4L7V - JenaLib

Title :   CRYSTAL STRUCTURE OF PROTEIN L-ISOASPARTYL-O-METHYLTRANSFERASE OF VIBRIO CHOLERAE

Authors :   T. Chatterjee, D. Mukherjee, P. Chakrabarti

Date :   14 Jun 13 (Deposition) - 18 Jun 14 (Release) - 16 Sep 15 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.05

Chains :   Asym./Biol. Unit : A

Keywords :   Rossmann Fold, Protein Repair, Isoaspartyl Peptides, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   T. Chatterjee, D. Mukherjee, M. Banerjee, B. K. Chatterjee, P. Chakrabarti
Crystal Structure And Activity Of Protein L-Isoaspartyl-O-Methyltransferase From Vibrio Cholerae, And The Effect Of Adohcy Binding.
Arch. Biochem. Biophys. V. 583 140 2015
PubMed-ID: 26255776 | Reference-DOI: 10.1016/J.ABB.2015.08.001

Compounds

Molecule 1 - PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE
	Chains	:	A
	EC Number	:	2.1.1.77
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET28A(+)
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	PCM, VC0395_A0060, VC395_0549
	Organism Scientific	:	VIBRIO CHOLERAE
	Organism Taxid	:	345073
	Strain	:	O395
	Synonym	:	L-ISOASPARTYL PROTEIN CARBOXYL METHYLTRANSFERASE, PROTEIN L- ISOASPARTYL METHYLTRANSFERASE, PROTEIN-BETA-ASPARTATE METHYLTRANSFERASE, PIMT

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 3)

Sites (3, 3)

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	GLY A:83 , THR A:84 , GLY A:85 , SER A:86 , TYR A:88 , GLN A:89 , VAL A:103 , GLU A:104 , ARG A:105 , ILE A:106 , LEU A:109 , ASP A:131 , GLY A:132 , THR A:148 , PRO A:201 , LEU A:202 , VAL A:203 , HOH A:422 , HOH A:443	BINDING SITE FOR RESIDUE SAH A 301
2	AC2	SOFTWARE	GLY A:17 , ASP A:206 , HOH A:450 , HOH A:451 , HOH A:453 , HOH A:454	BINDING SITE FOR RESIDUE CA A 302
3	AC3	SOFTWARE	ARG A:105 , VAL A:154 , TYR A:180 , SER A:191 , HOH A:401	BINDING SITE FOR RESIDUE ACT A 303

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:186
                                                                                                                                                                                                                          
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhh...hhhhhhhhhh.hhhhh....hhhhhhhhhhhh......eeeee....hhhhhhhhh...eeeeee.hhhhhhhhhhhhhhh....eeeee.hhhhh......eeeeee.......hhhhhhheeeeeeeeeeee...eeeeeeeee..eeeeeeeee............ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4l7v A   3 NPKADRLIQFLTEQGITSPQVLAAIHALPREFFVAPSQPYIVAKMTELLALTPETKVLEIGTGSGYQTAVLAKLVNHVFTVERIKTLQWDAKRRLKQLDIYNVSTKHGDGWQGWPARGPFDAILVTAAAAKVPQSLLDQLAEGGRMVIPVGEDEQYLYKIVRQGGQFISERVEAVRFVPLVAGDLA 208
                                    12        22        32     || 62        72        82        92       102       112       122       132       142       152       162       172       182       192       202      
                                                              38|                                                                                                                                                     
                                                               59

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (8, 8)

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