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(-) Description

Title :  X-RAY STRUCTURE URIDINE PHOSPHORYLASE FROM VIBRIO CHOLERAE IN COMPLEX WITH 6-METHYLURACIL AT 1.17 A RESOLUTION
 
Authors :  I. I. Prokofev, A. A. Lashkov, A. G. Gabdoulkhakov, C. Betzel, A. M. Mikh
Date :  16 Apr 13  (Deposition) - 07 May 14  (Release) - 14 May 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.17
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Rossmann Fold, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  I. I. Prokofev, A. A. Lashkov, A. G. Gabdoulkhakov, M. V. Dontsova, T. A. Seregina, A. S. Mironov, C. Betzel, A. M. Mikhailov
Crystallization And Preliminary X-Ray Study Of Vibrio Cholerae Uridine Phosphorylase In Complex With 6-Methyluracil
Acta Crystallogr. , Sect. F V. 70 60 2014
PubMed: search  |  Reference-DOI: 10.1107/S2053230X13031877

(-) Compounds

Molecule 1 - URIDINE PHOSPHORYLASE
    Chains: A, B, C, D, E, F
    EC Number: 2.4.2.3
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMZ21
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: UDP
    Organism Scientific: VIBRIO CHOLERAE
    Organism Taxid: 666

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (8, 54)

Asymmetric/Biological Unit (8, 54)
No.NameCountTypeFull Name
16MU6Ligand/Ion6-METHYLPYRIMIDINE-2,4-DIOL
2CL12Ligand/IonCHLORIDE ION
3EDO4Ligand/Ion1,2-ETHANEDIOL
4EOH7Ligand/IonETHANOL
5GOL1Ligand/IonGLYCEROL
6MG16Ligand/IonMAGNESIUM ION
7NA4Ligand/IonSODIUM ION
8TRS4Ligand/Ion2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL

(-) Sites  (54, 54)

