Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF TERNARY COMPLEX OF HUTP(HUTP-L-HIS-ZN)
 
Authors :  B. Dhakshnamoorthy, T. S. Misono, H. Mizuno, P. K. R. Kumar
Date :  17 Sep 12  (Deposition) - 04 Sep 13  (Release) - 10 Sep 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1:  A,B,C,J,K,L  (1x)
Biol. Unit 2:  D,E,F,G,H,I  (1x)
Keywords :  Hutp, Anti-Termination, Histidine Metabolism, Transcription, Transcription Regulation, Rna Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Dhakshnamoorthy, H. Mizuno, P. K. R. Kumar
Alternative Binding Modes Of L-Histidine Guided By Metal Ions For The Activation Of The Antiterminator Protein Hutp Of Bacillus Subtilis.
J. Struct. Biol. V. 183 512 2013
PubMed-ID: 23748184  |  Reference-DOI: 10.1016/J.JSB.2013.05.019

(-) Compounds

Molecule 1 - HUT OPERON POSITIVE REGULATORY PROTEIN
    Chains: A, B, C, D, E, F, G, H, I, J, K, L
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET5A
    Expression System Strain: 562
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: BSU39340, HUTP
    Mutation: YES
    Organism Scientific: BACILLUS SUBTILIS
    Organism Taxid: 224308
    Strain: 168

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDEFGHIJKL
Biological Unit 1 (1x): ABC      JKL
Biological Unit 2 (1x):    DEFGHI   

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 24)

Asymmetric Unit (2, 24)
No.NameCountTypeFull Name
1HIS12Mod. Amino AcidHISTIDINE
2ZN12Ligand/IonZINC ION
Biological Unit 1 (1, 6)
No.NameCountTypeFull Name
1HIS6Mod. Amino AcidHISTIDINE
2ZN-1Ligand/IonZINC ION
Biological Unit 2 (1, 6)
No.NameCountTypeFull Name
1HIS6Mod. Amino AcidHISTIDINE
2ZN-1Ligand/IonZINC ION

(-) Sites  (24, 24)

