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Title :   CRYSTAL STRUCTURE OF P450 BM3 5F5 HEME DOMAIN VARIANT COMPLEXED WITH STYRENE (DATASET II)

Authors :   A. Shehzad, S. Panneerselvam, M. Bocola, J. Mueller-Dieckmann, M. Wil U. Schwaneberg

Date :   08 Oct 12 (Deposition) - 01 May 13 (Release) - 08 May 13 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.50

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Oxidoreductase, P450 Bm3, Hemoprotein, Styrene Epoxidation, Inverted Enantioselectivity, Heme Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. Shehzad, S. Panneerselvam, M. Linow, M. Bocola, D. Roccatano, J. Mueller-Dieckmann, M. Wilmanns, U. Schwaneberg
P450 Bm3 Crystal Structures Reveal The Role Of The Charged Surface Residue Lys/Arg184 In Inversion Of Enantioselective Styrene Epoxidation.
Chem. Commun. (Camb. ) V. 49 4694 2013
PubMed-ID: 23589805 | Reference-DOI: 10.1039/C3CC39076D
(for further references see the PDB file header)

Molecule 1 - BIFUNCTIONAL P-450/NADPH-P450 REDUCTASE
	Chains	:	A, B
	EC Number	:	1.14.14.1, 1.6.2.4
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PETM11
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Fragment	:	HEME-BINDING DOMAIN
	Gene	:	CYP102, CYP102A1
	Mutation	:	YES
	Organism Scientific	:	BACILLUS MEGATERIUM
	Organism Taxid	:	1404
	Synonym	:	CYTOCHROME P450(BM-3), CYTOCHROME P450BM-3, CYTOCHROME P450 102, NADPH--CYTOCHROME P450 REDUCTASE

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (5, 11)

No.	Name	Count	Type	Full Name
1	GOL	5	Ligand/Ion	GLYCEROL
2	HEM	2	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
3	MES	1	Ligand/Ion	2-(N-MORPHOLINO)-ETHANESULFONIC ACID
4	PEG	1	Ligand/Ion	DI(HYDROXYETHYL)ETHER
5	SYN	2	Ligand/Ion	ETHENYLBENZENE

Biological Unit 1 (4, 6)

No.	Name	Count	Type	Full Name
1	GOL	3	Ligand/Ion	GLYCEROL
2	HEM	1	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
3	MES	-1	Ligand/Ion	2-(N-MORPHOLINO)-ETHANESULFONIC ACID
4	PEG	1	Ligand/Ion	DI(HYDROXYETHYL)ETHER
5	SYN	1	Ligand/Ion	ETHENYLBENZENE

Biological Unit 2 (4, 5)

No.	Name	Count	Type	Full Name
1	GOL	2	Ligand/Ion	GLYCEROL
2	HEM	1	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
3	MES	1	Ligand/Ion	2-(N-MORPHOLINO)-ETHANESULFONIC ACID
4	PEG	-1	Ligand/Ion	DI(HYDROXYETHYL)ETHER
5	SYN	1	Ligand/Ion	ETHENYLBENZENE