Asymmetric Unit (54, 54)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREALA A:44 , SER A:45 , HOH A:572 , HOH A:665BINDING SITE FOR RESIDUE CL A 301
02AC2SOFTWAREGLY A:25 , ASP A:26 , HOH A:478 , HOH A:491 , HOH B:531BINDING SITE FOR RESIDUE CL A 302
03AC3SOFTWARETHR A:93 , GLY A:95 , PHE A:161 , GLN A:165 , ARG A:167 , GLU A:195 , MET A:196 , ILE A:219 , HOH A:463 , HOH A:512 , HOH A:530 , HOH A:562BINDING SITE FOR RESIDUE 6MU A 303
04AC4SOFTWAREGLN A:180 , HOH A:496 , HOH A:499 , HOH A:535 , HOH A:543 , HOH A:600BINDING SITE FOR RESIDUE MG A 304
05AC5SOFTWAREHOH A:457 , HOH A:461 , HOH A:474 , HOH A:493 , HOH A:519 , HOH A:546BINDING SITE FOR RESIDUE MG A 305
06AC6SOFTWAREGLU A:48 , ILE A:68 , SER A:72 , GLU B:48 , ILE B:68 , SER B:72BINDING SITE FOR RESIDUE NA A 306
07AC7SOFTWAREMET A:125 , GLU A:126 , HOH A:487 , MET F:125BINDING SITE FOR RESIDUE EDO A 307
08AC8SOFTWAREARG A:178 , HOH A:584 , HOH A:611 , LEU B:120 , HOH B:431 , HOH B:435BINDING SITE FOR RESIDUE EOH A 308
09AC9SOFTWAREPHE A:133 , HOH A:519 , HOH A:602 , THR F:110 , HOH F:440BINDING SITE FOR RESIDUE CL A 309
10BC1SOFTWAREGLY B:25 , ASP B:26 , HOH B:543 , HOH B:646 , HOH B:733BINDING SITE FOR RESIDUE CL B 301
11BC2SOFTWAREASN B:221 , HOH B:593BINDING SITE FOR RESIDUE CL B 302
12BC3SOFTWARETHR B:93 , GLY B:95 , PHE B:161 , GLN B:165 , ARG B:167 , GLU B:195 , MET B:196 , ILE B:219 , ILE B:220 , TRS B:308 , HOH B:417BINDING SITE FOR RESIDUE 6MU B 303
13BC4SOFTWAREGLN B:180 , HOH B:471 , HOH B:500 , HOH B:510 , HOH B:563 , HOH B:598BINDING SITE FOR RESIDUE MG B 304
14BC5SOFTWAREHOH B:444 , HOH B:446 , HOH B:506 , HOH B:518 , HOH B:727BINDING SITE FOR RESIDUE MG B 305
15BC6SOFTWAREHOH B:456 , HOH B:463BINDING SITE FOR RESIDUE MG B 306
16BC7SOFTWAREARG B:167 , THR B:170 , ARG B:174 , HOH B:404BINDING SITE FOR RESIDUE NA B 307
17BC8SOFTWAREHIS A:7 , ARG A:47 , ILE B:68 , THR B:93 , GLU B:195 , MET B:196 , GLU B:197 , 6MU B:303 , HOH B:402 , HOH B:521 , HOH B:576 , HOH B:698BINDING SITE FOR RESIDUE TRS B 308
18BC9SOFTWAREPRO B:99 , VAL B:101 , ASN B:102 , VAL B:103 , ASN B:221 , HOH B:593 , HOH B:622 , HOH B:629BINDING SITE FOR RESIDUE EDO B 309
19CC1SOFTWARELEU A:120 , HOH A:431 , ARG B:178 , HOH B:428 , HOH B:618 , HOH C:647BINDING SITE FOR RESIDUE EOH B 310
20CC2SOFTWAREGLY C:25 , ASP C:26 , HOH C:786BINDING SITE FOR RESIDUE CL C 301
21CC3SOFTWAREASN C:221 , HOH C:594BINDING SITE FOR RESIDUE CL C 302
22CC4SOFTWARETHR B:110 , HOH B:493 , PHE C:133 , HOH C:446 , HOH C:682BINDING SITE FOR RESIDUE CL C 303
23CC5SOFTWARETHR C:93 , GLY C:95 , PHE C:161 , GLN C:165 , ARG C:167 , GLU C:195 , MET C:196 , ILE C:220 , TRS C:309 , HOH C:403BINDING SITE FOR RESIDUE 6MU C 304
24CC6SOFTWAREGLN C:180 , HOH C:525 , HOH C:579 , HOH C:591 , HOH C:601 , HOH E:543BINDING SITE FOR RESIDUE MG C 305
25CC7SOFTWAREHOH C:603 , HOH C:624 , HOH C:692 , HOH C:754 , HOH C:758 , HOH C:789BINDING SITE FOR RESIDUE MG C 306
26CC8SOFTWAREHOH B:493 , HOH B:527 , HOH C:439 , HOH C:444 , HOH C:450 , HOH C:533BINDING SITE FOR RESIDUE MG C 307
27CC9SOFTWAREGLU C:48 , ILE C:68 , SER C:72 , GLU D:48 , ILE D:68 , SER D:72BINDING SITE FOR RESIDUE NA C 308
28DC1SOFTWAREILE C:68 , THR C:93 , GLU C:195 , MET C:196 , GLU C:197 , 6MU C:304 , HOH C:472 , HOH C:520 , HOH C:731 , HIS D:7 , ARG D:47BINDING SITE FOR RESIDUE TRS C 309