Asymmetric Unit (24, 24)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETYR A:69 , HIS A:73 , TYR A:76 , HIS A:77 , ZN A:202 , ARG B:88 , LEU B:97 , ARG B:98 , GLY B:130 , ALA B:131 , HIS B:138BINDING SITE FOR RESIDUE HIS A 201
02AC2SOFTWAREHIS A:73 , HIS A:77 , HIS A:201 , HIS B:138BINDING SITE FOR RESIDUE ZN A 202
03AC3SOFTWARETYR B:69 , TYR B:76 , HIS B:77 , ZN B:202 , ARG C:88 , LEU C:97 , ARG C:98 , GLY C:130 , ALA C:131 , HIS C:138BINDING SITE FOR RESIDUE HIS B 201
04AC4SOFTWAREHIS B:73 , HIS B:77 , HIS B:201 , HIS C:138BINDING SITE FOR RESIDUE ZN B 202
05AC5SOFTWARELEU A:97 , ARG A:98 , GLY A:130 , ALA A:131 , HIS A:138 , TYR C:69 , TYR C:76 , HIS C:77 , ZN C:202BINDING SITE FOR RESIDUE HIS C 201
06AC6SOFTWAREHIS A:138 , HIS C:73 , HIS C:77 , HIS C:201BINDING SITE FOR RESIDUE ZN C 202
07AC7SOFTWARETYR D:69 , HIS D:73 , TYR D:76 , HIS D:77 , ZN D:202 , LEU E:97 , ARG E:98 , GLY E:130 , ALA E:131 , HIS E:138BINDING SITE FOR RESIDUE HIS D 201
08AC8SOFTWAREHIS D:73 , HIS D:77 , HIS D:201 , HIS E:138BINDING SITE FOR RESIDUE ZN D 202
09AC9SOFTWAREARG D:88 , LEU D:97 , ARG D:98 , GLY D:130 , ALA D:131 , LEU D:136 , HIS D:138 , TYR F:69 , TYR F:76 , HIS F:77 , ZN F:202BINDING SITE FOR RESIDUE HIS D 203
10BC1SOFTWAREHIS E:73 , HIS E:77 , HIS F:138 , HIS F:201BINDING SITE FOR RESIDUE ZN E 201
11BC2SOFTWARETYR E:69 , TYR E:76 , HIS E:77 , ZN E:201 , ARG F:88 , LEU F:97 , ARG F:98 , ILE F:129 , GLY F:130 , ALA F:131 , HIS F:138BINDING SITE FOR RESIDUE HIS F 201
12BC3SOFTWAREHIS D:138 , HIS D:203 , HIS F:73 , HIS F:77 , HOH H:302BINDING SITE FOR RESIDUE ZN F 202
13BC4SOFTWARETYR G:69 , HIS G:73 , TYR G:76 , HIS G:77 , ZN G:202 , ARG H:88 , LEU H:97 , ARG H:98 , GLY H:130 , ALA H:131 , HIS H:138BINDING SITE FOR RESIDUE HIS G 201
14BC5SOFTWAREHIS G:73 , HIS G:77 , HIS G:201 , HIS H:138BINDING SITE FOR RESIDUE ZN G 202
15BC6SOFTWAREARG G:88 , LEU G:97 , ARG G:98 , ILE G:129 , GLY G:130 , HIS G:138 , TYR I:69 , HIS I:73 , TYR I:76 , HIS I:77 , ZN I:202BINDING SITE FOR RESIDUE HIS G 203
16BC7SOFTWAREHIS H:73 , HIS H:77 , HIS I:138 , HIS I:201BINDING SITE FOR RESIDUE ZN H 201
17BC8SOFTWARETYR H:69 , TYR H:76 , HIS H:77 , ZN H:201 , ARG I:88 , LEU I:97 , ARG I:98 , GLY I:130 , ALA I:131 , HIS I:138BINDING SITE FOR RESIDUE HIS I 201
18BC9SOFTWAREHIS G:138 , HIS G:203 , HIS I:73 , HIS I:77BINDING SITE FOR RESIDUE ZN I 202
19CC1SOFTWARETYR J:69 , TYR J:76 , HIS J:77 , ZN J:202 , ARG K:88 , LEU K:97 , ARG K:98 , GLY K:130 , ALA K:131 , HIS K:138BINDING SITE FOR RESIDUE HIS J 201
20CC2SOFTWAREHIS J:73 , HIS J:77 , HIS J:201 , HIS K:138BINDING SITE FOR RESIDUE ZN J 202
21CC3SOFTWAREARG J:88 , LEU J:97 , ARG J:98 , ILE J:129 , GLY J:130 , ALA J:131 , HIS J:138 , TYR L:69 , HIS L:77 , ZN L:202BINDING SITE FOR RESIDUE HIS J 203
22CC4SOFTWAREHIS K:73 , HIS K:77 , HIS L:138 , HIS L:201BINDING SITE FOR RESIDUE ZN K 201
23CC5SOFTWARETYR K:69 , TYR K:76 , HIS K:77 , ZN K:201 , ARG L:88 , LEU L:97 , ARG L:98 , GLY L:130 , ALA L:131 , HIS L:138BINDING SITE FOR RESIDUE HIS L 201
24CC6SOFTWAREHIS J:138 , HIS J:203 , HIS L:73 , HIS L:77BINDING SITE FOR RESIDUE ZN L 202

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4H4L)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4H4L)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4H4L)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4H4L)

(-) Exons   (0, 0)

(no "Exon" information available for 4H4L)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains d4h4la_ A: Hut operon positive regulatory protein HutP                                                                                           SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhh...hhhhhhhh..eeeeeeeee.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhh....hhhhh.eeeeeeeeeee....hhhhh.eeeeeeeeeee......eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4h4l A   2 TLHKERRIGRLSVLLLLNETQVEELERDGWKVCLGKVGSMDAHKVIAAIETASKKSGVIQSEGYRESHALYHATMEALHGVTRGEMLLGSLLRTVGLRFAVLRGNPYESEAEGDWIAVSLYGTIGAPIKGLEHETFGVGINHIH 201
                                    11        25        35        45        55        65        75        85        95       105       115       125       135       145  ||
                                             20|                                                                                                                        148|
                                              25                                                                                                                         201


Chain B from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains d4h4lb_ B: Hut operon positive regulatory protein HutP                                                                                           SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhh...hhhhhhhh.eeeeeeeee.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhh....hhhhh.eeeeeeeeeee..........eeeeeeeeeee......eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4h4l B   2 TLHKERRIGRLSVLLLLNEAQVEELERDGWKVCLGKVGSMDAHKVIAAIETASKKSGVIQSEGYRESHALYHATMEALHGVTRGEMLLGSLLRTVGLRFAVLRGNPYESEAEGDWIAVSLYGTIGAPIKGLEHETFGVGINHIH 201
                                    11        21|       35        45        55        65        75        85        95       105       115       125       135       145  ||
                                              21|                                                                                                                       148|
                                               26                                                                                                                        201


