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(-) Description

Title :  CRYSTAL STRUCTURE OF A SUBTYPE H18 HEMAGGLUTININ HOMOLOGUE FROM A/FLAT-FACED BAT/PERU/033/2010 (H18N11)
 
Authors :  X. Zhu, I. A. Wilson
Date :  11 Apr 13  (Deposition) - 23 Oct 13  (Release) - 20 Nov 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.15
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Influenza Virus, Hemagglutinin Homologue, H18, Ectodomain, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Tong, X. Zhu, Y. Li, M. Shi, J. Zhang, M. Bourgeois, H. Yang, X. Chen, S. Recuenco, J. Gomez, L. M. Chen, A. Johnson, Y. Tao, C. Dreyfus, W. Yu, R. Mcbride, P. J. Carney, A. T. Gilbert, J. Chang, Z. Guo, C. T. Davis, J. C. Paulson, J. Stevens, C. E. Rupprecht, E. C. Holmes, I. A. Wilson, R. O. Donis
New World Bats Harbor Diverse Influenza A Viruses.
Plos Pathog. V. 9 03657 2013
PubMed-ID: 24130481  |  Reference-DOI: 10.1371/JOURNAL.PPAT.1003657

(-) Compounds

Molecule 1 - HEMAGGLUTININ HA1
    Chains: A, C, E
    Engineered: YES
    Expression System: TRICHOPLUSIA NI
    Expression System Common: CABBAGE LOOPER
    Expression System Plasmid: PFASTBACHT-A
    Expression System Strain: HI5
    Expression System Taxid: 7111
    Expression System Vector Type: BACULOVIRUS
    Organism Scientific: INFLUENZA A VIRUS
    Organism Taxid: 11320
    Strain: A/FLAT-FACED BAT/PERU/033/2010(H18N11)
 
Molecule 2 - HEMAGGLUTININ HA2
    Chains: B, D, F
    Engineered: YES
    Expression System: TRICHOPLUSIA NI
    Expression System Common: CABBAGE LOOPER
    Expression System Plasmid: PFASTBACHT-A
    Expression System Strain: HI5
    Expression System Taxid: 7111
    Expression System Vector Type: BACULOVIRUS
    Organism Scientific: INFLUENZA A VIRUS
    Organism Taxid: 11320
    Strain: A/FLAT-FACED BAT/PERU/033/2010(H18N11)

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 61)

Asymmetric/Biological Unit (6, 61)
No.NameCountTypeFull Name
1BMA5Ligand/IonBETA-D-MANNOSE
2FUC4Ligand/IonALPHA-L-FUCOSE
3FUL8Ligand/IonBETA-L-FUCOSE
4MAN6Ligand/IonALPHA-D-MANNOSE
5NAG26Ligand/IonN-ACETYL-D-GLUCOSAMINE
6P4G12Ligand/Ion1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE

(-) Sites  (61, 61)

