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(-) Description

Title :  CRYSTAL STRUCTURE OF BOS TAURUS ARP2/3 COMPLEX BINDING WITH MUS MUSCULUS GMF
 
Authors :  B. J. Nolen, Q. Luan
Date :  22 Feb 13  (Deposition) - 17 Jul 13  (Release) - 18 Sep 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.08
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H
Keywords :  Actin Filament Polymerization And Branching, Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Q. Luan, B. J. Nolen
Structural Basis For Regulation Of Arp2/3 Complex By Gmf.
Nat. Struct. Mol. Biol. V. 20 1062 2013
PubMed-ID: 23893131  |  Reference-DOI: 10.1038/NSMB.2628

(-) Compounds

Molecule 1 - ACTIN-RELATED PROTEIN 3
    Chains: A
    Organism Common: BOVINE,COW,DOMESTIC CATTLE,DOMESTIC COW
    Organism Scientific: BOS TAURUS
    Organism Taxid: 9913
    Synonym: ACTIN-2, ACTIN-LIKE PROTEIN 3
 
Molecule 2 - ACTIN-RELATED PROTEIN 2
    Chains: B
    Organism Common: BOVINE,COW,DOMESTIC CATTLE,DOMESTIC COW
    Organism Scientific: BOS TAURUS
    Organism Taxid: 9913
    Synonym: ACTIN-LIKE PROTEIN 2
 
Molecule 3 - ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1B
    Chains: C
    Organism Common: BOVINE,COW,DOMESTIC CATTLE,DOMESTIC COW
    Organism Scientific: BOS TAURUS
    Organism Taxid: 9913
    Synonym: ARP2/3 COMPLEX 41 KDA SUBUNIT, P41-ARC
 
Molecule 4 - ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 2
    Chains: D
    Organism Common: BOVINE,COW,DOMESTIC CATTLE,DOMESTIC COW
    Organism Scientific: BOS TAURUS
    Organism Taxid: 9913
    Synonym: ARP2/3 COMPLEX 34 KDA SUBUNIT, P34-ARC
 
Molecule 5 - ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 3
    Chains: E
    Organism Common: BOVINE,COW,DOMESTIC CATTLE,DOMESTIC COW
    Organism Scientific: BOS TAURUS
    Organism Taxid: 9913
    Synonym: ARP2/3 COMPLEX 21 KDA SUBUNIT, P21-ARC
 
Molecule 6 - ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 4
    Chains: F
    Organism Common: BOVINE,COW,DOMESTIC CATTLE,DOMESTIC COW
    Organism Scientific: BOS TAURUS
    Organism Taxid: 9913
    Synonym: ARP2/3 COMPLEX 20 KDA SUBUNIT, P20-ARC
 
Molecule 7 - ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 5
    Chains: G
    Organism Common: BOVINE,COW,DOMESTIC CATTLE,DOMESTIC COW
    Organism Scientific: BOS TAURUS
    Organism Taxid: 9913
    Synonym: ARP2/3 COMPLEX 16 KDA SUBUNIT, P16-ARC
 
Molecule 8 - GLIA MATURATION FACTOR GAMMA
    Chains: H
    Organism Common: MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
    Synonym: GMF-GAMMA

 Structural Features

(-) Chains, Units

  12345678
Asymmetric/Biological Unit : ABCDEFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 6)

Asymmetric/Biological Unit (3, 6)
No.NameCountTypeFull Name
1ATP2Ligand/IonADENOSINE-5'-TRIPHOSPHATE
2CA2Ligand/IonCALCIUM ION
3PG42Ligand/IonTETRAETHYLENE GLYCOL

