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(-) Description

Title :  CRYSTAL STRUCTURE OF A PUTATIVE D-GLUCARATE DEHYDRATASE FROM PSEUDOMONAS MENDOCINA YMP
 
Authors :  R. P. Hegde, R. Toro, S. K. Burley, S. C. Almo, U. A. Ramagopal, New York Structural Genomics Research Consortium (Nysgrc)
Date :  19 Oct 12  (Deposition) - 07 Nov 12  (Release) - 26 Aug 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B,C,D  (1x)
Biol. Unit 2:  E,F,G,H  (1x)
Keywords :  Structural Genomics, Psi-Biology, Protein Structure Initiative, New York Structural Genomics Research Consortium, Nysgrc, Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. P. Hegde, R. Toro, S. K. Burley, S. C. Almo, U. A. Ramagopal
Crystal Structure Of A Putative D-Glucarate Dehydratase Fro Pseudomonas Mendocina Ymp
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - D-GLUCARATE DEHYDRATASE
    Chains: A, B, C, D, E, F, G, H
    EC Number: 4.2.1.40
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: BC-PSGX4(BC)
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: PMEN_1214
    Organism Scientific: PSEUDOMONAS MENDOCINA
    Organism Taxid: 399739
    Strain: YMP

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): ABCD    
Biological Unit 2 (1x):     EFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 121)

Asymmetric Unit (2, 121)
No.NameCountTypeFull Name
1GOL9Ligand/IonGLYCEROL
2MSE112Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (2, 61)
No.NameCountTypeFull Name
1GOL5Ligand/IonGLYCEROL
2MSE56Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (2, 60)
No.NameCountTypeFull Name
1GOL4Ligand/IonGLYCEROL
2MSE56Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (9, 9)

Asymmetric Unit (9, 9)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLN A:16 , VAL A:17 , ARG A:64 , MSE A:425 , HIS A:428 , HOH A:684 , ARG E:71 , ILE E:75BINDING SITE FOR RESIDUE GOL A 501
2AC2SOFTWAREASN A:29 , HIS A:34 , PHE A:169 , ASN A:358 , ASN A:359 , HIS A:385 , ARG A:439 , HOH A:688BINDING SITE FOR RESIDUE GOL A 502
3AC3SOFTWAREASN B:29 , HIS B:34 , PHE B:169 , ASN B:358 , ASN B:359 , HIS B:385 , ARG B:439BINDING SITE FOR RESIDUE GOL B 501
4AC4SOFTWAREASN C:29 , HIS C:34 , PHE C:169 , ASN C:358 , ASN C:359 , HIS C:385 , ARG C:439BINDING SITE FOR RESIDUE GOL C 501
5AC5SOFTWAREASN D:29 , HIS D:34 , PHE D:169 , ASN D:358 , ASN D:359 , HIS D:385 , ARG D:439BINDING SITE FOR RESIDUE GOL D 501
6AC6SOFTWAREHIS E:34 , PHE E:169 , ASN E:358 , ASN E:359 , HIS E:385 , ARG E:439BINDING SITE FOR RESIDUE GOL E 501
7AC7SOFTWAREHIS F:34 , PHE F:169 , ASN F:358 , ASN F:359 , HIS F:385 , ARG F:439BINDING SITE FOR RESIDUE GOL F 501
8AC8SOFTWAREASN G:29 , HIS G:34 , PHE G:169 , ASN G:358 , ASN G:359 , HIS G:385 , ARG G:439BINDING SITE FOR RESIDUE GOL G 501
9AC9SOFTWAREHIS H:34 , PHE H:169 , ASN H:358 , ASN H:359 , HIS H:385 , ARG H:439BINDING SITE FOR RESIDUE GOL H 501

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4HN8)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4HN8)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4HN8)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4HN8)

(-) Exons   (0, 0)

