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(-) Description

Title :  CRYSTAL STRUCTURE OF EUKARYOTIC HSLV FROM TRYPANOSOMA BRUCEI
 
Authors :  K. H. Sung, S. Y. Lee, H. K. Song
Date :  22 Oct 12  (Deposition) - 10 Jul 13  (Release) - 28 Aug 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.60
Chains :  Asym. Unit :  A,B,C
Biol. Unit 1:  A,B,C  (4x)
Keywords :  Mitochondria, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. H. Sung, S. Y. Lee, H. K. Song
Structural And Biochemical Analyses Of The Eukaryotic Heat Shock Locus V (Hslv) From Trypanosoma Brucei.
J. Biol. Chem. V. 288 23234 2013
PubMed-ID: 23818520  |  Reference-DOI: 10.1074/JBC.M113.484832

(-) Compounds

Molecule 1 - HSLVU COMPLEX PROTEOLYTIC SUBUNIT, PUTATIVE
    Chains: A, B, C
    EC Number: 3.4.25.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: TB11.01.2000
    Organism Scientific: TRYPANOSOMA BRUCEI BRUCEI
    Organism Taxid: 999953
    Strain: 927/4 GUTAT10.1

 Structural Features

(-) Chains, Units

  123
Asymmetric Unit : ABC
Biological Unit 1 (4x): ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric Unit (1, 3)
No.NameCountTypeFull Name
1MG3Ligand/IonMAGNESIUM ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETHR A:157 , ASP A:160 , SER A:163BINDING SITE FOR RESIDUE MG A 200
2AC2SOFTWARETHR B:157 , ASP B:160 , SER B:163BINDING SITE FOR RESIDUE MG B 200
3AC3SOFTWARETHR C:157 , ASP C:160 , SER C:163BINDING SITE FOR RESIDUE MG C 200

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4HO7)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4HO7)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4HO7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4HO7)

(-) Exons   (0, 0)

(no "Exon" information available for 4HO7)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:173
                                                                                                                                                                                                             
               SCOP domains d4ho7a_ A: automated matches                                                                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee..eeeeeee..eee...eeee.....eee....eeeeeeehhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh..eeeeeee...eeeee....ee......eeee..hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh......eeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ho7 A   1 TTILSVRKGDTVVLLGDRQVTLGERIVAKSSACKLRRINDDVVIGFAGSTADAISLMEKLENKIGEFPNQLTRAAVELAKEWRTDRALRRLEASLIVCSAEETLEIDGQGNVITPEADGIVAIGSGGTFAKAAARALIDVDGYDAEKIARKAMRIATDIDVFSNEHWDVEVLE 173
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170   


Chain B from PDB  Type:PROTEIN  Length:173
                                                                                                                                                                                                             
               SCOP domains d4ho7b_ B: automated matches                                                                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee..eeeeeee..eee...eeee.....eee....eeeeeeehhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh..eeeeeee...eeeee....ee......eeee..hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh......eeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ho7 B   1 TTILSVRKGDTVVLLGDRQVTLGERIVAKSSACKLRRINDDVVIGFAGSTADAISLMEKLENKIGEFPNQLTRAAVELAKEWRTDRALRRLEASLIVCSAEETLEIDGQGNVITPEADGIVAIGSGGTFAKAAARALIDVDGYDAEKIARKAMRIATDIDVFSNEHWDVEVLE 173
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170   


Chain C from PDB  Type:PROTEIN  Length:173
                                                                                                                                                                                                             
               SCOP domains d4ho7c_ C: automated matches                                                                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee..eeeeeee..eee...eeee.....eee....eeeeeeehhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh..eeeeeee...eeeee....ee......eeee..hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh......eeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ho7 C   1 TTILSVRKGDTVVLLGDRQVTLGERIVAKSSACKLRRINDDVVIGFAGSTADAISLMEKLENKIGEFPNQLTRAAVELAKEWRTDRALRRLEASLIVCSAEETLEIDGQGNVITPEADGIVAIGSGGTFAKAAARALIDVDGYDAEKIARKAMRIATDIDVFSNEHWDVEVLE 173
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 3)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4HO7)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4HO7)

(-) Gene Ontology  (15, 15)

Asymmetric Unit(hide GO term definitions)

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  HSLV_TRYB2 | Q383Q5
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 Related Entries

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UniProtKB/Swiss-Prot
        HSLV_TRYB2 | Q383Q5: 4hnz

(-) Related Entries Specified in the PDB File

4hnz THE OTHER CRYSTAL FROM FROM SAME PROTEIN.