318
63GC9SOFTWAREGLU C:107 , GLY C:108 , HIS C:120 , GLN C:122 , ZN C:321BINDING SITE FOR RESIDUE CAC C 319
64HC1SOFTWARELYS C:203 , GLU C:207 , ASP C:211 , HOH C:447 , HOH C:450BINDING SITE FOR RESIDUE NA C 320
65HC2SOFTWAREGLU C:107 , HIS C:120 , CAC C:319BINDING SITE FOR RESIDUE ZN C 321
66HC3SOFTWAREGLU C:171BINDING SITE FOR RESIDUE NA C 322
67HC4SOFTWAREGLU B:31 , ASP C:54 , HOH C:449BINDING SITE FOR RESIDUE NA C 323

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4LCZ)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4LCZ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4LCZ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4LCZ)

(-) Exons   (0, 0)

(no "Exon" information available for 4LCZ)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:208
                                                                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhh........................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhh....hhhhh.......hhhhhhhhhhhhhhhhhhhhhhh............hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lcz A  14 SPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 221
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213        

Chain B from PDB  Type:PROTEIN  Length:208
                                                                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhh.......................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhh....hhhhh.......hhhhhhhhhhhhhhhhhhhhhhh............hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lcz B  14 SPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 221
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213        

Chain C from PDB  Type:PROTEIN  Length:208
                                                                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhh.......................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhh....hhhhh.......hhhhhhhhhhhhhhhhhhhhhhh............hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lcz C  14 SPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 221
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213        

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4LCZ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4LCZ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4LCZ)

(-) Gene Ontology  (13, 24)

Asymmetric/Biological Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    CAC  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    CHL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    CLA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    LHG  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    LUT  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    NA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    NEX  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    ZN  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
    CC2  [ RasMol ]  +environment [ RasMol ]
    CC3  [ RasMol ]  +environment [ RasMol ]
    CC4  [ RasMol ]  +environment [ RasMol ]
    CC5  [ RasMol ]  +environment [ RasMol ]
    CC6  [ RasMol ]  +environment [ RasMol ]
    CC7  [ RasMol ]  +environment [ RasMol ]
    CC8  [ RasMol ]  +environment [ RasMol ]
    CC9  [ RasMol ]  +environment [ RasMol ]
    DC1  [ RasMol ]  +environment [ RasMol ]
    DC2  [ RasMol ]  +environment [ RasMol ]
    DC3  [ RasMol ]  +environment [ RasMol ]
    DC4  [ RasMol ]  +environment [ RasMol ]
    DC5  [ RasMol ]  +environment [ RasMol ]
    DC6  [ RasMol ]  +environment [ RasMol ]
    DC7  [ RasMol ]  +environment [ RasMol ]
    DC8  [ RasMol ]  +environment [ RasMol ]
    DC9  [ RasMol ]  +environment [ RasMol ]
    EC1  [ RasMol ]  +environment [ RasMol ]
    EC2  [ RasMol ]  +environment [ RasMol ]
    EC3  [ RasMol ]  +environment [ RasMol ]
    EC4  [ RasMol ]  +environment [ RasMol ]
    EC5  [ RasMol ]  +environment [ RasMol ]
    EC6  [ RasMol ]  +environment [ RasMol ]
    EC7  [ RasMol ]  +environment [ RasMol ]
    EC8  [ RasMol ]  +environment [ RasMol ]
    EC9  [ RasMol ]  +environment [ RasMol ]
    FC1  [ RasMol ]  +environment [ RasMol ]
    FC2  [ RasMol ]  +environment [ RasMol ]
    FC3  [ RasMol ]  +environment [ RasMol ]
    FC4  [ RasMol ]  +environment [ RasMol ]
    FC5  [ RasMol ]  +environment [ RasMol ]
    FC6  [ RasMol ]  +environment [ RasMol ]
    FC7  [ RasMol ]  +environment [ RasMol ]
    FC8  [ RasMol ]  +environment [ RasMol ]
    FC9  [ RasMol ]  +environment [ RasMol ]
    GC1  [ RasMol ]  +environment [ RasMol ]
    GC2  [ RasMol ]  +environment [ RasMol ]
    GC3  [ RasMol ]  +environment [ RasMol ]
    GC4  [ RasMol ]  +environment [ RasMol ]
    GC5  [ RasMol ]  +environment [ RasMol ]
    GC6  [ RasMol ]  +environment [ RasMol ]
    GC7  [ RasMol ]  +environment [ RasMol ]
    GC8  [ RasMol ]  +environment [ RasMol ]
    GC9  [ RasMol ]  +environment [ RasMol ]
    HC1  [ RasMol ]  +environment [ RasMol ]
    HC2  [ RasMol ]  +environment [ RasMol ]
    HC3  [ RasMol ]  +environment [ RasMol ]
    HC4  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 4lcz)
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  4lcz
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  B3WFZ6_SPIOL | B3WFZ6
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
  CB2A_SPIOL | P12333
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  B3WFZ6_SPIOL | B3WFZ6
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  CB2A_SPIOL | P12333
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CB2A_SPIOL | P123331rwt 3jcu

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4LCZ)