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(-) Description

Title :  CRYSTAL STRUCTURE OF ADAPTOR PROTEIN COMPLEX 3 (AP-3) MU3A SUBUNIT C-TERMINAL DOMAIN, IN COMPLEX WITH A SORTING PEPTIDE FROM TGN38
 
Authors :  G. A. Mardones, D. P. Kloer, P. V. Burgos, J. S. Bonifacino, J. H. Hurley
Date :  26 Dec 12  (Deposition) - 20 Feb 13  (Release) - 28 Aug 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.85
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Immunoglobulin-Like Beta-Sandwich, Signal Recognition, Cytosolic Tail Of Transmembrane Proteins, Adaptor Protein, Protein Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. A. Mardones, P. V. Burgos, Y. Lin, D. P. Kloer, J. G. Magadan, J. H. Hurley, J. S. Bonifacino
Structural Basis For The Recognition Of Tyrosine-Based Sorting Signals By The Mu 3A Subunit Of The Ap-3 Adaptor Complex.
J. Biol. Chem. V. 288 9563 2013
PubMed-ID: 23404500  |  Reference-DOI: 10.1074/JBC.M113.450775

(-) Compounds

Molecule 1 - AP-3 COMPLEX SUBUNIT MU-1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PHIS-PARALLEL-1
    Expression System Strain: B834(DE3)PLYSS
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID - MONOCYSTRONIC
    Fragment: C-TERMINUS, RESIDUES 165-418
    Gene: AP3M1
    Organism Common: BROWN RAT,RAT,RATS
    Organism Scientific: RATTUS NORVEGICUS
    Organism Taxid: 10116
    Synonym: AP-3 ADAPTER COMPLEX MU3A SUBUNIT, ADAPTER-RELATED PROTEIN COMPLEX 3 MU-1 SUBUNIT, CLATHRIN ASSEMBLY PROTEIN ASSEMBLY PROTEIN COMPLEX 1 MEDIUM CHAIN HOMOLOG 1, CLATHRIN COAT ASSEMBLY PROTEIN AP47 HOMOLOG 1, CLATHRIN COAT-ASSOCIATED PROTEIN AP47 HOMOLOG 1, GOLGI ADAPTOR AP-1 47 KDA PROTEIN HOMOLOG 1, HA1 47 KDA SUBUNIT HOMOLOG 1, MU-ADAPTIN 3A, MU3A-ADAPTIN, P47A
 
Molecule 2 - TRANS-GOLGI NETWORK INTEGRAL MEMBRANE PROTEIN TGN38
    Chains: B
    Engineered: YES
    Fragment: C-TERMINUS, RESIDUES 348-353
    Organism Common: BROWN RAT,RAT,RATS
    Organism Scientific: RATTUS NORVEGICUS
    Organism Taxid: 10116
    Other Details: SYNTHETIC PEPTIDE
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric/Biological Unit
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Chain A from PDB  Type:PROTEIN  Length:249
                                                                                                                                                                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeeeeeeeee.....eeeeeeeeeeeeeee.....eeeeee.hhh.eeeeee....hhhhhhhhheeee....eeeeeeeeee.........eeeeeeee...eeeeeeeeee.......eeeeeeeee....eeeeeeee...eeee.....eeeeeee........eeeeeeee.........eeeeeeee........eeeeeee......eeeeeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ikn A 164 FIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRLLDDVSFHPCIRFKRWESERVLSFIPPDGNFRLISYRVSSQNLVAIPVYVKHNISFSSCGRFDITIGPKQNMGKTIEGITVTVHMPKVVLNMNLTPTQGSYTFDPVTKVLAWDVGKITPQKLPSLKGLVNLQSGPEENPNLNIQFKIQQLAISGLKVNRLDMYGEKYKPFKGVKYITKAGKFQVRT 418
                                   173       183       193       203       213       223       233       243       253       263       273       286       296       306       316       326       336       346       356      |369       379       389       399       409         
                                                                                                                                                282|                                                                          363|                                                   
                                                                                                                                                 286                                                                           367                                                   


Chain B from PDB  Type:PROTEIN  Length:5
                                     
               SCOP domains ----- SCOP domains
               CATH domains ----- CATH domains
               Pfam domains ----- Pfam domains
         Sec.struct. author ..ee. Sec.struct. author
                 SAPs(SNPs) ----- SAPs(SNPs)
                    PROSITE ----- PROSITE
                 Transcript ----- Transcript
                 4ikn B   1 DYQRL   5
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 Classification and Annotation

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