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(-) Description

Title :  BEL BETA-TREFOIL APO CRYSTAL FORM 3
 
Authors :  M. Bovi, L. Cenci, M. Perduca, S. Capaldi, M. E. Carrizo, L. Civiero, L. R. Chiarelli, M. Galliano, H. L. Monaco
Date :  28 Nov 12  (Deposition) - 24 Apr 13  (Release) - 24 Apr 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.51
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Biol. Unit 2:  A  (1x)
Keywords :  Lectin, Fruiting Bodies, Sugar Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Bovi, L. Cenci, M. Perduca, S. Capaldi, M. E. Carrizo, L. Civiero, L. R. Chiarelli, M. Galliano, H. L. Monaco
Bel {Beta}-Trefoil: A Novel Lectin With Antineoplastic Properties In King Bolete (Boletus Edulis) Mushrooms.
Glycobiology V. 23 578 2013
PubMed-ID: 23213111  |  Reference-DOI: 10.1093/GLYCOB/CWS164

(-) Compounds

Molecule 1 - BEL-BETA TREFOIL
    Chains: A
    Organism Common: KING BOLETE MUSHROOM
    Organism Scientific: BOLETUS EDULIS
    Organism Taxid: 36056

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A
Biological Unit 2 (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric Unit (1, 3)
No.NameCountTypeFull Name
1GOL3Ligand/IonGLYCEROL
Biological Unit 1 (1, 6)
No.NameCountTypeFull Name
1GOL6Ligand/IonGLYCEROL
Biological Unit 2 (1, 3)
No.NameCountTypeFull Name
1GOL3Ligand/IonGLYCEROL

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR A:25 , ARG A:27 , TYR A:37 , TYR A:42 , ASP A:44 , GLN A:45 , PHE A:136 , ASP A:137 , HOH A:343BINDING SITE FOR RESIDUE GOL A 201
2AC2SOFTWAREPHE A:72 , ARG A:74 , TYR A:90 , ASP A:92 , ASN A:93 , HOH A:443 , HOH A:455BINDING SITE FOR RESIDUE GOL A 202
3AC3SOFTWARETYR A:37 , TYR A:119 , ARG A:121 , PHE A:136 , ASP A:138 , GLN A:139 , HOH A:422BINDING SITE FOR RESIDUE GOL A 203

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4I4Q)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric Unit
No.Residues
1Asp A:31 -Pro A:32
2Ser A:78 -Pro A:79
3Ala A:125 -Pro A:126

 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:146
                                                                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............eeeee.....eeee.......eeee....hhhh.eeeee.hhhhh..eeeee.....eeee.......eeee.....hhhh.eeeee.......eeeee....eeeee.......eeee....hhhh.eeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4i4q A   1 VNFPNIPAEGVRFRLRARDSGYVIYSRTENDPLVWHYNGPPYDDQLFTLIHGTGSRLNLYAIKSVPNGRVLFSRNSASPTVGNIVGDGTYNDNWFQFIQDDNDANSFRIYSLASDSVLYSRTTGAPQFGNYTGPKFDDQLWHFEIV 146
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) Related Entries Specified in the PDB File

4i4o 4i4p 4i4r 4i4s 4i4u 4i4v 4i4x 4i4y