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(-) Description

Title :  CRYSTAL STRUCTURE OF THE MITOCHONDRIAL PEROXIREDOXIN FROM LEISHMANIA BRAZILIENSIS IN THE DIMERIC FORM
 
Authors :  T. A. C. B. Souza, M. A. B. Morais, P. O. Giuseppe, M. T. Murakami
Date :  24 Apr 13  (Deposition) - 14 May 14  (Release) - 14 May 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.79
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Thioredoxin-Like, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. A. C. B. Souza, M. A. B. Morais, P. O. Giuseppe, M. T. Murakami
Crystal Structure Of The Mitochondrial Peroxiredoxin From Leishmania Braziliensis In The Dimeric Form
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PEROXIDOXIN
    Chains: A, B
    EC Number: 1.11.1.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 34-225
    Gene: LBRM_23_0050
    Organism Scientific: LEISHMANIA BRAZILIENSIS
    Organism Taxid: 5660

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4KCE)

(-) Sites  (0, 0)

(no "Site" information available for 4KCE)

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:204 -B:81

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4KCE)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4KCE)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4KCE)

(-) Exons   (0, 0)

(no "Exon" information available for 4KCE)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:168
                                                                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..........eeeeee..eeeeee.hhhh..eeeeeee....hhhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhh.hhhhh........eee...hhhhhhh...........eeeeee.....eeeeeee......hhhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4kce A  36 ATVRDPAPQFSGKAVVDGAIKEINSNDYKGKYIVLFFYPMVCPTEIIAFSDRYLEFEKLNTQVIAVSCDSEYSHLAWVNTPRKKGGLGEMKIPVLADKSMEIARDYGVLIESAGIALRGLFVIDKKGTLRHSTINDLPVGRNVDEVLRVVEAFQYADENGDAIPCGWT 207
                                    45        55        65        75|       89        99       109       119       129       139       149       159       169       179       189       199        
                                                                  75|                                                                                                                               
                                                                   80                                                                                                                               


Chain B from PDB  Type:PROTEIN  Length:163
                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeeeee..eeeeee.hhhh..eeeeee.........hhhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhh.hhhhh........eee...hhhhhhh...........eeeeee.....eeeeeee......hhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4kce B  36 ATVRDPAPQFSGKAVVDGAIKEINSNDYKGKYIVLFFYPMDFTFVCPTEIIAFSDRYLEFEKLNTQVIAVSCDSEYSHLAWVNTPRKKGGLGEMKIPVLADKSMEIARDYGVLIESAGIALRGLFVIDKKGTLRHSTINDLPVGRNVDEVLRVVEAFQYADEN 198
                                    45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4KCE)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4KCE)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4KCE)

(-) Gene Ontology  (6, 6)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A4HCL7_LEIBR | A4HCL7: 4kb3

(-) Related Entries Specified in the PDB File

4kb3