(no "Exon" information available for 4HN8)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:427
                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains d4hn8a1 A:8-154 automated matches                                                                                     d4hn8a2 A:155-463 automated matches                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeeeeeee....ee..ee...eeeeeeeeeee....eeeeeee.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh.hhhhhh.......eee..eeee...hhhhh............hhhhhh.....hhhhhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhh........ee.........hhhhhhhhhhhhhh..eee.....hhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh..........hhhhhh...............eee...........hhhhhhhhhhhhhhhh.....hhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hn8 A   8 STPRIVDmQVIPVAGRDSmLLNLCGAHAPYFTRNLVLLKDNAGRTGCGEVPGGEGIRQALERCRERVIGQSVGRYNRVLNDLRQAIALRLDNVITAVEAALLDLLGQHLEVPVAELLGSGQQRQRVPmLAYLFYIGERQRADLPYLAGKGSADDWYHLRHQAALTPDAIARLAEAARARYGFADFKLKGGVmRGAEEmEAIRAIKARFPDARVTLDPNGAWSLDEAIALCKGQGHVLAYAEDPCGPENGYSGREVmAEFKRATGIPTATNmVATDWRQmGHSLRLEAVDIPLADPHFWTmQGAVRLGQVCEEFGLTWGSHSNNHFDISLAmFTHAAAAVPGRITAIDTHWIWQEGEERLTREPLRIVGGQVQVPDKPGLGIEPDmQRImAAHELYKKVASGARDDAmAmQYLVPGWQYHPKRPSLGR 463
                                   |17        27        37        47        57        67        77        87      |126       136       146       156       166       176       186       196       206       216       226 |     236       246       256       266       276       286     | 296       306|      316       326       336       346       356       366|      376       386       396       406       416    |  426       436      |446       456       
                                  15-MSE     26-MSE                                                              94|                                     164-MSE                                                         228-MSE |                                                       292-MSE        307-MSE 315-MSE              336-MSE                        367-MSE                                               421-MSE               443-MSE                
                                                                                                                 124                                                                                                           234-MSE                                                                                                                                                                                        425-MSE             445-MSE              


Chain B from PDB  Type:PROTEIN  Length:426
                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains d4hn8b1 B:8-154 automated matches                                                                                    d4hn8b2 B:155-463 automated matches                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eeeeeeeeeeee....ee..ee...eeeeeeeeeee....eeeeeee.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh.hhhhhh.......eee..eee....hhhhh............hhhhhh.....hhhhhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhh.......eee.........hhhhhhhhhhhhhh..eee.....hhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh..........hhhhhh...........ee..eee...........hhhhhhhhhhhhhhhh.....hhhhhh................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4hn8 B   8 STPRIVDmQVIPVAGRDSmLLNLCGAHAPYFTRNLVLLKDNAGRTGCGEVPGGEGIRQALERCRERVIGQSVGRYNRVLNDLRQAIARLDNVITAVEAALLDLLGQHLEVPVAELLGSGQQRQRVPmLAYLFYIGERQRADLPYLAGKGSADDWYHLRHQAALTPDAIARLAEAARARYGFADFKLKGGVmRGAEEmEAIRAIKARFPDARVTLDPNGAWSLDEAIALCKGQGHVLAYAEDPCGPENGYSGREVmAEFKRATGIPTATNmVATDWRQmGHSLRLEAVDIPLADPHFWTmQGAVRLGQVCEEFGLTWGSHSNNHFDISLAmFTHAAAAVPGRITAIDTHWIWQEGEERLTREPLRIVGGQVQVPDKPGLGIEPDmQRImAAHELYKKVASGARDDAmAmQYLVPGWQYHPKRPSLGR 463
                                   |17        27        37        47        57        67        77        87      |127       137       147       157      |167       177       187       197       207       217       227|     |237       247       257       267       277       287    |  297       307       317       327       337       347       357       367       377       387       397       407       417   |   427       437     | 447       457      
                                  15-MSE     26-MSE                                                              94|                                    164-MSE                                                         228-MSE |                                                       292-MSE        307-MSE 315-MSE              336-MSE                        367-MSE                                               421-MSE               443-MSE                
                                                                                                                 125                                                                                                          234-MSE                                                                                                                                                                                        425-MSE             445-MSE              


