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(-) Description

Title :  THE CRYSTAL STRUCTURE OF A CONSERVED FUNCTIONALLY UNKNOWN PROTEIN FROM ANAEROCOCCUS PREVOTII DSM 20548
 
Authors :  K. Tan, H. Li, J. Bearden, A. Joachimiak, Midwest Center For Structu Genomics (Mcsg)
Date :  04 Sep 12  (Deposition) - 03 Oct 12  (Release) - 03 Oct 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.82
Chains :  Asym./Biol. Unit :  A
Keywords :  Structural Genomics, Psi-Biology, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Tan, H. Li, J. Bearden, A. Joachimiak
The Crystal Structure Of A Conserved Functionally Unknown Protein From Anaerococcus Prevotii Dsm 20548
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - A CONSERVED FUNCTIONALLY UNKNOWN PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG57
    Expression System Strain: BL21(DE3)MAGIC
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: APRE_0094
    Organism Common: PEPTOSTREPTOCOCCUS PREVOTII
    Organism Scientific: ANAEROCOCCUS PREVOTII
    Organism Taxid: 525919
    Strain: DSM 20548

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 16)

Asymmetric/Biological Unit (3, 16)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2MSE11Mod. Amino AcidSELENOMETHIONINE
3SO44Ligand/IonSULFATE ION

(-) Sites  (5, 5)

Asymmetric Unit (5, 5)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:135 , TYR A:136BINDING SITE FOR RESIDUE SO4 A 401
2AC2SOFTWARELYS A:304 , PHE A:328 , ASP A:329 , HIS A:330 , HOH A:720BINDING SITE FOR RESIDUE SO4 A 402
3AC3SOFTWAREARG A:98 , HOH A:660BINDING SITE FOR RESIDUE SO4 A 403
4AC4SOFTWAREARG A:7 , HOH A:508BINDING SITE FOR RESIDUE SO4 A 404
5AC5SOFTWAREASN A:46 , GLU A:55 , ARG A:339 , ARG A:364 , GLU A:382 , HOH A:615BINDING SITE FOR RESIDUE GOL A 405

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4GXT)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Gly A:310 -Pro A:311

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4GXT)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4GXT)

(-) Exons   (0, 0)

(no "Exon" information available for 4GXT)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:382
                                                                                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhhhhh..........eeeeee......ee.hhhhhhhhhhhhhh....hhhhhhhhhhh.......hhhhh.......hhhhhhhhhhhhhhhhhhhh........hhhhh.hhhhhhhhhhhhhhhhhh...........hhhhhhh..hhhhhhhhhhhhhhhhh....eeeeee...........eeeeee..eehhhhhhhhhhhhhh..eeeeeeeeehhhhhhhhhh.......hhh.eeee.eee.....eeeee........hhhhhhhhhhhh....ee...eeee.hhhhhhhhhhh....eeeee.....hhhhhhhhhhhh....eeee.ee....ee........... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4gxt A   1 mKTYIKRLNWEESIYLAINKLIAKHGKDNEAYNPDNKPFAVFDWDNTSIIGDVEEALLYYmVRNVSFKmDPEEFYELIRKNVDRKDYPKEFNNLDKQRVNIDLISQDIKRAYEKLYKNLDRFEGGKTLEEVQDTDYYQEFVSKmLYRYRASEFDPEAEDPYCWmSFLLKNYKTEEVYDLCKGAYASmKKERIRVEEFVSPDIKSEAGRISIKYFVGIRTLDEmVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKmKEEKVLGLRLmKDDEGKILPKFDKDFPISIREGKVQTINKLIKNDRNYGPImVGGDSDGDFAmLKEFDHTDLSLIIHRANSGLIDDLRQKAREGSLRYYSQGRNLLEASFVPSNKSEGYNE 382
                            |       10        20        30        40        50        60|       70        80        90       100       110       120       130       140   |   150       160   |   170       180      |190       200       210       220  |    230       240       250       260|      270 |     280       290       300       310  |    320   |   330       340       350       360       370       380  
                            |                                                          61-MSE  69-MSE                                                                    144-MSE             164-MSE                187-MSE                             223-MSE                               261-MSE    272-MSE                                  313-MSE    324-MSE                                                      
                            1-MSE
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4GXT)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4GXT)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4GXT)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 4GXT)

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    Gly A:310 - Pro A:311   [ RasMol ]  
 

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