Asymmetric Unit (11, 11)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	LYS A:69 , LEU A:86 , ALA A:87 , TRP A:96 , PHE A:107 , ALA A:264 , GLY A:265 , THR A:268 , THR A:269 , THR A:327 , PHE A:331 , PRO A:392 , PHE A:393 , GLY A:394 , ARG A:398 , ALA A:399 , CYS A:400 , ILE A:401 , GLY A:402 , SYN A:502 , HOH A:603 , HOH A:604 , HOH A:605 , HOH A:606 , HOH A:639 , HOH A:782 , HOH A:1056	BINDING SITE FOR RESIDUE HEM A 501
02	AC2	SOFTWARE	LEU A:75 , ALA A:87 , ILE A:263 , ALA A:264 , THR A:268 , ALA A:328 , LEU A:437 , HEM A:501 , HOH A:782 , HOH A:1043 , HOH A:1056	BINDING SITE FOR RESIDUE SYN A 502
03	AC3	SOFTWARE	ASP A:68 , THR A:91 , HIS A:92 , TYR A:334 , LYS A:336 , HOH A:654	BINDING SITE FOR RESIDUE GOL A 503
04	AC4	SOFTWARE	GLN A:128 , GLU A:131 , ARG A:132 , HOH A:1051 , HOH A:1077 , ASP B:121 , ARG B:161	BINDING SITE FOR RESIDUE GOL A 504
05	AC5	SOFTWARE	TYR A:334 , ALA A:335 , LYS A:349 , GLY A:350 , HOH A:769 , HOH A:1023	BINDING SITE FOR RESIDUE PEG A 505
06	AC6	SOFTWARE	HIS A:100 , GLY A:396 , GLN A:397 , ALA A:399 , ILE A:401 , HOH A:639 , HOH A:1022	BINDING SITE FOR RESIDUE GOL A 506
07	AC7	SOFTWARE	ASP A:121 , ARG A:161 , GLN B:128 , ARG B:132 , HOH B:991	BINDING SITE FOR RESIDUE GOL B 501
08	AC8	SOFTWARE	LYS B:69 , LEU B:86 , ALA B:87 , TRP B:96 , PHE B:107 , ILE B:153 , ALA B:264 , GLY B:265 , THR B:268 , THR B:269 , THR B:327 , PHE B:331 , PRO B:392 , PHE B:393 , GLY B:394 , ARG B:398 , ALA B:399 , CYS B:400 , ILE B:401 , GLY B:402 , SYN B:503 , HOH B:604 , HOH B:613 , HOH B:630 , HOH B:640 , HOH B:659 , HOH B:993 , HOH B:1005	BINDING SITE FOR RESIDUE HEM B 502
09	AC9	SOFTWARE	LEU B:75 , ALA B:87 , ALA B:264 , THR B:268 , ALA B:328 , LEU B:437 , HEM B:502 , HOH B:993 , HOH B:1005	BINDING SITE FOR RESIDUE SYN B 503
10	BC1	SOFTWARE	ASP B:68 , THR B:91 , LYS B:336 , HOH B:724 , HOH B:932	BINDING SITE FOR RESIDUE GOL B 504
11	BC2	SOFTWARE	ILE B:366 , TRP B:367 , ARG B:375 , ILE B:385 , PRO B:386 , HOH B:684	BINDING SITE FOR RESIDUE MES B 505

(no "SS Bond" information available for 4HGI)

(no "Cis Peptide Bond" information available for 4HGI)

(no "SAP(SNP)/Variant" information available for 4HGI)

(no "PROSITE Motif" information available for 4HGI)

(no "Exon" information available for 4HGI)

Asymmetric Unit

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Chain A from PDB  Type:PROTEIN  Length:455
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains d4hgia_ A: Cytochrome P450 bm-3                                                                                                                                                                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhhhh..hhhhhhhhhhhhhh.eeeeee..eeeeee.hhhhhhhhh....eeee.hhhhhhhhhhhh.hhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......eehhhhhhhhhhhhhhhhhhh...hhhhh...hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh....eeeeee...eee...eee....eeeeehhhhh.hhhhhh......hhhhhhhhhhh.........hhhhh..hhhhhhhhhhhhhhhhhhheeee........eee...eee...eeeeee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hgi A   1 TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKFVRDFAGDGLATSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLAHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPL 455
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Chain B from PDB  Type:PROTEIN  Length:453
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
               SCOP domains d4hgib_ B: Cytochrome P450 bm-3                                                                                                                                                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhh..hhhhhhhhhhhhhh.eeeeee..eeeeee.hhhhhhhhh....eeee.hhhhhhhhhhhh.hhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......eehhhhhhhhhhhhhhhhhhh...hhhhh...hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh....eeeeee...eee...eee....eeeeehhhhh.hhhhhh......hhhhhhhhhhh.........hhhhh..hhhhhhhhhhhhhhhhhhheeee........eee...eee...eeeeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hgi B   3 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKFVRDFAGDGLATSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLAHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPL 455
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

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Class: All alpha proteins (14657)

Fold: Cytochrome P450 (480)

Superfamily: Cytochrome P450 (480)

Family: Cytochrome P450 (323)

Protein domain: Cytochrome P450 bm-3 (60)

Bacillus megaterium [TaxId: 1404] (60)

1a	d4hgia_	A:
1b	d4hgib_	B:

(no "CATH Domain" information available for 4HGI)

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1bu7	CRYOGENIC STRUCTURE OF CYTOCHROME P450BM-3 HEME DOMAIN
1jpz	CRYSTAL STRUCTURE OF A COMPLEX OF THE HEME DOMAIN OF P450BM -3 WITH N-PALMITOYLGLYCINE

Description

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Ligands, Modified Residues, Ions (5, 11)

Sites (11, 11)

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