Asymmetric Unit (61, 61)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:167 , ASN A:242 , FUC A:502 , FUL A:503 , NAG A:504 , HOH A:626 , MAN C:506BINDING SITE FOR RESIDUE NAG A 501
02AC2SOFTWAREHIS A:167 , NAG A:501 , HOH A:707 , SER E:137BINDING SITE FOR RESIDUE FUC A 502
03AC3SOFTWARENAG A:501 , NAG A:504 , FUL C:503BINDING SITE FOR RESIDUE FUL A 503
04AC4SOFTWARENAG A:501 , FUL A:503 , BMA A:505 , MAN A:507 , ASN E:224BINDING SITE FOR RESIDUE NAG A 504
05AC5SOFTWARENAG A:504 , MAN A:506 , MAN A:507 , ASN E:224BINDING SITE FOR RESIDUE BMA A 505
06AC6SOFTWAREBMA A:505 , GLY C:207 , GLU C:208 , NAG C:501 , FUL C:503BINDING SITE FOR RESIDUE MAN A 506
07AC7SOFTWARENAG A:504 , BMA A:505 , HOH A:721 , HOH A:731 , GLU E:94 , ASN E:95 , GLY E:96 , ILE E:96A , ALA E:138 , ASN E:224 , HOH E:607BINDING SITE FOR RESIDUE MAN A 507
08AC8SOFTWAREASN A:21 , FUC A:509 , FUL A:510 , NAG A:511BINDING SITE FOR RESIDUE NAG A 508
09AC9SOFTWARENAG A:508 , NAG A:511BINDING SITE FOR RESIDUE FUC A 509
10BC1SOFTWARENAG A:508 , NAG A:511 , NAG B:501BINDING SITE FOR RESIDUE FUL A 510
11BC2SOFTWARENAG A:508 , FUC A:509 , FUL A:510 , BMA A:512 , MAN A:514 , LYS B:143BINDING SITE FOR RESIDUE NAG A 511
12BC3SOFTWARENAG A:511 , MAN A:513 , MAN A:514 , GLU B:165 , HOH B:649BINDING SITE FOR RESIDUE BMA A 512
13BC4SOFTWAREBMA A:512 , GLU B:161BINDING SITE FOR RESIDUE MAN A 513
14BC5SOFTWAREASP A:142 , NAG A:511 , BMA A:512BINDING SITE FOR RESIDUE MAN A 514
15BC6SOFTWAREASN A:264 , FUL A:516 , FUL A:517 , NAG A:518 , PHE B:63BINDING SITE FOR RESIDUE NAG A 515
16BC7SOFTWAREASN A:264 , NAG A:515 , HOH A:728 , GLN B:62 , PHE B:63BINDING SITE FOR RESIDUE FUL A 516
17BC8SOFTWARELYS A:54 , NAG A:515 , NAG A:518BINDING SITE FOR RESIDUE FUL A 517
18BC9SOFTWARENAG A:515 , FUL A:517 , ASN B:60 , GLN B:62 , LYS C:310BINDING SITE FOR RESIDUE NAG A 518
19CC1SOFTWARECYS A:277 , ASP A:278 , ASN A:289 , NAG A:520BINDING SITE FOR RESIDUE NAG A 519
20CC2SOFTWARENAG A:519BINDING SITE FOR RESIDUE NAG A 520
21CC3SOFTWAREASN A:211 , TRP A:234 , GLY A:235 , VAL A:236 , HOH A:629 , HOH A:678BINDING SITE FOR RESIDUE P4G A 521
22CC4SOFTWAREMAN A:506 , HIS C:167 , ASN C:240 , ASN C:242 , FUC C:502 , FUL C:503 , NAG C:504 , HOH C:617 , HOH C:712BINDING SITE FOR RESIDUE NAG C 501
23CC5SOFTWARESER C:137 , HIS C:167 , GLY C:225 , NAG C:501BINDING SITE FOR RESIDUE FUC C 502
24CC6SOFTWAREFUL A:503 , MAN A:506 , NAG C:501 , NAG C:504 , HOH C:617BINDING SITE FOR RESIDUE FUL C 503
25CC7SOFTWAREASN C:224 , NAG C:501 , FUL C:503 , BMA C:505 , MAN C:507 , HOH C:617 , HOH C:774BINDING SITE FOR RESIDUE NAG C 504
26CC8SOFTWAREGLU A:208 , LEU C:223 , ASN C:224 , NAG C:504 , MAN C:506 , MAN C:507BINDING SITE FOR RESIDUE BMA C 505
27CC9SOFTWAREGLY A:207 , GLU A:208 , GLN A:241 , NAG A:501 , BMA C:505BINDING SITE FOR RESIDUE MAN C 506
28DC1SOFTWAREGLU C:94 , GLY C:96 , ILE C:96A , CYS C:97 , ASN C:224 , NAG C:504 , BMA C:505 , HOH C:699BINDING SITE FOR RESIDUE MAN C 507
