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(-) Description

Title :  CRYSTAL STRUCTURE OF HISTIDINOL PHOSPHATE PHOSPHATASE (HISK) FROM LACTOCOCCUS LACTIS SUBSP. LACTIS IL1403 COMPLEXED WITH ZN, L-HISTIDINOL AND PHOSPHATE
 
Authors :  A. A. Fedorov, E. V. Fedorov, S Ghodge, F. M. Raushel, S. C. Almo
Date :  05 Sep 12  (Deposition) - 06 Feb 13  (Release) - 24 Jun 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.65
Chains :  Asym./Biol. Unit :  A
Keywords :  Php Fold, Histidinol Phosphate Phosphatase (Hisk), L-Histidinol, Phosphate, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. A. Fedorov, E. V. Fedorov, S Ghodge, F. M. Raushel, S. C. Almo
Crystal Structure Of Histidinol Phosphate Phosphatase (Hisk From Lactococcus Lactis Subsp. Lactis Il1403 Complexed With Zn, L-Histidinol And Phosphate
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HISTIDINOL-PHOSPHATASE
    Chains: A
    EC Number: 3.1.3.15
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: HISK, LL1216, L37351
    Mutation: YES
    Organism Scientific: LACTOCOCCUS LACTIS SUBSP. LACTIS
    Organism Taxid: 272623
    Strain: IL1403
    Synonym: HOLPASE

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 17)

Asymmetric/Biological Unit (6, 17)
No.NameCountTypeFull Name
1CL6Ligand/IonCHLORIDE ION
2HSO2Ligand/IonL-HISTIDINOL
3NA1Ligand/IonSODIUM ION
4PEG3Ligand/IonDI(HYDROXYETHYL)ETHER
5PO41Ligand/IonPHOSPHATE ION
6ZN4Ligand/IonZINC ION

(-) Sites  (17, 17)

Asymmetric Unit (17, 17)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:81 , HIS A:109 , HIS A:154 , ZN A:303 , PO4 A:312 , HOH A:619BINDING SITE FOR RESIDUE ZN A 301
02AC2SOFTWAREASP A:17 , HIS A:42 , HIS A:230 , PO4 A:312BINDING SITE FOR RESIDUE ZN A 302
03AC3SOFTWAREHIS A:9 , HIS A:11 , GLU A:81 , ASP A:228 , ZN A:301 , PO4 A:312 , HOH A:619BINDING SITE FOR RESIDUE ZN A 303
04AC4SOFTWAREHIS A:32 , HIS A:240 , CL A:306 , HSO A:314BINDING SITE FOR RESIDUE ZN A 304
05AC5SOFTWAREHIS A:13 , SER A:15 , SER A:18 , HOH A:421 , HOH A:438 , HOH A:627BINDING SITE FOR RESIDUE NA A 305
06AC6SOFTWAREHIS A:32 , HIS A:240 , ZN A:304 , HSO A:314BINDING SITE FOR RESIDUE CL A 306
07AC7SOFTWAREARG A:43 , TYR A:46BINDING SITE FOR RESIDUE CL A 307
08AC8SOFTWAREARG A:234 , ASP A:235 , HOH A:423BINDING SITE FOR RESIDUE CL A 308
09AC9SOFTWAREASN A:93 , PHE A:146 , GLU A:147 , HOH A:570BINDING SITE FOR RESIDUE CL A 309
10BC1SOFTWAREHIS A:230BINDING SITE FOR RESIDUE CL A 310
11BC2SOFTWARELYS A:4 , GLU A:253 , LEU A:254 , HOH A:611BINDING SITE FOR RESIDUE CL A 311
12BC3SOFTWAREHIS A:11 , ASP A:17 , HIS A:42 , GLU A:81 , HIS A:109 , TYR A:157 , ARG A:160 , ARG A:197 , ASP A:228 , HIS A:230 , ZN A:301 , ZN A:302 , ZN A:303 , HSO A:313 , HOH A:619BINDING SITE FOR RESIDUE PO4 A 312
13BC4SOFTWAREHIS A:109 , GLU A:115 , TYR A:157 , TYR A:161 , PO4 A:312 , HOH A:426 , HOH A:485BINDING SITE FOR RESIDUE HSO A 313
14BC5SOFTWARELYS A:5 , HIS A:32 , TYR A:46 , ARG A:87 , ASP A:113 , HIS A:240 , ARG A:243 , ZN A:304 , CL A:306 , HOH A:529BINDING SITE FOR RESIDUE HSO A 314
15BC6SOFTWAREPHE A:60 , LEU A:124BINDING SITE FOR RESIDUE PEG A 315
16BC7SOFTWAREARG A:183 , ALA A:186 , SER A:187 , GLU A:189 , HOH A:543BINDING SITE FOR RESIDUE PEG A 316
17BC8SOFTWAREGLN A:206 , SER A:209BINDING SITE FOR RESIDUE PEG A 317

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4GYF)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4GYF)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4GYF)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4GYF)

(-) Exons   (0, 0)

(no "Exon" information available for 4GYF)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:263
                                                                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....ee.............hhhhhhhhhhhhh..eeeeeeee...........hhhhhhhhhhhhhhhh....eeeeeeeee.hhhhhhhhhhhhhh....eeeee..ee..ee....hhhhh..hhhhhhhhhhhhhhhhhhhh....ee...hhhhhh.........hhhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhhhhhhhh....eeee........hhhhhhhhhhhhhhh.......ee..ee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4gyf A   2 SLKKLDYHFHSHFSADSEELPRKHVTEAIAHGLEEICFTEHRDFYFPGMDFSLNLPEYFQEINQLQAEFKDKIKIKIGLEMGIDLRFKSEINQFIDSAPFDFVIASVHEIGDIEVYDGTEFYLQKTKEEAQREYLLACLDVVQNFENYNSFGHLDYVARYGPYTDKSIKFAENREILFEILRALASKEKALEINTRLFDDPKTEQFYSDLLINFKRLGGKFITLGTDSHIAKRDWLSIHKARTLIKKAGFHELATFSGMKIDK 264
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4GYF)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4GYF)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4GYF)

(-) Gene Ontology  (10, 10)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HIS9_LACLA | Q02150: 4gc3 4gk8

(-) Related Entries Specified in the PDB File

4gk8 THE SAME PROTEIN COMPLEXED WITH WITH ZN AND L-HISTIDINOL ARSENATE