4IVE - JenaLib

Title :   CRYSTAL STRUCTURE OF A POLYADENYLATE-BINDING PROTEIN 3 (PABPC3) FROM HOMO SAPIENS AT 2.30 A RESOLUTION

Authors :   Joint Center For Structural Genomics (Jcsg), Partnership For Biology (Tcell)

Date :   22 Jan 13 (Deposition) - 06 Feb 13 (Release) - 06 Feb 13 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.30

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D  (1x)
Biol. Unit 2: A,B  (1x)
Biol. Unit 3: C,D  (1x)
Biol. Unit 4: A  (1x)
Biol. Unit 5: B  (1x)
Biol. Unit 6: C  (1x)
Biol. Unit 7: D  (1x)

Keywords :   Pabp Unique Domain, Pf00658 Family, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi- Biology, Rna-Binding Protein, Rna Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   Joint Center For Structural Genomics (Jcsg), Partnership For T-Cell Biology (Tcell)
Crystal Structure Of A Polyadenylate-Binding Protein 3 (Pabpc3) From Homo Sapiens At 2. 30 A Resolution
To Be Published
PubMed: search

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 18)

Asymmetric Unit (2, 18)

No.	Name	Count	Type	Full Name
1	CL	2	Ligand/Ion	CHLORIDE ION
2	MSE	16	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 1 (1, 16)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	MSE	16	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 2 (1, 8)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	MSE	8	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 3 (1, 8)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	MSE	8	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 4 (1, 4)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	MSE	4	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 5 (1, 4)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	MSE	4	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 6 (1, 4)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	MSE	4	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 7 (1, 4)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	MSE	4	Mod. Amino Acid	SELENOMETHIONINE

Sites (2, 2)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
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Chain A from PDB  Type:PROTEIN  Length:76
                                                                                                            
               SCOP domains d4ivea_ A: automated matches                                                 SCOP domains
               CATH domains ---------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhh.hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------- Transcript
                 4ive A 537 QETLTASRLASAPPQKQKQmLGERLFPLIQAmHPTLAGKITGmLLEIDNSELLYmLESPESLRSKVDEAVAVLQAH 612
                                   546       556       566 |     576  |    586    |  596       606      
                                             556-MSE     568-MSE    579-MSE     591-MSE

Chain B from PDB  Type:PROTEIN  Length:77
                                                                                                             
               SCOP domains d4iveb_ B: automated matches                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------- Transcript
                 4ive B 538 ETLTASRLASAPPQKQKQmLGERLFPLIQAmHPTLAGKITGmLLEIDNSELLYmLESPESLRSKVDEAVAVLQAHQA 614
                                   547       557       567|      577 |     587   |   597       607       
                                            556-MSE     568-MSE    579-MSE     591-MSE

Chain C from PDB  Type:PROTEIN  Length:76
                                                                                                            
               SCOP domains d4ivec_ C: automated matches                                                 SCOP domains
               CATH domains ---------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhh.hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh..hhhhhhhhh.hhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------- Transcript
                 4ive C 538 ETLTASRLASAPPQKQKQmLGERLFPLIQAmHPTLAGKITGmLLEIDNSELLYmLESPESLRSKVDEAVAVLQAHQ 613
                                   547       557       567|      577 |     587   |   597       607      
                                            556-MSE     568-MSE    579-MSE     591-MSE

Chain D from PDB  Type:PROTEIN  Length:76
                                                                                                            
               SCOP domains d4ived_ D: automated matches                                                 SCOP domains
               CATH domains ---------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------- Transcript
                 4ive D 538 ETLTASRLASAPPQKQKQmLGERLFPLIQAmHPTLAGKITGmLLEIDNSELLYmLESPESLRSKVDEAVAVLQAHQ 613
                                   547       557       567|      577 |     587   |   597       607      
                                            556-MSE     568-MSE    579-MSE     591-MSE

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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 4)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (7, 7)

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