Chain C from PDB  Type:PROTEIN  Length:427
                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains d4hn8c1 C:8-154 automated matches                                                                                     d4hn8c2 C:155-463 automated matches                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeeeeeee....ee..ee...eeeeeeeeeee....eeeeeee.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh.hhhhhh.......eee..eee....hhhhh............hhhhhh.....hhhhhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhh.......eee.........hhhhhhhhhhhhhh..eee.....hhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh..........hhhhhh...........ee..eee...........hhhhhhhhhhhhhhhh.....hhhhhh................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hn8 C   8 STPRIVDmQVIPVAGRDSmLLNLCGAHAPYFTRNLVLLKDNAGRTGCGEVPGGEGIRQALERCRERVIGQSVGRYNRVLNDLRQAIALRLDNVITAVEAALLDLLGQHLEVPVAELLGSGQQRQRVPmLAYLFYIGERQRADLPYLAGKGSADDWYHLRHQAALTPDAIARLAEAARARYGFADFKLKGGVmRGAEEmEAIRAIKARFPDARVTLDPNGAWSLDEAIALCKGQGHVLAYAEDPCGPENGYSGREVmAEFKRATGIPTATNmVATDWRQmGHSLRLEAVDIPLADPHFWTmQGAVRLGQVCEEFGLTWGSHSNNHFDISLAmFTHAAAAVPGRITAIDTHWIWQEGEERLTREPLRIVGGQVQVPDKPGLGIEPDmQRImAAHELYKKVASGARDDAmAmQYLVPGWQYHPKRPSLGR 463
                                   |17        27        37        47        57        67        77        87      |126       136       146       156       166       176       186       196       206       216       226 |     236       246       256       266       276       286     | 296       306|      316       326       336       346       356       366|      376       386       396       406       416    |  426       436      |446       456       
                                  15-MSE     26-MSE                                                              94|                                     164-MSE                                                         228-MSE |                                                       292-MSE        307-MSE 315-MSE              336-MSE                        367-MSE                                               421-MSE               443-MSE                
                                                                                                                 124                                                                                                           234-MSE                                                                                                                                                                                        425-MSE             445-MSE              


Chain D from PDB  Type:PROTEIN  Length:427
                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains d4hn8d1 D:8-154 automated matches                                                                                     d4hn8d2 D:155-463 automated matches                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeeeeeee...eee..ee...eeeeeeeeeee....eeeeeee.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh.hhhhhh.......eee..eeeeee.hhhhh............hhhhhh.....hhhhhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhh.......eee.........hhhhhhhhhhhhhh..eee.....hhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh..........hhhhhh...............eee...........hhhhhhhhhhhhhhhh.....hhhhhh................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hn8 D   8 STPRIVDmQVIPVAGRDSmLLNLCGAHAPYFTRNLVLLKDNAGRTGCGEVPGGEGIRQALERCRERVIGQSVGRYNRVLNDLRQAIALRLDNVITAVEAALLDLLGQHLEVPVAELLGSGQQRQRVPmLAYLFYIGERQRADLPYLAGKGSADDWYHLRHQAALTPDAIARLAEAARARYGFADFKLKGGVmRGAEEmEAIRAIKARFPDARVTLDPNGAWSLDEAIALCKGQGHVLAYAEDPCGPENGYSGREVmAEFKRATGIPTATNmVATDWRQmGHSLRLEAVDIPLADPHFWTmQGAVRLGQVCEEFGLTWGSHSNNHFDISLAmFTHAAAAVPGRITAIDTHWIWQEGEERLTREPLRIVGGQVQVPDKPGLGIEPDmQRImAAHELYKKVASGARDDAmAmQYLVPGWQYHPKRPSLGR 463
                                   |17        27        37        47        57        67        77        87      |126       136       146       156       166       176       186       196       206       216       226 |     236       246       256       266       276       286     | 296       306|      316       326       336       346       356       366|      376       386       396       406       416    |  426       436      |446       456       
                                  15-MSE     26-MSE                                                              94|                                     164-MSE                                                         228-MSE |                                                       292-MSE        307-MSE 315-MSE              336-MSE                        367-MSE                                               421-MSE               443-MSE                
                                                                                                                 124                                                                                                           234-MSE                                                                                                                                                                                        425-MSE             445-MSE              


