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(-) Description

Title :  CRYSTAL STRUCTURE OF THE CHIMERICAL PROTEIN CAPA1B1 IN COMPLEX WITH ADP-MG
 
Authors :  J. Gruszczyk, V. Olivares-Illana, J. Nourikyan, A. Fleurie, E. Bechet M. Aumont-Nicaise, V. Gueguen-Chaignon, S. Morera, C. Grangeasse, S
Date :  13 Mar 13  (Deposition) - 05 Feb 14  (Release) - 05 Feb 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym./Biol. Unit :  A
Keywords :  Rossmann Fold, Tyrosine Kinase, Atp-Binding, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Gruszczyk, V. Olivares-Illana, J. Nourikyan, A. Fleurie, E. Bechet, V. Gueguen-Chaignon, C. Freton, M. Aumont-Nicaise, S. Morera, C. Grangeasse, S. Nessler
Comparative Analysis Of The Tyr-Kinases Capb1 And Capb2 Fused To Their Cognate Modulators Capa1 And Capa2 From Staphylococcus Aureus
Plos One V. 8 75958 2013
PubMed-ID: 24146800  |  Reference-DOI: 10.1371/JOURNAL.PONE.0075958

(-) Compounds

Molecule 1 - C-TERMINAL FRAGMENT OF MEMBRANE PROTEIN CAPA1, PUTATIVE UNCHARACTERIZED PROTEIN CAPB1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PQE30
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: CAPA1, CAPB1
    Organism Scientific: STAPHYLOCOCCUS AUREUS
    Organism Taxid: 1280
    Other Details: CHIMERA OF MEMBRANE PROTEIN CAPA1 AND TYROSINE KINASE CAPB1

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1ADP1Ligand/IonADENOSINE-5'-DIPHOSPHATE
2MG1Ligand/IonMAGNESIUM ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREILE A:218 , GLN A:219 , LYS A:220 , PHE A:221 , GLY A:1052 , ALA A:1053 , GLY A:1054 , LYS A:1055 , SER A:1056 , THR A:1057 , ASN A:1211 , MG A:1302 , HOH A:1410 , HOH A:1417BINDING SITE FOR RESIDUE ADP A 1301
2AC2SOFTWARESER A:1056 , THR A:1084 , ADP A:1301 , HOH A:1410BINDING SITE FOR RESIDUE MG A 1302

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4JLV)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4JLV)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4JLV)

(-) Exons   (0, 0)

(no "Exon" information available for 4JLV)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:228
                                                                                                                                                                                                                                                                     
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....hhhhhhhhh...eeeeee....hhhhhh..hhhhhhhhhhhhhhhhhh....eeeeee.....hhhhhhhhhhhhhhhh...eeeee......hhhhhhh.....hhhhhhh...hhhhheee.....eeee.......hhhhhhhhhhhhhhhhhhhhhh.eeeee.......hhhhhhh....eeeeeee....hhhhhhhhhhhhhhh..eeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                4jlv A  197 DKRIKDEEDVEKELGLPVLGSIQKFTTLFVYEKPKSTISEKFRGIRSNIMFSKGEVKRLLVTSEKPGAGKSTVVSNVAITYAQAGYKTLVIDGDMRKPTQNYIFNEQNNNGLSSLIIGRTTMSEAITSTEIENLDLLTAGPVPPNPSELIGSERFKELVDLFNKRYDIIIVDTPPVNTVTDAQLYARAIKDSLLVIDNEKNDKNEVKKAKALMEKAGSNILGVILNKT 1213
                                   206       216    ||1013      1023      1033  ||  1045      1055      1065      1075      1085      1095      1105      1115      1125      1135      1145      1155      1165      1175      1185      1195      1205        
                                                  221|                       1036|                                                                                                                                                                              
                                                  1009                        1039
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4JLV)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4JLV)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4JLV)

(-) Gene Ontology  (9, 10)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A8YPQ6_STAAU | A8YPQ6: 2ved 3bfv

(-) Related Entries Specified in the PDB File

2ved CRYSTAL STRUCTURE OF THE K55M MUTANT OF THE CHIMERICAL PROTEIN CAPA1B2
3bfv CRYSTAL STRUCTURE OF THE CHIMERICAL PROTEIN CAPA1B2
4jmp CRYSTAL STRUCTURE OF THE CHIMERICAL PROTEIN CAPA2B2