29DC2SOFTWAREVAL C:101 , ASN C:102 , VAL C:103 , ASN C:221 , HOH C:594 , HOH C:649 , HOH C:705BINDING SITE FOR RESIDUE EOH C 310
30DC3SOFTWAREHOH B:631 , ARG C:178 , HOH C:630 , HOH C:635 , LEU D:120 , HOH D:418 , HOH D:427BINDING SITE FOR RESIDUE EOH C 311
31DC4SOFTWAREARG C:47 , HOH C:477 , HOH C:704 , GLY D:25 , ILE D:68 , ARG D:90 , MET D:196 , GLU D:197 , HOH D:670 , HOH D:821BINDING SITE FOR RESIDUE GOL C 312
32DC5SOFTWAREHOH C:523 , GLY D:25 , ASP D:26 , HOH D:559BINDING SITE FOR RESIDUE CL D 301
33DC6SOFTWARETHR D:93 , GLY D:95 , GLN D:165 , ARG D:167 , GLU D:195 , MET D:196 , HOH D:445 , HOH D:810BINDING SITE FOR RESIDUE 6MU D 302
34DC7SOFTWAREGLN D:180 , HOH D:464 , HOH D:498 , HOH D:499 , HOH D:544 , HOH D:631BINDING SITE FOR RESIDUE MG D 303
35DC8SOFTWAREHIS D:46 , HOH D:518 , HOH D:652 , HOH D:797 , HOH D:814BINDING SITE FOR RESIDUE MG D 304
36DC9SOFTWAREHOH D:439 , HOH D:442 , HOH D:480 , HOH D:755 , HOH D:757BINDING SITE FOR RESIDUE MG D 305
37EC1SOFTWAREMET D:125 , GLU D:126 , HOH D:534 , MET E:125 , GLU E:126BINDING SITE FOR RESIDUE EDO D 306
38EC2SOFTWARELEU C:120 , HOH C:427 , HOH C:428 , ARG D:178 , HOH D:560 , HOH D:562 , HOH D:778BINDING SITE FOR RESIDUE EOH D 307
39EC3SOFTWAREGLY E:25 , ASP E:26 , ARG E:29 , HOH F:601BINDING SITE FOR RESIDUE CL E 301
40EC4SOFTWARETHR E:93 , GLY E:95 , PHE E:161 , GLN E:165 , ARG E:167 , PHE E:194 , GLU E:195 , MET E:196 , ILE E:220 , TRS E:306 , HOH E:420BINDING SITE FOR RESIDUE 6MU E 302
41EC5SOFTWAREHOH A:795 , GLN E:180 , HOH E:654 , HOH E:681 , HOH E:728BINDING SITE FOR RESIDUE MG E 303
42EC6SOFTWAREGLU E:48 , ILE E:68 , SER E:72 , GLU F:48 , ILE F:68 , SER F:72BINDING SITE FOR RESIDUE NA E 304
43EC7SOFTWAREHIS E:7 , ARG E:47 , HOH E:486 , HOH E:526 , HOH E:799 , ILE F:68 , THR F:93 , GLU F:197 , 6MU F:303 , HOH F:831BINDING SITE FOR RESIDUE TRS E 305
44EC8SOFTWAREILE E:68 , THR E:93 , GLU E:195 , MET E:196 , GLU E:197 , 6MU E:302 , HOH E:457 , HOH E:520 , HOH E:702 , HOH E:724 , HIS F:7 , ARG F:47BINDING SITE FOR RESIDUE TRS E 306
45EC9SOFTWAREHOH D:595 , ARG E:178 , HOH E:602 , LEU F:120 , HOH F:423 , HOH F:430BINDING SITE FOR RESIDUE EOH E 307
46FC1SOFTWAREHOH E:461 , HOH E:491 , HOH E:518 , HOH E:788 , HOH E:821BINDING SITE FOR RESIDUE MG E 308
47FC2SOFTWAREGLY F:25 , ASP F:26 , ARG F:29 , HOH F:805BINDING SITE FOR RESIDUE CL F 301
48FC3SOFTWAREARG F:29 , ALA F:238 , ILE F:241 , HOH F:447 , HOH F:728BINDING SITE FOR RESIDUE CL F 302
49FC4SOFTWARETRS E:305 , THR F:93 , GLY F:95 , PHE F:161 , GLN F:165 , ARG F:167 , PHE F:194 , GLU F:195 , MET F:196 , ILE F:220 , HOH F:416BINDING SITE FOR RESIDUE 6MU F 303
50FC5SOFTWAREGLN F:180 , HOH F:594 , HOH F:605 , HOH F:607 , HOH F:676 , HOH F:827BINDING SITE FOR RESIDUE MG F 304
51FC6SOFTWAREASN F:102 , MG F:306 , HOH F:468 , HOH F:501BINDING SITE FOR RESIDUE MG F 305
52FC7SOFTWAREMG F:305 , HOH F:468 , HOH F:501 , HOH F:558BINDING SITE FOR RESIDUE MG F 306
53FC8SOFTWARELYS E:3 , GLN E:82 , ASP F:169 , THR F:170 , PHE F:171 , HOH F:523BINDING SITE FOR RESIDUE EDO F 307
54FC9SOFTWARELEU E:120 , HOH E:428 , HOH E:437 , ARG F:178 , HOH F:571 , HOH F:622BINDING SITE FOR RESIDUE EOH F 308