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREATP A:502BINDING SITE FOR RESIDUE CA A 501
2AC2SOFTWAREGLY A:13 , THR A:14 , GLY A:15 , TYR A:16 , LYS A:18 , GLY A:171 , ASP A:172 , GLY A:173 , VAL A:174 , GLY A:197 , LYS A:225 , LYS A:228 , GLU A:229 , GLY A:323 , GLY A:324 , SER A:325 , MET A:327 , PHE A:328 , CA A:501BINDING SITE FOR RESIDUE ATP A 502
3AC3SOFTWAREATP B:502BINDING SITE FOR RESIDUE CA B 501
4AC4SOFTWAREGLY B:14 , THR B:15 , GLY B:16 , PHE B:17 , LYS B:19 , GLY B:160 , ASP B:161 , GLY B:162 , GLY B:186 , ARG B:214 , LYS B:217 , GLU B:218 , GLY B:305 , GLY B:306 , SER B:307 , MET B:309 , TYR B:310 , LYS B:351 , CA B:501BINDING SITE FOR RESIDUE ATP B 502
5AC5SOFTWARELYS B:322 , PHE B:340 , ILE B:342 , VAL G:16 , TYR G:19BINDING SITE FOR RESIDUE PG4 B 503
6AC6SOFTWAREGLU A:401 , GLU A:402 , ILE A:403 , LYS F:107 , PRO F:108BINDING SITE FOR RESIDUE PG4 F 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4JD2)

(-) Cis Peptide Bonds  (12, 12)

Asymmetric/Biological Unit
No.Residues
1Arg A:156 -Gln A:157
2Ser A:354 -Gly A:355
3Gln B:4 -Gly B:5
4Arg B:6 -Lys B:7
5Glu B:380 -Lys B:381
6Lys B:381 -Gly B:382
7Val B:383 -Arg B:384
8Arg B:384 -Val B:385
9Lys C:139 -Pro C:140
10Lys D:210 -Asp D:211
11Gly E:110 -Phe E:111
12Gln E:152 -Asn E:153

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4JD2)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4JD2)

(-) Exons   (0, 0)

(no "Exon" information available for 4JD2)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:398
                                                                                                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains d4jd2a1 A:3-160 automated matches                                                                                                                 d4jd2a2 A:161-416 automated matches                                                                                                                                                                                                                          SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeee...eeeeee.......eeee..eee.....hhhhh.ee.hhhh.....eee..ee..ee.hhhhhhhhhhhhhhh....hhhhh.eeeee....hhhhhhhhhhhhhhh....eeeeeehhhhhhhhhhhhh........eeeeee....eeeeeee..ee.hhhheee..hhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh....hhhhhhhhhhhh.....eeeeee......eeeeee.hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhh.eeeehhhhh..hhhhhhhhhhhhhhhhhhhhhhhh.........ee.hhhhhhhhhhhhhhhhhhhhhhhhheehhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4jd2 A   3 GRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKEMKGVDDLDFFIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGV 416
                                    12        22        32      ||54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354||     368       378       388       398       408        
                                                               39|                                                                                                                                                                                                                                                                                                            355|                                                        
                                                                52                                                                                                                                                                                                                                                                                                             360                                                        


Chain B from PDB  Type:PROTEIN  Length:377
                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeee...eeeee........eeee..eeee........eehhhhhhh...eeee..ee..ee.hhhhhhhhhhhhhh......hhhh.eeeeee....hhhhhhhhhhhhhhh....eeeeeehhhhhhhh.....eeeeee....eeeeeee..ee.hhhheee..hhhhhhhhhhhhhhhh........hhhhhhhhhhhhh....hhhhhhhhhhhh....eeee.....eeee.hhhhhhhhhhhhhhhhh....hhhhhhhhhhhh.hhhhhhhhhh.eeeehhhhh..hhhhhhhhhhhhhhhhhh......hhhhh...ee...hhhhhhhhhhhhhhhhh.......eehhhhhh........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4jd2 B   4 QGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIREIKDLMVGDEASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388
                                    13        23        33        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       
                                                                 42|                                                                                                                                                                                                                                                                                                                                                 
                                                                  51                                                                                                                                                                                                                                                                                                                                                 


