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(-) Description

Title :  STRUCTURE OF THE MICROTUBULE ASSOCIATED PROTEIN PRC1 (PROTEIN REGULATOR OF CYTOKINESIS 1)
 
Authors :  R. Subramanian, S. Ti, L. Tan, S. A. Darst, T. M. Kapoor
Date :  06 Jun 13  (Deposition) - 17 Jul 13  (Release) - 07 Aug 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.60
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Spectrin, Helical, Coiled-Coil, Microtubule Binding, Microtubule Crosslinking, Spindle Midzone, Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. Subramanian, S. C. Ti, L. Tan, S. A. Darst, T. M. Kapoor
Marking And Measuring Single Microtubules By Prc1 And Kinesin-4.
Cell(Cambridge, Mass. ) V. 154 377 2013
PubMed-ID: 23870126  |  Reference-DOI: 10.1016/J.CELL.2013.06.021

(-) Compounds

Molecule 1 - PROTEIN REGULATOR OF CYTOKINESIS 1
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21-ROSETTA
    Expression System Taxid: 511693
    Expression System Vector Type: PET DUET-1
    Fragment: UNP RESIDUES 1-468
    Gene: PRC1
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 26)

Asymmetric/Biological Unit (1, 26)
No.NameCountTypeFull Name
1MSE26Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 4L3I)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4L3I)

(-) Cis Peptide Bonds  (18, 18)

Asymmetric/Biological Unit
No.Residues
1Glu A:93 -Thr A:94
2His A:139 -Tyr A:140
3Ile A:142 -Asp A:143
4Glu A:205 -Asp A:206
5Ala A:207 -Phe A:208
6Phe A:309 -Tyr A:310
7Gly A:383 -Asn A:384
8Ser A:418 -Lys A:419
9Gln A:426 -Lys A:427
10His B:139 -Tyr B:140
11Ile B:142 -Asp B:143
12Glu B:205 -Asp B:206
13Ala B:207 -Phe B:208
14Phe B:309 -Tyr B:310
15Gly B:383 -Asn B:384
16Ser B:418 -Lys B:419
17Gln B:426 -Lys B:427
18Lys B:427 -Phe B:428

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4L3I)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4L3I)

(-) Exons   (0, 0)

(no "Exon" information available for 4L3I)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:449
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4l3i A   2 RRSEVLAEESIVCLQKALNHLREIWELIGIPEDQRLQRTEVVKKHIKELLDmmIAEEESLKERLIKSISVCQKELNTLCSELHVEPFQEEGETTILQLEKDLRTQVELmRKQKKERKQELKLLQEQDQELCEILCmPHYDIDSASVPSLEELNQFRQHVTTLRETKASRREEFVSIKRQIILCmEELDHTPDTSFERDVVCEDEDAFCLSLENIATLQKLLRQLEmQKSQNEAVCEGLRTQIRELWDRLQIPEEEREAVATImSGSKAKVRKALQLEVDRLEELKmQNmKKVIEAIRVELVQYWDQCFYSQEQRQAFAPFCAEDYTESLLQLHDAEIVRLKNYYEVHKELFEGVQKWEETWRLFLEFERKASDPNRFTNRGGNLLKEEKQRAKLQKmLPKLEEELKARIELWEQEHSKAFmVNGQKFmEYVAEQWEmHRLEKERAKQER 450
                                    11        21        31        41        51 ||     61        71        81        91       101       111       121       131     | 141       151       161       171       181   |   191       201       211       221     | 231       241       251       261  |    271       281     | 291       301       311       321       331       341       351       361       371       381       391      |401       411       421|      431      |441         
                                                                              53-MSE                                                  110-MSE                    137-MSE                                         185-MSE                                   227-MSE                              264-MSE                287-MSE                                                                                                        398-MSE                 422-MSE  |      438-MSE        
                                                                               54-MSE                                                                                                                                                                                                                                     290-MSE                                                                                                                                    429-MSE                 


Chain B from PDB  Type:PROTEIN  Length:443
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4l3i B   2 RRSEVLAEESIVCLQKALNHLREIWELIGIPEDQRLQRTEVVKKHIKELLDmmIAEEESLKERLIKSISVCQKELNTLCSELHVEPFQEEGETTILQLEKDLRTQVELmRKQKKERKQELKLLQEQDQELCEILCmPHYDIDSASVPSLEELNQFRQHVTTLRETKASRREEFVSIKRQIILCmEELDHTPDTSFERDVVCEDEDAFCLSLENIATLQKLLRQLEmQKSQNEAVCEGLRTQIRELWDRLQIPEEEREAVATImSGSKAKVRKALQLEVDRLEELKmQNmKKVIEAIRVELVQYWDQCFYSQEQRQAFAPFCAEDYTESLLQLHDAEIVRLKNYYEVHKELFEGVQKWEETWRLFLEFERKASDPNRFTNRGGNLLKEEKQRAKLQKmLPKLEEELKARIELWEQEHSKAFmVNGQKFmEYVAEQWEmHRLEKE 444
                                    11        21        31        41        51 ||     61        71        81        91       101       111       121       131     | 141       151       161       171       181   |   191       201       211       221     | 231       241       251       261  |    271       281     | 291       301       311       321       331       341       351       361       371       381       391      |401       411       421|      431      |441   
                                                                              53-MSE                                                  110-MSE                    137-MSE                                         185-MSE                                   227-MSE                              264-MSE                287-MSE                                                                                                        398-MSE                 422-MSE  |      438-MSE  
                                                                               54-MSE                                                                                                                                                                                                                                     290-MSE                                                                                                                                    429-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4L3I)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4L3I)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4L3I)

(-) Gene Ontology  (25, 25)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Ala A:207 - Phe A:208   [ RasMol ]  
    Ala B:207 - Phe B:208   [ RasMol ]  
    Gln A:426 - Lys A:427   [ RasMol ]  
    Gln B:426 - Lys B:427   [ RasMol ]  
    Glu A:205 - Asp A:206   [ RasMol ]  
    Glu A:93 - Thr A:94   [ RasMol ]  
    Glu B:205 - Asp B:206   [ RasMol ]  
    Gly A:383 - Asn A:384   [ RasMol ]  
    Gly B:383 - Asn B:384   [ RasMol ]  
    His A:139 - Tyr A:140   [ RasMol ]  
    His B:139 - Tyr B:140   [ RasMol ]  
    Ile A:142 - Asp A:143   [ RasMol ]  
    Ile B:142 - Asp B:143   [ RasMol ]  
    Lys B:427 - Phe B:428   [ RasMol ]  
    Phe A:309 - Tyr A:310   [ RasMol ]  
    Phe B:309 - Tyr B:310   [ RasMol ]  
    Ser A:418 - Lys A:419   [ RasMol ]  
    Ser B:418 - Lys B:419   [ RasMol ]  
 

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  4l3i
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  PRC1_HUMAN | O43663
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PRC1_HUMAN | O43663: 3nrx 3nry 4l6y 5kmg

(-) Related Entries Specified in the PDB File

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