Chain C from PDB  Type:PROTEIN  Length:140
                                                                                                                                                                            
               SCOP domains d4h4lc_ C: Hut operon positive regulatory protein HutP                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh........eeeeeeeee.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhh....hhhhh.eeeeeeeeeee....hhhhh.eeeeeeeeeee......eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4h4l C   2 TLHKERRIGRLSVLLLLNEELERDGWKVCLGKVGSMDAHKVIAAIETASKKSGVIQSEGYRESHALYHATMEALHGVTRGEMLLGSLLRTVGLRFAVLRGNPYESEAEGDWIAVSLYGTIGAPIKGLEHETFGVGINHIH 201
                                    11        29        39        49        59        69        79        89        99       109       119       129       139       201
                                             20|                                                                                                                    148|
                                              29                                                                                                                     201


Chain D from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains d4h4ld_ D: Hut operon positive regulatory protein HutP                                                                                           SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhh...hhhhhhh..eeeeeeeee.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhh....hhhhh.eeeeeeeeeee....hhhhh.eeeeeeeeeee......eeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4h4l D   2 TLHKERRIGRLSVLLLLNEQVEELERDGWKVCLGKVGSMDAHKVIAAIETASKKSGVIQSEGYRESHALYHATMEALHGVTRGEMLLGSLLRTVGLRFAVLRGNPYESEAEGDWIAVSLYGTIGAPIKGLEHETFGVGINHIHH 203
                                    11        26        36        46        56        66        76        86        96       106       116       126       136       146 |||
                                             20|                                                                                                                       148||
                                              26                                                                                                                        201|
                                                                                                                                                                         203


Chain E from PDB  Type:PROTEIN  Length:143
                                                                                                                                                                               
               SCOP domains d4h4le_ E: Hut operon positive regulatory protein HutP                                                                                          SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhh...hhhhhhh..eeeeeeeee.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhh....hhhhh.eeeeeeeeeee..........eeeeeeeeeee......eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4h4l E   2 TLHKERRIGRLSVLLLLNEAQVEELERDGWKVCLGKVGSMDAHKVIAAIETASKKSGVIQSEGYRESHALYHATMEALHGVTRGEMLLGSLLRTVGLRFAVLRGNPYESEAEGDWIAVSLYGTIGAPIKGLEHETFGVGINHI 148
                                    11        21|       35        45        55        65        75        85        95       105       115       125       135       145   
                                              21|                                                                                                                          
                                               26                                                                                                                          


Chain F from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains d4h4lf_ F: Hut operon positive regulatory protein HutP                                                                                           SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh...hhhhhhh..eeeeeeeee.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhh....hhhhh.eeeeeeeeeee....hhhhh.eeeeeeeeeee......eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4h4l F   2 TLHKERRIGRLSVLLLLNEAQVEELERDGWKVCLGKVGSMDAHKVIAAIETASKKSGVIQSEGYRESHALYHATMEALHGVTRGEMLLGSLLRTVGLRFAVLRGNPYESEAEGDWIAVSLYGTIGAPIKGLEHETFGVGINHIH 201
                                    11        21|       35        45        55        65        75        85        95       105       115       125       135       145  ||
                                              21|                                                                                                                       148|
                                               26                                                                                                                        201


Chain G from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains d4h4lg_ G: Hut operon positive regulatory protein HutP                                                                                           SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhh...hhhhhhh....eeeeeee.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhh....hhhhh.eeeeeeeeeee....hhhhh.eeeeeeeeeee......eeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4h4l G   2 TLHKERRIGRLSVLLLLNEQVEELERDGWKVCLGKVGSMDAHKVIAAIETASKKSGVIQSEGYRESHALYHATMEALHGVTRGEMLLGSLLRTVGLRFAVLRGNPYESEAEGDWIAVSLYGTIGAPIKGLEHETFGVGINHIHH 203
                                    11        26        36        46        56        66        76        86        96       106       116       126       136       146 |||
                                             20|                                                                                                                       148||
                                              26                                                                                                                        201|
                                                                                                                                                                         203


Chain H from PDB  Type:PROTEIN  Length:143
                                                                                                                                                                               
               SCOP domains d4h4lh_ H: Hut operon positive regulatory protein HutP                                                                                          SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh...hhhhhh...eeeeeeeee.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhh....hhhhh.eeeeeeeeeee....hhhhh.eeeeeeeeeee......eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4h4l H   2 TLHKERRIGRLSVLLLLNEAQVEELERDGWKVCLGKVGSMDAHKVIAAIETASKKSGVIQSEGYRESHALYHATMEALHGVTRGEMLLGSLLRTVGLRFAVLRGNPYESEAEGDWIAVSLYGTIGAPIKGLEHETFGVGINHI 148
                                    11        21|       35        45        55        65        75        85        95       105       115       125       135       145   
                                              21|                                                                                                                          
                                               26                                                                                                                          


