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(-) Description

Title :  P21 CRYSTAL FORM OF FKBP12.6
 
Authors :  H. Chen, S. M. Mustafi, H. M. Li, D. M. Lemaster, G. Hernandez
Date :  10 Jan 13  (Deposition) - 15 Jan 14  (Release) - 29 Apr 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Fkbp12. 6, Isomerase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Chen, S. M. Mustafi, D. M. Lemaster, Z. Li, A. Heroux, H. Li, G. Hernandez
Crystal Structure And Conformational Flexibility Of The Unligated Fk506-Binding Protein Fkbp12. 6.
Acta Crystallogr. , Sect. D V. 70 636 2014
PubMed-ID: 24598733  |  Reference-DOI: 10.1107/S1399004713032112

(-) Compounds

Molecule 1 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP1B
    Chains: A, B
    EC Number: 5.2.1.8
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: FKBP1B, FKBP12.6, FKBP1L, FKBP9, OTK4
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: PPIASE FKBP1B, 12.6 KDA FK506-BINDING PROTEIN, 12.6 KDA FKBP, FKBP-12.6, FK506-BINDING PROTEIN 1B, FKBP-1B, IMMUNOPHILIN FKBP12.6, ROTAMASE, H-FKBP-12

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1MLA1Ligand/IonMALONIC ACID
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1MLA1Ligand/IonMALONIC ACID
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1MLA-1Ligand/IonMALONIC ACID

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPRO A:78 , ASP A:79 , GLY A:83 , ALA A:84 , HOH A:333 , HOH A:339 , HOH A:413 , ALA B:84 , THR B:85 , HOH B:211 , HOH B:254BINDING SITE FOR RESIDUE MLA A 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4IQ2)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4IQ2)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4IQ2)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4IQ2)

(-) Exons   (0, 0)

(no "Exon" information available for 4IQ2)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains d4iq2a_ A: automated matches                                                                                SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee............eeeeeeeeee....eeee.......eeee......hhhhhhhhh......eeeeee.hhhh...............eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 4iq2 A   1 GVEIETISPGDGRTFPKKGQTVVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTITPDVAYGATGHPGVIPPNATLIFDVELLNLE 107
                                    10        20        30        40        50        60        70        80        90       100       


Chain B from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains d4iq2b_ B: automated matches                                                                                SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee............eeeeeeeeee....eeee.......eeee......hhhhhhhhhh.....eeeeee.hhhh...............eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 4iq2 B   1 GVEIETISPGDGRTFPKKGQTVVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTITPDVAYGATGHPGVIPPNATLIFDVELLNLE 107
                                    10        20        30        40        50        60        70        80        90       100
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4IQ2)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4IQ2)

(-) Gene Ontology  (50, 50)

Asymmetric Unit(hide GO term definitions)

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  FKB1B_HUMAN | P68106
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FKB1B_HUMAN | P68106: 1c9h 4c02 4iqc 5hkg 5t15 5t9m 5t9n 5t9r 5t9s 5t9v 5ta3 5tal 5tam 5tan 5tap 5taq 5tas 5tat 5tau 5tav 5taw 5tax 5tay 5taz 5tb0 5tb1 5tb2 5tb3 5tb4

(-) Related Entries Specified in the PDB File

4iqc