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(-) Description

Title :  STRUCTURAL AND LIGAND BINDING PROPERTIES OF THE BATEMAN DOMAIN OF HUMAN MAGNESIUM TRANSPORTERS CNNM2 AND CNNM4
 
Authors :  M. A. Corral-Rodriguez, M. Stuiver, J. A. Encinar, V. Spiwok, I. Gomez- I. Oyenarte, J. Ereno-Orbea, H. Terashima, A. Accardi, T. Diercks, D. L. A. Martinez-Cruz
Date :  28 Jan 13  (Deposition) - 05 Mar 14  (Release) - 05 Mar 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.60
Chains :  Asym./Biol. Unit :  A,C
Keywords :  Cbs Domain, Cnnm2, Magnesium Transporter, Cytosol, Metal Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. A. Corral-Rodriguez, M. Stuiver, J. A. Encinar, V. Spiwok, I. Gomez-Garcia, I. Oyenarte, J. Ereno-Orbea, H. Terashima, A. Accardi, T. Diercks, D. Muller, L. A. Martinez-Cruz
Structural And Ligand Binding Properties Of The Bateman Domain Of Human Magnesium Transporters Cnnm2 And Cnnm4
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - METAL TRANSPORTER CNNM2
    Chains: A, C
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET101D/TOPO
    Expression System Strain: BL21
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: CBS DOMAIN, UNP RESIDUES 430-584
    Gene: CNNM2
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: ANCIENT CONSERVED DOMAIN-CONTAINING PROTEIN 2, CYCLIN-M2

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 12)

Asymmetric/Biological Unit (1, 12)
No.NameCountTypeFull Name
1MSE12Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 4IY2)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4IY2)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Gly A:555 -Glu A:556
2Gly C:555 -Glu C:556

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4IY2)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4IY2)

(-) Exons   (0, 0)

(no "Exon" information available for 4IY2)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:152
                                                                                                                                                                                        
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhh...hhhhhhee.hhh..ee...eehhhhhhhhhhhh..eeeee......eeeeee.hhhh..hhhhheehhhhhhhhh....eee...hhhhhhhhhhh....eeeeeeee.......eeeeeeeeehhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4iy2 A 429 mEELNIIQGALELRTKTVEDVmTPLRDCFmITGEAILDFNTmSEImESGYTRIPVFEGERSNIVDLLFVKDLAFVDPDDCTPLKTITKFYNHPLHFVFNDTKLDAmLEEFKKGKSHLAIVQRVNNEGEGDPFYEVLGIVTLEDVIEEIIKSE 580
                            |      438       448 |     458       468 |   | 478       488       498       508       518       528     | 538       548       558       568       578  
                            |                  450-MSE 458-MSE     470-MSE                                                         534-MSE                                          
                          429-MSE                                      474-MSE                                                                                                      


Chain C from PDB  Type:PROTEIN  Length:152
                                                                                                                                                                                        
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhh...hhhhh.ee......ee...eehhhhhhhhhhhh..eeeee......eeeeee.hhhh..hhhhheehhhhhhhhh....eee...hhhhhhhhhhh....eeeeeeee.......eeeeeeeeehhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4iy2 C 429 mEELNIIQGALELRTKTVEDVmTPLRDCFmITGEAILDFNTmSEImESGYTRIPVFEGERSNIVDLLFVKDLAFVDPDDCTPLKTITKFYNHPLHFVFNDTKLDAmLEEFKKGKSHLAIVQRVNNEGEGDPFYEVLGIVTLEDVIEEIIKSE 580
                            |      438       448 |     458       468 |   | 478       488       498       508       518       528     | 538       548       558       568       578  
                          429-MSE              450-MSE 458-MSE     470-MSE                                                         534-MSE                                          
                                                                       474-MSE
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4IY2)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4IY2)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4IY2)

(-) Gene Ontology  (8, 8)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Gly A:555 - Glu A:556   [ RasMol ]  
    Gly C:555 - Glu C:556   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CNNM2_HUMAN | Q9H8M5: 4iy0 4iy4 4iys

(-) Related Entries Specified in the PDB File

4iy0 4iy3 4iy4