Chain C from PDB  Type:PROTEIN  Length:342
                                                                                                                                                                                                                                                                                                                                                                                      
               SCOP domains d4jd2c_ C: automated matches                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeee........eee.....eeee.....eeeeeeee..eeeeeeeee.....eeeeeee....eeeeee....eeeeeee..eeeeeee.......eeeeee.....eeeeee....eeeeeee....eeeeeee.......eeeeee.....eeeeee....eeeee.......................eeee.......eeeeee.....eeeeee...eeeeee.hhh..eeeee.....eeeeeeee..eeeeee.....eeeeee....eeeeeee..............eeeeeeee.......eeeeee...eeeeeehhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4jd2 C   1 MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGIDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESALKDLKIV 372
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       320       330       340       350       360       370  
                                                                                                                                                                                                                                                                                                                         288|                                                     
                                                                                                                                                                                                                                                                                                                          319                                                     


Chain D from PDB  Type:PROTEIN  Length:283
                                                                                                                                                                                                                                                                                                                           
               SCOP domains d4jd2d1 D:1-120 automated matches                                                                                       d4jd2d2 D:121-283 automated matches                                                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhh........eeeeee...eeeeee.hhhh..eeeeeee..hhhhhhh.hhhhhhhhhhh..ee.......eeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......eeeeee..eeeeeee....eeeeeeee..hhhhhhhhhhhhhhhhh.........eeeee..................eeeeeeeehhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4jd2 D   1 MILLEVNNRIIEETLALKFENAAAGNKPEAVEVTFADFDGVLYHISNPNGDKTKVMVSISLKFYKELQAHGADELLKRVYGSYLVNPESGYNVSLLYDLENLPASKDSIVHQAGMLKRNCFASVFEKYFQFQEEGKEGENRAVIHYRDDETMYVESKKDRVTVVFSTVFKDDDDVVIGKVFMQEFKEGRRASHTAPQVLFSHREPPLELKDTDAAVGDNIGYITFVLFPRHTNASARDNTINLIHTFRDYLHYHIKCSKAYIHTRMRAKTSDFLKVLNRARPD 283
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280   


Chain E from PDB  Type:PROTEIN  Length:170
                                                                                                                                                                                                          
               SCOP domains d4jd2e_ E: automated matches                                                                                                                                               SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............ee..ee..................hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhhhhhhhhhee....eehhhhhh....hhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4jd2 E   2 PAYHSSLMDPDTKLIGNMALLPIRSQFKGPAPREKDTDIVDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITFPIPGEPGFPLNAIYAKPNKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMNKSLS 174
                                    11        21        31   ||   42        52        62        72        82        92       103       113      |124       134       144       154       164       174
                                                            35|                                                             101|              120|                                                    
                                                             37                                                              103               122                                                    


Chain F from PDB  Type:PROTEIN  Length:166
                                                                                                                                                                                                      
               SCOP domains d4jd2f_ F: ARPC4 (20 kDa subunit)                                                                                                                                      SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhh...............hhhhhh.hhhhh...eeee.....eeeeeee..eeeeeee....hhhhhhhhhhhhhhhhhh................eeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4jd2 F   3 ATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKVLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162      


Chain G from PDB  Type:PROTEIN  Length:139
                                                                                                                                                                           
               SCOP domains d4jd2g_ G: automated matches                                                                                                                SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhh.............hhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4jd2 G   9 ARFRKVDVGEYDENKFVDEEGDGGPDEGEVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDKNGVDLLMKYIYKGFESPSDNSSAVLLQWHEKALAAGGVGSIVRVLTARKTV 151
                                    18        28| ||    42        52        62        72        82        92       102       112       122       132       142         
                                              28| ||                                                                                                                   
                                               31 ||                                                                                                                   
                                                 33|                                                                                                                   
                                                  36                                                                                                                   