Chain E from PDB  Type:PROTEIN  Length:426
                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------------------d4hn8e1 E:155-463 automated matches                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eeeeeeeeeeee....ee..ee...eeeeeeeeeee....eeeeeee.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh.hhhhh........eee..eee....hhhhh............hhhhhh.....hhhhhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhh.......eee.........hhhhhhhhhhhhhh..eee.....hhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh..........hhhhhh...............eee...........hhhhhhhhhhhhhhhh.....hhhhhh................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4hn8 E   8 STPRIVDmQVIPVAGRDSmLLNLCGAHAPYFTRNLVLLKDNAGRTGCGEVPGGEGIRQALERCRERVIGQSVGRYNRVLNDLRQAIARLDNVITAVEAALLDLLGQHLEVPVAELLGSGQQRQRVPmLAYLFYIGERQRADLPYLAGKGSADDWYHLRHQAALTPDAIARLAEAARARYGFADFKLKGGVmRGAEEmEAIRAIKARFPDARVTLDPNGAWSLDEAIALCKGQGHVLAYAEDPCGPENGYSGREVmAEFKRATGIPTATNmVATDWRQmGHSLRLEAVDIPLADPHFWTmQGAVRLGQVCEEFGLTWGSHSNNHFDISLAmFTHAAAAVPGRITAIDTHWIWQEGEERLTREPLRIVGGQVQVPDKPGLGIEPDmQRImAAHELYKKVASGARDDAmAmQYLVPGWQYHPKRPSLGR 463
                                   |17        27        37        47        57        67        77        87      |127       137       147       157      |167       177       187       197       207       217       227|     |237       247       257       267       277       287    |  297       307       317       327       337       347       357       367       377       387       397       407       417   |   427       437     | 447       457      
                                  15-MSE     26-MSE                                                              94|                                    164-MSE                                                         228-MSE |                                                       292-MSE        307-MSE 315-MSE              336-MSE                        367-MSE                                               421-MSE               443-MSE                
                                                                                                                 125                                                                                                          234-MSE                                                                                                                                                                                        425-MSE             445-MSE              


Chain F from PDB  Type:PROTEIN  Length:426
                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------------------d4hn8f1 F:155-463 automated matches                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eeeeeeeeeeee....ee..ee...eeeeeeeeeee...eeeeeeee.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh.hhhhh........eee..eee....hhhhh............hhhhhh.....hhhhhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhh.......eee.........hhhhhhhhhhhhhh..eee.....hhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh..........hhhhhh...............eee...........hhhhhhhhhhhhhhhh.....hhhhhh................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4hn8 F   8 STPRIVDmQVIPVAGRDSmLLNLCGAHAPYFTRNLVLLKDNAGRTGCGEVPGGEGIRQALERCRERVIGQSVGRYNRVLNDLRQAIARLDNVITAVEAALLDLLGQHLEVPVAELLGSGQQRQRVPmLAYLFYIGERQRADLPYLAGKGSADDWYHLRHQAALTPDAIARLAEAARARYGFADFKLKGGVmRGAEEmEAIRAIKARFPDARVTLDPNGAWSLDEAIALCKGQGHVLAYAEDPCGPENGYSGREVmAEFKRATGIPTATNmVATDWRQmGHSLRLEAVDIPLADPHFWTmQGAVRLGQVCEEFGLTWGSHSNNHFDISLAmFTHAAAAVPGRITAIDTHWIWQEGEERLTREPLRIVGGQVQVPDKPGLGIEPDmQRImAAHELYKKVASGARDDAmAmQYLVPGWQYHPKRPSLGR 463
                                   |17        27        37        47        57        67        77        87      |127       137       147       157      |167       177       187       197       207       217       227|     |237       247       257       267       277       287    |  297       307       317       327       337       347       357       367       377       387       397       407       417   |   427       437     | 447       457      
                                  15-MSE     26-MSE                                                              94|                                    164-MSE                                                         228-MSE |                                                       292-MSE        307-MSE 315-MSE              336-MSE                        367-MSE                                               421-MSE               443-MSE                
                                                                                                                 125                                                                                                          234-MSE                                                                                                                                                                                        425-MSE             445-MSE              


