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(-) Description

Title :  STRUCTURE OF PATELLAMIDE MATURATION PROTEASE PATA
 
Authors :  S. K. Nair, V. Agarwal
Date :  19 Sep 12  (Deposition) - 03 Oct 12  (Release) - 05 Dec 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym./Biol. Unit :  A
Keywords :  Protease, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  V. Agarwal, E. Pierce, J. Mcintosh, E. W. Schmidt, S. K. Nair
Structures Of Cyanobactin Maturation Enzymes Define A Famil Of Transamidating Proteases.
Chem. Biol. V. 19 1411 2012
PubMed-ID: 23177196  |  Reference-DOI: 10.1016/J.CHEMBIOL.2012.09.012

(-) Compounds

Molecule 1 - SUBTILISIN-LIKE PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28
    Expression System Strain: ROSETTA2(DE3)
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 513-866
    Gene: PATA
    Organism Scientific: PROCHLORON DIDEMNI
    Organism Taxid: 1216

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4H6V)

(-) Sites  (0, 0)

(no "Site" information available for 4H6V)

(-) SS Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1A:156 -A:158
2A:258 -A:269

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4H6V)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4H6V)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4H6V)

(-) Exons   (0, 0)

(no "Exon" information available for 4H6V)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:272
                                                                                                                                                                                                                                                                                                                
               SCOP domains d4h6va_ A: automated matches                                                                                                                                                                                                                                                     SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeee......hhhhh..eeee............hhhhhhhhhhh.............eeeeee.........hhhhhhhhhhhhhhh...eeee....ee.....hhhhhhhhhhhhhh..eeeee........eehhhhh...eeeeee............hhhhhhheeeee...eeee.....eeee.hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh..........hhhhh....hhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4h6v A  11 LKGDHNIRVAILDGPVDIAHPCFQGADLTVLPTLASDGFMSAHGTHVASIIFGQPETSVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGGELTDFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDDHGHPLDFSNWGSTYEQQGILAPGEDILGAKPGGGTERLSGTSFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDDAPEQARRCLAGRLNVSGAFTLLKGGN 287
                                    20        30        40    ||  55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285  
                                                             45|                                                                                                                                                                                                                                            
                                                              51
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4H6V)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4H6V)

(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q52QI9_PRODI | Q52QI9: 3zxx 3zxy

(-) Related Entries Specified in the PDB File

4h6w 4h6x