Chain H from PDB  Type:PROTEIN  Length:138
                                                                                                                                                                          
               SCOP domains d4jd2h_ H: automated matches                                                                                                               SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......eehhhhhhhhhhhhh......eeeeeeee....eeeeeeeee..hhhhhhhhh.....eeeeee..ee.....ee..eeeeee.....hhhhhhhhhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4jd2 H   3 DSLVVCEVDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQNISPEELKLELPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRTTDDLTETWLKEKLAF 140
                                    12        22        32        42        52        62        72        82        92       102       112       122       132
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (8, 9)

Asymmetric/Biological Unit
(-)
Class: All alpha proteins (14657)
(-)
Class: All beta proteins (24004)
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4JD2)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4JD2)

(-) Gene Ontology  (41, 105)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Arg A:156 - Gln A:157   [ RasMol ]  
    Arg B:384 - Val B:385   [ RasMol ]  
    Arg B:6 - Lys B:7   [ RasMol ]  
    Gln B:4 - Gly B:5   [ RasMol ]  
    Gln E:152 - Asn E:153   [ RasMol ]  
    Glu B:380 - Lys B:381   [ RasMol ]  
    Gly E:110 - Phe E:111   [ RasMol ]  
    Lys B:381 - Gly B:382   [ RasMol ]  
    Lys C:139 - Pro C:140   [ RasMol ]  
    Lys D:210 - Asp D:211   [ RasMol ]  
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    Val B:383 - Arg B:384   [ RasMol ]  
 

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  4jd2
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Access by UniProt ID/Accession number
  ARC1B_BOVIN | Q58CQ2
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  ARP2_BOVIN | A7MB62
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  ARP3_BOVIN | P61157
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  ARPC2_BOVIN | Q3MHR7
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  ARPC3_BOVIN | Q3T035
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  ARPC4_BOVIN | Q148J6
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  ARPC5_BOVIN | Q3SYX9
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  GMFG_MOUSE | Q9ERL7
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ARC1B_BOVIN | Q58CQ2: 1k8k 1tyq 1u2v 2p9i 2p9k 2p9l 2p9n 2p9p 2p9s 2p9u 3dxk 3dxm 3rse 3ukr 3uku 3ule 4xei 4xf2
        ARP2_BOVIN | A7MB62: 1k8k 1tyq 1u2v 2p9i 2p9k 2p9l 2p9n 2p9p 2p9s 2p9u 3dxk 3dxm 3rse 3ukr 3uku 3ule 4xei 4xf2
        ARP3_BOVIN | P61157: 1k8k 1tyq 1u2v 2p9i 2p9k 2p9l 2p9n 2p9p 2p9s 2p9u 3dxk 3dxm 3rse 3ukr 3uku 3ule 4xei 4xf2
        ARPC2_BOVIN | Q3MHR7: 1k8k 1tyq 1u2v 2p9i 2p9k 2p9l 2p9n 2p9p 2p9s 2p9u 3dxk 3dxm 3rse 3ukr 3uku 3ule 4xei 4xf2
        ARPC3_BOVIN | Q3T035: 1k8k 1tyq 1u2v 2p9i 2p9k 2p9l 2p9n 2p9p 2p9s 2p9u 3dxk 3dxm 3rse 3ukr 3uku 3ule 4xei 4xf2
        ARPC4_BOVIN | Q148J6: 1k8k 1tyq 1u2v 2p9i 2p9k 2p9l 2p9n 2p9p 2p9s 2p9u 3dxk 3dxm 3rse 3ukr 3uku 3ule 4xei 4xf2
        ARPC5_BOVIN | Q3SYX9: 1k8k 1tyq 1u2v 2p9i 2p9k 2p9l 2p9n 2p9p 2p9s 2p9u 3dxk 3dxm 3rse 3ukr 3uku 3ule 4xei 4xf2
        GMFG_MOUSE | Q9ERL7: 1vkk 1wfs

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4JD2)