Chain G from PDB  Type:PROTEIN  Length:426
                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------------------d4hn8g1 G:155-463 automated matches                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eeeeeeeeeeee....ee..ee...eeeeeeeeeee....eeeeeee.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh.hhhhhh.......eee..eee....hhhhh............hhhhhh.....hhhhhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhh.......eee.........hhhhhhhhhhhhhh..eee.....hhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh..........hhhhhh...............eee...........hhhhhhhhhhhhhhhh.....hhhhhh................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4hn8 G   8 STPRIVDmQVIPVAGRDSmLLNLCGAHAPYFTRNLVLLKDNAGRTGCGEVPGGEGIRQALERCRERVIGQSVGRYNRVLNDLRQAIARLDNVITAVEAALLDLLGQHLEVPVAELLGSGQQRQRVPmLAYLFYIGERQRADLPYLAGKGSADDWYHLRHQAALTPDAIARLAEAARARYGFADFKLKGGVmRGAEEmEAIRAIKARFPDARVTLDPNGAWSLDEAIALCKGQGHVLAYAEDPCGPENGYSGREVmAEFKRATGIPTATNmVATDWRQmGHSLRLEAVDIPLADPHFWTmQGAVRLGQVCEEFGLTWGSHSNNHFDISLAmFTHAAAAVPGRITAIDTHWIWQEGEERLTREPLRIVGGQVQVPDKPGLGIEPDmQRImAAHELYKKVASGARDDAmAmQYLVPGWQYHPKRPSLGR 463
                                   |17        27        37        47        57        67        77        87      |127       137       147       157      |167       177       187       197       207       217       227|     |237       247       257       267       277       287    |  297       307       317       327       337       347       357       367       377       387       397       407       417   |   427       437     | 447       457      
                                  15-MSE     26-MSE                                                              94|                                    164-MSE                                                         228-MSE |                                                       292-MSE        307-MSE 315-MSE              336-MSE                        367-MSE                                               421-MSE               443-MSE                
                                                                                                                 125                                                                                                          234-MSE                                                                                                                                                                                        425-MSE             445-MSE              


Chain H from PDB  Type:PROTEIN  Length:427
                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains d4hn8h1 H:8-154 automated matches                                                                                     d4hn8h2 H:155-463 automated matches                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeeeeeee....ee..ee...eeeeeeeeeee....eeeeeee.hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh.hhhhhh.......eee..eee....hhhhh............hhhhhh.....hhhhhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhh........ee.........hhhhhhhhhhhhhh..eee.....hhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh..........hhhhhh...........ee..eee...........hhhhhhhhhhhhhhhh.....hhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hn8 H   8 STPRIVDmQVIPVAGRDSmLLNLCGAHAPYFTRNLVLLKDNAGRTGCGEVPGGEGIRQALERCRERVIGQSVGRYNRVLNDLRQAIALRLDNVITAVEAALLDLLGQHLEVPVAELLGSGQQRQRVPmLAYLFYIGERQRADLPYLAGKGSADDWYHLRHQAALTPDAIARLAEAARARYGFADFKLKGGVmRGAEEmEAIRAIKARFPDARVTLDPNGAWSLDEAIALCKGQGHVLAYAEDPCGPENGYSGREVmAEFKRATGIPTATNmVATDWRQmGHSLRLEAVDIPLADPHFWTmQGAVRLGQVCEEFGLTWGSHSNNHFDISLAmFTHAAAAVPGRITAIDTHWIWQEGEERLTREPLRIVGGQVQVPDKPGLGIEPDmQRImAAHELYKKVASGARDDAmAmQYLVPGWQYHPKRPSLGR 463
                                   |17        27        37        47        57        67        77        87      |126       136       146       156       166       176       186       196       206       216       226 |     236       246       256       266       276       286     | 296       306|      316       326       336       346       356       366|      376       386       396       406       416    |  426       436      |446       456       
                                  15-MSE     26-MSE                                                              94|                                     164-MSE                                                         228-MSE |                                                       292-MSE        307-MSE 315-MSE              336-MSE                        367-MSE                                               421-MSE               443-MSE                
                                                                                                                 124                                                                                                           234-MSE                                                                                                                                                                                        425-MSE             445-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 13)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4HN8)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4HN8)

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