Chain I from PDB  Type:PROTEIN  Length:142
                                                                                                                                                                              
               SCOP domains d4h4li_ I: Hut operon positive regulatory protein HutP                                                                                         SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh..hhhhhh..eeeeeeeee.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhh....hhhhh.eeeeeeeeeee....hhhhh.eeeeeeeeeee......eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4h4l I   2 TLHKERRIGRLSVLLLLNEVEELERDGWKVCLGKVGSMDAHKVIAAIETASKKSGVIQSEGYRESHALYHATMEALHGVTRGEMLLGSLLRTVGLRFAVLRGNPYESEAEGDWIAVSLYGTIGAPIKGLEHETFGVGINHIH 201
                                    11        27        37        47        57        67        77        87        97       107       117       127       137       147||
                                             20|                                                                                                                      148|
                                              27                                                                                                                       201


Chain J from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains d4h4lj_ J: Hut operon positive regulatory protein HutP                                                                                           SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhh...hhhhhhh..eeee..eee.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhh....hhhhh.eeeeeeeeeee....hhhhh.eeeeeeeeeee......eeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4h4l J   2 TLHKERRIGRLSVLLLLNEQVEELERDGWKVCLGKVGSMDAHKVIAAIETASKKSGVIQSEGYRESHALYHATMEALHGVTRGEMLLGSLLRTVGLRFAVLRGNPYESEAEGDWIAVSLYGTIGAPIKGLEHETFGVGINHIHH 203
                                    11        26        36        46        56        66        76        86        96       106       116       126       136       146 |||
                                             20|                                                                                                                       148||
                                              26                                                                                                                        201|
                                                                                                                                                                         203


Chain K from PDB  Type:PROTEIN  Length:143
                                                                                                                                                                               
               SCOP domains d4h4lk_ K: Hut operon positive regulatory protein HutP                                                                                          SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh...hhhhhh...eeeeeeeee.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhh....hhhhh.eeeeeeeeeee....hhhhh.eeeeeeeeeee......eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4h4l K   2 TLHKERRIGRLSVLLLLNEAQVEELERDGWKVCLGKVGSMDAHKVIAAIETASKKSGVIQSEGYRESHALYHATMEALHGVTRGEMLLGSLLRTVGLRFAVLRGNPYESEAEGDWIAVSLYGTIGAPIKGLEHETFGVGINHI 148
                                    11        21|       35        45        55        65        75        85        95       105       115       125       135       145   
                                              21|                                                                                                                          
                                               26                                                                                                                          


Chain L from PDB  Type:PROTEIN  Length:143
                                                                                                                                                                               
               SCOP domains d4h4ll_ L: Hut operon positive regulatory protein HutP                                                                                          SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh...........eeeeeeeee.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhh....hhhhh.eeeeeeeeeee....hhhhh.eeeeeeeeeee......eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4h4l L   2 TLHKERRIGRLSVLLLLNEQVEELERDGWKVCLGKVGSMDAHKVIAAIETASKKSGVIQSEGYRESHALYHATMEALHGVTRGEMLLGSLLRTVGLRFAVLRGNPYESEAEGDWIAVSLYGTIGAPIKGLEHETFGVGINHIH 201
                                    11        26        36        46        56        66        76        86        96       106       116       126       136       146 ||
                                             20|                                                                                                                       148|
                                              26                                                                                                                        201
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 12)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0 ; only for superseded entry 2ZH0: 1,12)

(no "CATH Domain" information available for 4H4L, only for superseded entry 2ZH0 replaced by 4H4L)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4H4L)

(-) Gene Ontology  (6, 6)

Asymmetric Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    HIS  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    ZN  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
    CC2  [ RasMol ]  +environment [ RasMol ]
    CC3  [ RasMol ]  +environment [ RasMol ]
    CC4  [ RasMol ]  +environment [ RasMol ]
    CC5  [ RasMol ]  +environment [ RasMol ]
    CC6  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 4h4l)
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym. Unit PNG format | Asym. Unit - sites PNG format | Biol. Unit 1 PNG format | Biol. Unit 1 - sites PNG format | Biol. Unit 2 PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  4h4l
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  HUTP_BACSU | P10943
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  HUTP_BACSU | P10943
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HUTP_BACSU | P10943: 1vea 1wmq 1wps 1wpt 1wpu 1wpv 1wrn 1wro 1wrq 3boy

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4H4L)