29DC2SOFTWAREASN C:264 , FUL C:509 , NAG C:510 , HOH C:782 , PHE D:63BINDING SITE FOR RESIDUE NAG C 508
30DC3SOFTWAREASN C:264 , NAG C:508 , HOH C:740 , GLN D:62 , PHE D:63 , HOH F:680BINDING SITE FOR RESIDUE FUL C 509
31DC4SOFTWARENAG C:508 , BMA C:511 , ASN D:60BINDING SITE FOR RESIDUE NAG C 510
32DC5SOFTWARENAG C:510 , BMA C:512 , ASN D:60BINDING SITE FOR RESIDUE BMA C 511
33DC6SOFTWAREBMA C:511 , P4G E:510BINDING SITE FOR RESIDUE BMA C 512
34DC7SOFTWAREASP C:278 , ASN C:289 , HOH C:661BINDING SITE FOR RESIDUE NAG C 513
35DC8SOFTWARETRP D:21BINDING SITE FOR RESIDUE P4G C 514
36DC9SOFTWAREASN C:211 , TRP C:234 , VAL C:236 , HOH C:612 , HOH C:619BINDING SITE FOR RESIDUE P4G C 515
37EC1SOFTWAREASN C:48 , GLU C:272BINDING SITE FOR RESIDUE P4G C 516
38EC2SOFTWAREASN E:242 , NAG E:502BINDING SITE FOR RESIDUE NAG E 501
39EC3SOFTWARENAG E:501BINDING SITE FOR RESIDUE NAG E 502
40EC4SOFTWAREASN E:21BINDING SITE FOR RESIDUE NAG E 503
41EC5SOFTWAREASN E:264 , FUC E:505 , FUL E:506 , NAG E:507 , HOH E:713 , PHE F:63BINDING SITE FOR RESIDUE NAG E 504
42EC6SOFTWARETHR E:263A , ASN E:264 , NAG E:504 , NAG E:507 , GLN F:62 , PHE F:63BINDING SITE FOR RESIDUE FUC E 505
43EC7SOFTWARENAG E:504 , NAG E:507BINDING SITE FOR RESIDUE FUL E 506
44EC8SOFTWARELYS E:54 , ASP E:304 , NAG E:504 , FUC E:505 , FUL E:506 , HOH E:690 , HOH E:697BINDING SITE FOR RESIDUE NAG E 507
45EC9SOFTWAREASP E:278 , ASN E:289 , NAG E:509 , HOH E:650BINDING SITE FOR RESIDUE NAG E 508
46FC1SOFTWARENAG E:508BINDING SITE FOR RESIDUE NAG E 509
47FC2SOFTWAREBMA C:512 , HIS E:47 , GLN E:312BINDING SITE FOR RESIDUE P4G E 510
48FC3SOFTWAREHIS E:40 , TRP F:21BINDING SITE FOR RESIDUE P4G E 511
49FC4SOFTWAREFUL A:510 , ASN B:145 , GLU B:161 , TYR B:162 , FUL B:502 , NAG B:503 , HOH B:620BINDING SITE FOR RESIDUE NAG B 501
50FC5SOFTWARENAG B:501 , NAG B:503BINDING SITE FOR RESIDUE FUL B 502
51FC6SOFTWAREGLU B:161 , TYR B:162 , NAG B:501 , FUL B:502BINDING SITE FOR RESIDUE NAG B 503
52FC7SOFTWARETHR B:49BINDING SITE FOR RESIDUE P4G B 504
53FC8SOFTWAREILE B:18 , GLY B:20 , TRP B:21 , HOH B:663BINDING SITE FOR RESIDUE P4G B 505
54FC9SOFTWAREASN B:116 , ASN B:117 , GLN B:120 , ASN F:116BINDING SITE FOR RESIDUE P4G B 506
55GC1SOFTWAREASP D:19 , ASN D:145 , THR D:147 , TYR D:162 , NAG D:502 , HOH D:665BINDING SITE FOR RESIDUE NAG D 501
56GC2SOFTWAREGLU D:161 , NAG D:501BINDING SITE FOR RESIDUE NAG D 502
57GC3SOFTWAREHIS C:18 , ILE D:18 , TRP D:21 , THR D:41BINDING SITE FOR RESIDUE P4G D 503
58GC4SOFTWAREASN F:145 , TYR F:162 , NAG F:502BINDING SITE FOR RESIDUE NAG F 501
59GC5SOFTWAREGLU F:161 , NAG F:501BINDING SITE FOR RESIDUE NAG F 502
60GC6SOFTWAREILE F:18 , GLY F:20 , TRP F:21 , GLN F:42 , VAL F:45BINDING SITE FOR RESIDUE P4G F 503
61GC7SOFTWAREASP B:109 , ALA F:113 , ASN F:114 , HOH F:682BINDING SITE FOR RESIDUE P4G F 504