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4K6O)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4K6O)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4K6O)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4K6O)

(-) Exons   (0, 0)

(no "Exon" information available for 4K6O)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:252
                                                                                                                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..........hhhhh...eeee....hhhhhhhh..eeeeeeeee..eeeeeeee..eeeeee....hhhhhhhhhhhhhhh...eeeeeeeeee.........eeeeeeeeee.hhhhhh.........hhhhhhhhhhhhhhh...eeeeeeeee...hhhhh.........hhhhhhhhhhhhhh...eee.hhhhhhhhhhh...eeeeeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4k6o A   2 TKTVFHLGVTEADLNGATLAIIPGDPARVQKIAELMDNPVFLASHREYTVYRAELDGQSVVVCSTGIGGPSTSIAVEELAQLGVRTFLRVGTTGAIQPHVNVGDMIVTTGSVRLDGASLHFAPMEFPAVPDFDVATAMKAAAQESGATVHMGVTASSDTFYPGQERYDTFTGRVVRRFQGSMKEWQDMGVLNFEMESATLLTMCASSGLKAGCVAGVIINRTQKEIPDHATLKETEARSIKVVVEAARKMLK 253
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251  


Chain B from PDB  Type:PROTEIN  Length:248
                                                                                                                                                                                                                                                                                        
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhh...eeee....hhhhhhhh..eeeeeeeee..eeeeeeee..eeeeee....hhhhhhhhhhhhhhh...eeeeeeeeee.........eeeeeeeeee.hhhhhh.........hhhhhhhhhhhhhhh...eeeeeeeee...hhhhh.........hhhhhhhhhhhhhh...eee.hhhhhhhhhhh...eeeeeeeeeee........hhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4k6o B   2 TKTVFHLGVTEADLNGATLAIIPGDPARVQKIAELMDNPVFLASHREYTVYRAELDGQSVVVCSTGIGGPSTSIAVEELAQLGVRTFLRVGTTGAIQPHVNVGDMIVTTGSVRLDGASLHFAPMEFPAVPDFDVATAMKAAAQESGATVHMGVTASSDTFYPGQERYDTFTGRVVRRFQGSMKEWQDMGVLNFEMESATLLTMCASSGLKAGCVAGVIINRTQKEIPLKETEARSIKVVVEAARKMLK 253
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221      |235       245        
                                                                                                                                                                                                                                                            228|                    
                                                                                                                                                                                                                                                             233                    


Chain C from PDB  Type:PROTEIN  Length:247
                                                                                                                                                                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhh...eeee..hhhhhhhhhh..eeeeeeeee..eeeeeeee..eeeeee....hhhhhhhhhhhhhhh...eeeeeeeeee.........eeeeeeeeee.hhhhhh.........hhhhhhhhhhhhhhh...eeeeeeeee...hhhhh.........hhhhhhhhhhhhhh...eee.hhhhhhhhhhh...eeeeeeeeeee.........hhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4k6o C   3 KTVFHLGVTEADLNGATLAIIPGDPARVQKIAELMDNPVFLASHREYTVYRAELDGQSVVVCSTGIGGPSTSIAVEELAQLGVRTFLRVGTTGAIQPHVNVGDMIVTTGSVRLDGASLHFAPMEFPAVPDFDVATAMKAAAQESGATVHMGVTASSDTFYPGQERYDTFTGRVVRRFQGSMKEWQDMGVLNFEMESATLLTMCASSGLKAGCVAGVIINRTQKEIPDKETEARSIKVVVEAARKMLK 253
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222      |236       246       
                                                                                                                                                                                                                                                            229|                   
                                                                                                                                                                                                                                                             234                   


