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(-) Description

Title :  CRYSTAL STRUCTURE OF A GLUTATHIONE TRANSFERASE FAMILY MEMBER FROM RALSTONIA SOLANACEARUM, TARGET EFI-501780, WITH BOUND GSH COORDINATED TO A ZINC ION, ORDERED ACTIVE SITE
 
Authors :  M. W. Vetting, R. Toro, R. Bhosle, N. F. Al Obaidi, L. L. Morisco, S. R. Wa S. Sojitra, M. Stead, E. Washington, A. Scott Glenn, S. Chowdhury, B. J. Hammonds, B. Hillerich, J. Love, R. D. Seidel, H. J. Imker, J. A. Gerl R. N. Armstrong, S. C. Almo, Enzyme Function Initiative (Efi)
Date :  26 Apr 13  (Deposition) - 22 May 13  (Release) - 22 May 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Glutathione S-Transferase Fold, Enzyme Function Initiative, Efi, Structural Genomics, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. W. Vetting, R. Toro, R. Bhosle, N. F. Al Obaidi, L. L. Morisco, S. R. Wasserman, S. Sojitra, M. Stead, E. Washington, A. Scott Glenn, S. Chowdhury, B. Evans, J. Hammonds, B. Hillerich, J. Love, R. D. Seidel, H. J. Imker, J. A. Gerlt, R. N. Armstrong, S. C. Almo, Enzyme Function Initiative (Efi)
Crystal Structure Of A Glutathione Transferase Family Membe From Ralstonia Solanacearum, Target Efi-501780, With Bound Gsh Coordinated To A Zinc Ion, Ordered Active Site
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - GLUTATHIONE S-TRANSFERASE PROTEIN
    Chains: A
    EC Number: 2.5.1.18
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: GSTG, RSIPO_01298
    Organism Scientific: RALSTONIA SOLANACEARUM
    Organism Taxid: 564066

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 8)

Asymmetric Unit (3, 8)
No.NameCountTypeFull Name
1ACT3Ligand/IonACETATE ION
2GSH1Ligand/IonGLUTATHIONE
3ZN4Ligand/IonZINC ION
Biological Unit 1 (2, 8)
No.NameCountTypeFull Name
1ACT6Ligand/IonACETATE ION
2GSH2Ligand/IonGLUTATHIONE
3ZN-1Ligand/IonZINC ION

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLU A:18 , HIS A:224 , GLU A:297 , ACT A:407BINDING SITE FOR RESIDUE ZN A 401
2AC2SOFTWAREPRO A:15 , GSH A:405 , ACT A:406 , ACT A:408 , HOH A:501BINDING SITE FOR RESIDUE ZN A 402
3AC3SOFTWAREHIS A:79BINDING SITE FOR RESIDUE ZN A 403
4AC4SOFTWAREGLU A:234 , ASP A:249BINDING SITE FOR RESIDUE ZN A 404
5AC5SOFTWARETYR A:11 , SER A:14 , PRO A:15 , PHE A:16 , VAL A:38 , LYS A:42 , ARG A:53 , ARG A:54 , THR A:55 , ASP A:67 , THR A:68 , ARG A:137 , MET A:140 , TYR A:275 , ZN A:402 , ACT A:406 , ACT A:408 , HOH A:502 , HOH A:504 , HOH A:599BINDING SITE FOR RESIDUE GSH A 405
6AC6SOFTWAREARG A:137 , MET A:140 , ZN A:402 , GSH A:405 , ACT A:408 , HOH A:501 , HOH A:696BINDING SITE FOR RESIDUE ACT A 406
7AC7SOFTWAREGLU A:18 , ARG A:21 , HIS A:224 , GLU A:297 , GLN A:303 , ZN A:401BINDING SITE FOR RESIDUE ACT A 407
8AC8SOFTWARETYR A:11 , THR A:13 , PHE A:133 , ARG A:137 , PHE A:195 , ZN A:402 , GSH A:405 , ACT A:406 , HOH A:501BINDING SITE FOR RESIDUE ACT A 408

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4KF9)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric Unit
No.Residues
1Leu A:40 -Pro A:41
2Thr A:55 -Pro A:56
3Val A:81 -Pro A:82

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4KF9)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
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  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:318
                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eeee...hhhhhhhhhhhhhh...eeeee.........hhhhhh......eeee..eeeehhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eee.hhhhhhhhhhhh.hhhhh.hhhhh............eeeeee.......eeeeeeee...eeeeeeee...eeeeeeee...eeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4kf9 A   2 VMTELILHHYATSPFSEKARLILGYKDQPWKSVTVPVILPKPDVMPLTGGYRRTPFLQIGADIYCDTALIAQVLESIHPVPTLYPADRAAAAFAMAQWADTTLFWAAASFVGQPEGFKSLMAGLPEDFVKAFVEDRKAMRAGGTGLRTPLPEAVATLQVFLAQLERQFATGEHIFLFGEQPTIADFSVYHALWFIRRATAVAGILDAHPEVVAWMHRMAGFGHAQAQPMTPAEALAIARAATPRALTDAGAGADFDARYGLPKGTRVTVAATDYAVDPVEGDLVVSTRDAVGVLREDPRVGQVVVHFPRVGYAVRKVE 319
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4KF9)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4KF9)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4KF9)

(-) Gene Ontology  (0, 0)

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