(-) SS Bonds  (18, 18)

Asymmetric/Biological Unit
No.Residues
1A:14 -B:137
2A:52 -A:277
3A:64 -A:76
4A:97 -A:139
5A:281 -A:305
6B:144 -B:148
7C:14 -D:137
8C:52 -C:277
9C:64 -C:76
10C:97 -C:139
11C:281 -C:305
12D:144 -D:148
13E:14 -F:137
14E:52 -E:277
15E:64 -E:76
16E:97 -E:139
17E:281 -E:305
18F:144 -F:148

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Thr A:142A-Asn A:143

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4K3X)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4K3X)

(-) Exons   (0, 0)

(no "Exon" information available for 4K3X)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:322
                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains d4k3xa_ A: automated matches                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.......ee.......ee...eee.ee......eeee.....ee....hhhhhhhh..........eee..eee...............hhhhhhhhhh.eeeeeeee..hhhhh........eeeee.....ee.....ee........eeeeee......eeeeeeeee..hhhhhhhhhh.....eeeee..eeeee...............eeeeeeeee....eeeeee...eee..eeeeeee......eee....eeeeee.eee..ee......ee......ee...ee......eee......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4k3x A   11 DQICIGYHSNNSTQTVNTLLESNVPVTSSHSILEKEHNGLLCKLKGKAPLDLIDCSLPAWLMGNPKCDELLTASEWAYIKEDPEPENGICFPGDFDSLEDLILLVSNTDHFRKEKIIDMTRFSDVTTNNVDSACPYDTNGASFYRNLNWVQQNKGKQLIFHYQNSENNPLLIIWGVHQTSNAAEQNTYYGSQTGSTTITIGEETNTYPLVISESSILNGHSDRINYFWGVVNPNQNFSIVSTGNFIWPEYGYFFQKTTNISGIIKSSEKISDCDTICQTKIGAINSTLPFQNIHQNAIGDCPKYVKAQELVLATGLRNNPIK  326
                                    20        30        40        50   |    59        69        79  |     88        97       107       117      125B       135       144       154 ||    166       176       186       196       206       216       226       236       246       256      264A       274       284       294       304       314       324  
                                                                     53A                          81A             96A                          125A|              142A           156|                                                                                                     263A |                                                              
                                                                                                                                                125B                              159                                                                                                       264A                                                              


Chain B from PDB  Type:PROTEIN  Length:170
                                                                                                                                                                                                           
               SCOP domains d4k3xb_ B: automated matches                                                                                                                                               SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhh.........eeeeeee..eeeeeehhhhhhhhhhhhhhhhhhhhhh...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eee....eeee....hhhhhhhhhh...hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4k3x B    6 IAGFIEGGWQGLIDGWYGYHHQNSEGSGYAADKEATQKAVDAITTKVNNIIDKMNTQFESTAKEFNKIEMRIKHLSDRVDDGFLDVWSYNAELLVLLENERTLDFHDANVNNLYQKVKVQLKDNAIDMGNGCFKILHKCNNTCMDDIKNGTYNYYEYRKESHLEKQKIDS  175
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175


