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(-) Description

Title :  THE STRUCTURE OF THE PERIPLASMIC L-ARABINOSE BINDING PROTEIN FROM BURKHOLDERIA THAILANDENSIS
 
Authors :  Seattle Structural Genomics Center For Infectious Disease (S
Date :  30 May 13  (Deposition) - 26 Jun 13  (Release) - 17 Feb 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.50
Chains :  Asym./Biol. Unit :  A
Keywords :  L-Arabinose, Beta-D-Galactose, Abc Transporter, Periplasmic Binding Protein, Ssgcid, Seattle Structural Genomics Center For Infectious Disease, Niaid, National Institute Of Allergy And Infectious Diseases, Sugar Binding, Sugar Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. C. Clifton, J. W. Fairman
The Structure Of The Periplasmic L-Arabinose Binding Protei From Burkholderia Thailandensis
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - L-ARABINOSE ABC TRANSPORTER, PERIPLASMIC L-ARABINOSE- BINDING PROTEIN
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    GeneBTH_II1196
    Organism ScientificBURKHOLDERIA THAILANDENSIS
    Organism Taxid271848
    StrainE264

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1GAL1Ligand/IonBETA-D-GALACTOSE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELYS A:40 , ASP A:44 , TRP A:46 , ASP A:119 , ASP A:120 , ILE A:138 , ARG A:181 , ASN A:235 , ASN A:262 , HOH A:705 , HOH A:711 , HOH A:828BINDING SITE FOR RESIDUE GAL A 600

(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:301
                                                                                                                                                                                                                                                                                                                                             
               SCOP domains d4kzka_ A: automated matches                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee....hhhhhhhhhhhhhhhhhhh.eeeeee..hhhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhhhhh..eeeee................eeeehhhhhhhhhhhhhhhhhhhh..hhhhheeeeee...hhhhhhhhhhhhhhhhhh..hhh.eeeee....hhhhhhhhhhhhhhhh.....eeee..hhhhhhhhhhhhhhh..hhh.eeeeeee.hhhhhhhhhh.....eeeeee.hhhhhhhhhhhhhhhhhhhh.....eeee..eeee..hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4kzk A  33 VKIGFVVKQPDDPWFQDEWRFAEQAAKDKHFTLVKIAAPSGEKVSTALDSLAAQKAQGVIICAPDVKLGPGIAAKAKRYGMKLMSVDDQLVDGRGAPLADVPHMGISAYRIGRQVGDAIAAEAKRRGWNPAEVGVLRLAYDQLPTARERTTGAVDALKAAGFAAANVVDAPEMTADTEGAFNAANIAFTKHRNFRHWVAFGSNDDTTVGAVRAGEGRGIGTDDMIAVGINGSQVALNEFAKPKPTGFFGSILLNPRLHGYDTSVNMYDWITQNRTPPPLVLTSGTLITRANEKTARAQLGL 333
                                    42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332 

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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (4, 4)

Asymmetric/Biological Unit(hide GO term definitions)

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