Chain D from PDB  Type:PROTEIN  Length:252
                                                                                                                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..........hhhhh...eeee....hhhhhhhh..eeeeeeeee..eeeeeeee..eeeeee....hhhhhhhhhhhhhhh...eeeeeeee...........eeeeeeeeee.hhhhhh.........hhhhhhhhhhhhhhh...eeeeeeeee...hhhhh.........hhhhhhhhhhhhhh...eee.hhhhhhhhhhh...eeeeeeee..........hhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4k6o D   2 TKTVFHLGVTEADLNGATLAIIPGDPARVQKIAELMDNPVFLASHREYTVYRAELDGQSVVVCSTGIGGPSTSIAVEELAQLGVRTFLRVGTTGAIQPHVNVGDMIVTTGSVRLDGASLHFAPMEFPAVPDFDVATAMKAAAQESGATVHMGVTASSDTFYPGQERYDTFTGRVVRRFQGSMKEWQDMGVLNFEMESATLLTMCASSGLKAGCVAGVIINRTQKEIPDHATLKETEARSIKVVVEAARKMLK 253
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251  


Chain E from PDB  Type:PROTEIN  Length:251
                                                                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhh...eeee....hhhhhhhh..eeeeeeeee..eeeeeeee..eeeeee....hhhhhhhhhhhhhhh...eeeee..eee.........eeeeeeeeee.hhhhhh.........hhhhhhhhhhhhhhh...eeeeeeeee...hhhhh.........hhhhhhhhhhhhhh...eee.hhhhhhhhhhh...eeeeeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4k6o E   3 KTVFHLGVTEADLNGATLAIIPGDPARVQKIAELMDNPVFLASHREYTVYRAELDGQSVVVCSTGIGGPSTSIAVEELAQLGVRTFLRVGTTGAIQPHVNVGDMIVTTGSVRLDGASLHFAPMEFPAVPDFDVATAMKAAAQESGATVHMGVTASSDTFYPGQERYDTFTGRVVRRFQGSMKEWQDMGVLNFEMESATLLTMCASSGLKAGCVAGVIINRTQKEIPDHATLKETEARSIKVVVEAARKMLK 253
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252 


Chain F from PDB  Type:PROTEIN  Length:252
                                                                                                                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..........hhhhh...eeee....hhhhhhhh..eeeeeeeee..eeeeeeee..eeeeee....hhhhhhhhhhhhhhh...eeeee..eee.........eeeeeeeeee.hhhhhh.........hhhhhhhhhhhhhhh...eeeeeeeee...hhhhh.........hhhhhhhhhhhhhh...eee.hhhhhhhhhhh...eeeeeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4k6o F   2 TKTVFHLGVTEADLNGATLAIIPGDPARVQKIAELMDNPVFLASHREYTVYRAELDGQSVVVCSTGIGGPSTSIAVEELAQLGVRTFLRVGTTGAIQPHVNVGDMIVTTGSVRLDGASLHFAPMEFPAVPDFDVATAMKAAAQESGATVHMGVTASSDTFYPGQERYDTFTGRVVRRFQGSMKEWQDMGVLNFEMESATLLTMCASSGLKAGCVAGVIINRTQKEIPDHATLKETEARSIKVVVEAARKMLK 253
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4K6O)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4K6O)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4K6O)

(-) Gene Ontology  (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9K4U1_VIBCL | Q9K4U1: 4g8j 4h1t 4ip0 4lzw 4oeh 4u2k 5c80 5efo 5epu

(-) Related Entries Specified in the PDB File

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