Chain C from PDB  Type:PROTEIN  Length:322
                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains d4k3xc_ C: automated matches                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.......ee.......ee...eee.ee......eeee.....ee....hhhhhhhh..........eee..eee...............hhhhhhhhhh.eeeeeeee..hhhhh........eeeeeee..eee.....eee.......eeeeee......eeeeeeeee..hhhhhhhhhh.....eeeee..eeeee...............eeeeeeeee....eeeeee...eee..eeeeeee......eee....eeeeee.eee..ee......ee......ee...ee......eee......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4k3x C   11 DQICIGYHSNNSTQTVNTLLESNVPVTSSHSILEKEHNGLLCKLKGKAPLDLIDCSLPAWLMGNPKCDELLTASEWAYIKEDPEPENGICFPGDFDSLEDLILLVSNTDHFRKEKIIDMTRFSDVTTNNVDSACPYDTNGASFYRNLNWVQQNKGKQLIFHYQNSENNPLLIIWGVHQTSNAAEQNTYYGSQTGSTTITIGEETNTYPLVISESSILNGHSDRINYFWGVVNPNQNFSIVSTGNFIWPEYGYFFQKTTNISGIIKSSEKISDCDTICQTKIGAINSTLPFQNIHQNAIGDCPKYVKAQELVLATGLRNNPIK  326
                                    20        30        40        50   |    59        69        79  |     88        97       107       117      125B       135       144       154 ||    166       176       186       196       206       216       226       236       246       256      264A       274       284       294       304       314       324  
                                                                     53A                          81A             96A                          125A|              142A           156|                                                                                                     263A |                                                              
                                                                                                                                                125B                              159                                                                                                       264A                                                              


Chain D from PDB  Type:PROTEIN  Length:170
                                                                                                                                                                                                           
               SCOP domains d4k3xd_ D: automated matches                                                                                                                                               SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhh.........eeeeeee..eeeeeehhhhhhhhhhhhhhhhhhhhhh...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eee....eeee....hhhhhhhhhhh......hhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4k3x D    6 IAGFIEGGWQGLIDGWYGYHHQNSEGSGYAADKEATQKAVDAITTKVNNIIDKMNTQFESTAKEFNKIEMRIKHLSDRVDDGFLDVWSYNAELLVLLENERTLDFHDANVNNLYQKVKVQLKDNAIDMGNGCFKILHKCNNTCMDDIKNGTYNYYEYRKESHLEKQKIDS  175
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175


Chain E from PDB  Type:PROTEIN  Length:322
                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains d4k3xe_ E: automated matches                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.......ee.......ee...eee.ee......eeee.....ee....hhhhhhhh..........eee..eee...............hhhhhhhhhh.eeeeeeee..hhhhh.........................ee........eeeeee......eeeeeeeee..hhhhhhhhhh.....eeeee..eeeee...............eeeeeeeee....eeeeee...eee..eeeeeee......eee....eeeeee.eee..ee......ee......ee...ee......eee......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4k3x E   11 DQICIGYHSNNSTQTVNTLLESNVPVTSSHSILEKEHNGLLCKLKGKAPLDLIDCSLPAWLMGNPKCDELLTASEWAYIKEDPEPENGICFPGDFDSLEDLILLVSNTDHFRKEKIIDMTRFSDVTTNNVDSACPYDTNGASFYRNLNWVQQNKGKQLIFHYQNSENNPLLIIWGVHQTSNAAEQNTYYGSQTGSTTITIGEETNTYPLVISESSILNGHSDRINYFWGVVNPNQNFSIVSTGNFIWPEYGYFFQKTTNISGIIKSSEKISDCDTICQTKIGAINSTLPFQNIHQNAIGDCPKYVKAQELVLATGLRNNPIK  326
                                    20        30        40        50   |    59        69        79  |     88        97       107       117      125B       135       144       154 ||    166       176       186       196       206       216       226       236       246       256      264A       274       284       294       304       314       324  
                                                                     53A                          81A             96A                          125A|              142A           156|                                                                                                     263A |                                                              
                                                                                                                                                125B                              159                                                                                                       264A                                                              


Chain F from PDB  Type:PROTEIN  Length:170
                                                                                                                                                                                                           
               SCOP domains d4k3xf_ F: automated matches                                                                                                                                               SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ................eeeeeee..eeeeeehhhhhhhhhhhhhhhhhhhhhh...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eee....eeee....hhhhhhhhhh...hhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4k3x F    6 IAGFIEGGWQGLIDGWYGYHHQNSEGSGYAADKEATQKAVDAITTKVNNIIDKMNTQFESTAKEFNKIEMRIKHLSDRVDDGFLDVWSYNAELLVLLENERTLDFHDANVNNLYQKVKVQLKDNAIDMGNGCFKILHKCNNTCMDDIKNGTYNYYEYRKESHLEKQKIDS  175
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 6)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)
(-)
Class: Coiled coil proteins (689)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4K3X)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4K3X)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 4K3X)

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